##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545645_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1261332 Sequences flagged as poor quality 0 Sequence length 52 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.58773502931821 33.0 31.0 34.0 31.0 34.0 2 32.97846641486936 34.0 31.0 34.0 31.0 34.0 3 33.042403586050305 34.0 33.0 34.0 31.0 34.0 4 36.42089870073858 37.0 37.0 37.0 35.0 37.0 5 36.39528371594473 37.0 37.0 37.0 35.0 37.0 6 36.40804007192396 37.0 37.0 37.0 35.0 37.0 7 36.48512287010874 37.0 37.0 37.0 35.0 37.0 8 36.52978835072764 37.0 37.0 37.0 35.0 37.0 9 38.35306326962291 39.0 39.0 39.0 37.0 39.0 10 38.12438517376868 39.0 39.0 39.0 35.0 39.0 11 37.933581325138825 39.0 38.0 39.0 35.0 39.0 12 37.47748332714939 39.0 37.0 39.0 35.0 39.0 13 37.370801660466874 39.0 37.0 39.0 35.0 39.0 14 38.69788921552771 41.0 38.0 41.0 35.0 41.0 15 38.750822939559136 41.0 38.0 41.0 35.0 41.0 16 38.81204314169465 41.0 38.0 41.0 35.0 41.0 17 38.759554978387925 40.0 37.0 41.0 35.0 41.0 18 38.778459596680335 40.0 37.0 41.0 35.0 41.0 19 38.75666755461687 40.0 37.0 41.0 35.0 41.0 20 38.67766932100351 40.0 37.0 41.0 35.0 41.0 21 38.607991393225575 40.0 37.0 41.0 35.0 41.0 22 38.68819153085786 40.0 37.0 41.0 35.0 41.0 23 38.687304373471854 40.0 37.0 41.0 35.0 41.0 24 38.652814643567275 40.0 37.0 41.0 35.0 41.0 25 38.59618086277047 40.0 36.0 41.0 35.0 41.0 26 38.44830782062137 40.0 36.0 41.0 35.0 41.0 27 38.38401467654828 40.0 36.0 41.0 35.0 41.0 28 38.27400795349678 40.0 36.0 41.0 35.0 41.0 29 38.28968978825559 40.0 36.0 41.0 35.0 41.0 30 38.23363079664989 40.0 36.0 41.0 35.0 41.0 31 38.12644410829187 40.0 35.0 41.0 34.0 41.0 32 38.06125032901726 40.0 35.0 41.0 34.0 41.0 33 37.98902667973222 40.0 35.0 41.0 34.0 41.0 34 37.97813264073218 40.0 35.0 41.0 34.0 41.0 35 37.80596861096048 40.0 35.0 41.0 34.0 41.0 36 37.73122064611062 40.0 35.0 41.0 34.0 41.0 37 37.69287546815588 40.0 35.0 41.0 34.0 41.0 38 37.6555490544916 40.0 35.0 41.0 33.0 41.0 39 37.57838697503909 40.0 35.0 41.0 33.0 41.0 40 37.4297631392845 39.0 35.0 41.0 33.0 41.0 41 37.32821969156416 39.0 35.0 41.0 33.0 41.0 42 37.240582178205266 39.0 35.0 41.0 33.0 41.0 43 37.170614873800076 39.0 35.0 41.0 33.0 41.0 44 37.04991548616859 39.0 35.0 41.0 33.0 41.0 45 36.967944205015016 39.0 35.0 41.0 33.0 41.0 46 36.939586881170065 39.0 35.0 41.0 33.0 41.0 47 36.920193890268386 39.0 35.0 41.0 33.0 41.0 48 36.83691288257176 38.0 35.0 41.0 33.0 41.0 49 36.78114802446937 38.0 35.0 41.0 33.0 41.0 50 36.68131388088148 38.0 35.0 41.0 33.0 41.0 51 36.56807248210622 38.0 35.0 40.0 32.0 41.0 52 36.21077321434801 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 5.0 13 9.0 14 13.0 15 30.0 16 40.0 17 64.0 18 125.0 19 310.0 20 504.0 21 886.0 22 1281.0 23 1892.0 24 2686.0 25 3635.0 26 4654.0 27 5834.0 28 7530.0 29 9369.0 30 12165.0 31 15681.0 32 20618.0 33 28458.0 34 67921.0 35 164030.0 36 71566.0 37 100711.0 38 182370.0 39 558014.0 40 930.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.68113391240371 14.482467740452156 45.48897514690819 12.34742320023594 2 25.111786587512245 13.106620620106362 49.214084792901474 12.567507999479915 3 25.320058477863082 13.896341328056373 45.339688519755306 15.443911674325236 4 23.281102834146758 14.298852324368209 47.22380784757701 15.196236993908027 5 23.26667364341823 17.405726644531335 43.230093266483365 16.097506445567067 6 23.399073360542662 19.236727522967783 44.569550284936874 12.794648831552676 7 84.10259947420663 2.982006323473915 7.560182410340814 5.355211791978638 8 85.58206721148753 2.8980474609381193 7.557249003434465 3.9626363241398774 9 78.09482356746678 5.024767468041721 9.624666622269157 7.255742342222349 10 44.25504149581553 22.816673167730624 14.337065895418494 18.59121944103535 11 35.25645904488271 21.19188286668379 25.748177323654676 17.80348076477882 12 30.877516783844385 24.08969248381869 25.691649779756638 19.34114095258029 13 21.046877427988825 29.081320381945435 31.778151985361507 18.093650204704232 14 17.041667063073003 35.155692553586206 29.425638927736706 18.377001455604073 15 15.536274351241385 24.83905902648946 38.809766183685184 20.814900438583972 16 19.811833839147823 21.752242867064343 37.33275616570419 21.103167128083644 17 18.87266794150945 22.487655906613007 27.8670484852521 30.77262766662544 18 20.57301329071172 23.317492936039045 31.808992398512046 24.30050137473718 19 25.49083032857329 25.278118687229057 27.201323680046173 22.029727304151482 20 27.336260397738265 21.296534140099514 25.9887959712431 25.378409490919125 21 23.35499297567968 27.200213742297823 27.823760913066504 21.62103236895599 22 28.046224150342653 21.872353987689205 23.72063818249279 26.360783679475347 23 25.483060764334848 27.037766424700237 21.965985164889183 25.513187646075735 24 24.205839541056598 19.792330647283983 31.74865935376253 24.25317045789689 25 26.504996305492924 23.652218448433878 26.704626537660186 23.138158708413012 26 22.07277703253386 28.38546869499862 25.054466230936818 24.4872880415307 27 23.45583874824392 26.20515455090333 25.13501599895983 25.20399070189292 28 21.47277639828372 23.747197407185418 32.42310509841976 22.356921096111098 29 21.28622757529342 21.980017949279016 29.697811519885324 27.035942955542236 30 23.472804939540104 25.468076604732143 29.469481468796477 21.589636986931275 31 26.4395892596081 25.003329813245045 26.282929474555473 22.274151452591386 32 26.357533147498042 23.476451877856107 26.786365524699285 23.379649449946566 33 25.066596264900916 25.887950198678855 27.20552558723635 21.83992794918388 34 23.73348174786654 22.916012596207818 28.257667291403056 25.092838364522585 35 21.63276599658139 22.4184433598767 32.66142458924375 23.287366054298158 36 24.94149042440848 25.75364773112868 25.3631874875132 23.941674356949637 37 23.659750168869103 25.721300973891093 29.384729793583293 21.234219063656514 38 22.04740702685732 26.003621568310326 29.924080258012957 22.024891146819396 39 22.818972324495057 26.722544104169245 26.302274103883832 24.15620946745187 40 25.62917614077816 22.802481820805305 28.377144161886008 23.191197876530527 41 21.27948866753559 23.95689636035556 28.650268129247493 26.113346842861358 42 22.034404898948097 23.952456609362166 25.940672241725416 28.07246624996432 43 21.14169782420489 22.464030088826732 28.396964478820802 27.997307608147576 44 25.01379494058662 23.522038606806138 26.74648704702648 24.717679405580768 45 20.13347794236569 25.8469617832577 27.86023029622653 26.15932997815008 46 21.55618029194534 24.656949954492553 27.206873368787914 26.57999638477419 47 23.38202788797874 23.018285431591366 29.63953978809703 23.96014689233287 48 20.50530708806246 20.312732888723982 35.164334211769784 24.017625811443775 49 20.847167914553822 20.80927146857449 29.532747920452344 28.81081269641934 50 19.90982548607345 23.641356914753608 31.712348533137984 24.736469066034953 51 22.70678933064411 24.36590842062201 28.760944779011393 24.16635746972248 52 21.011993670183585 20.917569680306215 31.02228437873613 27.04815227077407 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 515.0 1 376.5 2 238.0 3 197.0 4 156.0 5 205.5 6 255.0 7 364.0 8 473.0 9 546.5 10 620.0 11 685.0 12 750.0 13 754.0 14 1172.5 15 1587.0 16 1414.0 17 1241.0 18 1482.5 19 1724.0 20 1891.5 21 2059.0 22 2248.0 23 2437.0 24 2848.5 25 3260.0 26 5456.0 27 7652.0 28 8338.5 29 9025.0 30 11563.0 31 14101.0 32 17308.0 33 20515.0 34 22266.5 35 24018.0 36 29271.0 37 34524.0 38 36677.5 39 48115.0 40 57399.0 41 73974.5 42 90550.0 43 96054.0 44 101558.0 45 121526.0 46 141494.0 47 142547.5 48 143601.0 49 125946.5 50 108292.0 51 93151.5 52 78011.0 53 72228.5 54 66446.0 55 62872.0 56 59298.0 57 56211.0 58 53124.0 59 52231.5 60 51339.0 61 48822.0 62 46305.0 63 38700.5 64 27234.0 65 23372.0 66 19825.0 67 16278.0 68 13454.0 69 10630.0 70 8483.0 71 6336.0 72 6028.5 73 5721.0 74 4263.0 75 2805.0 76 2111.0 77 1417.0 78 982.5 79 548.0 80 667.5 81 787.0 82 449.0 83 111.0 84 68.0 85 25.0 86 18.0 87 11.0 88 8.0 89 5.0 90 5.0 91 5.5 92 6.0 93 4.0 94 2.0 95 2.5 96 3.0 97 6.0 98 9.0 99 9.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1261332.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.31540719806368 #Duplication Level Percentage of deduplicated Percentage of total 1 67.00694565900311 10.26238657866158 2 12.186205256600912 3.7327339140805416 3 5.69419335325952 2.616266696090317 4 3.279116923579703 2.0088404373874007 5 2.0977253458874334 1.6063758930982508 6 1.4376495409276748 1.3210912876449994 7 1.0207627835966768 1.0943378378388444 8 0.7222428854719392 0.8849155109525777 9 0.5992172287998484 0.8259530273248472 >10 3.3866300124426347 10.11240614461332 >50 0.7318674897581999 8.257396837973083 >100 1.8167107305941943 52.55536989593128 >500 0.012957993798817366 1.2983847594862201 >1k 0.007256476527337724 2.8843733330846053 >5k 5.183197519526946E-4 0.5391678458321354 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGCTT 6792 0.5384783704845354 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGCT 4440 0.3520088287619754 No Hit TGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 4196 0.33266419943361464 No Hit GCCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 3849 0.3051535995281179 No Hit GTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 3824 0.3031715678346383 No Hit TTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 3257 0.2582190890265212 No Hit ATCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 2792 0.22135329952780078 No Hit GGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 2763 0.21905414276336443 No Hit AGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 2169 0.17196106972628936 No Hit ACCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 1998 0.15840397294288894 No Hit CCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGCT 1740 0.13794940586617957 No Hit TCCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 1705 0.13517456149530815 No Hit CTCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 1412 0.11194515004772732 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5649583139094227 0.0 2 0.0 0.0 0.0 1.2032518004775903 0.0 3 0.0 0.0 0.0 3.8193750733351726 0.0 4 0.0 0.0 0.0 4.415570206733833 0.0 5 0.0 0.0 0.0 5.3253227540409664 0.0 6 0.0 0.0 0.0 8.227175715830567 0.0 7 0.0 0.0 0.0 8.615495365217088 0.0 8 0.0 0.0 0.0 9.323556367395737 0.0 9 0.0 0.0 0.0 9.800512474114665 0.0 10 0.0 0.0 0.0 11.195466379985602 0.0 11 0.0 0.0 0.0 12.422106154446253 0.0 12 0.0 0.0 0.0 12.984765311591238 0.0 13 0.0 0.0 0.0 13.274141938839259 0.0 14 0.0 0.0 0.0 13.436509975169107 0.0 15 0.0 0.0 0.0 13.688307281508754 0.0 16 0.0 0.0 0.0 14.264285691633923 0.0 17 0.0 0.0 0.0 15.081279155686211 0.0 18 0.0 0.0 0.0 15.969229354365067 0.0 19 7.928126773918366E-5 0.0 0.0 16.504457192872298 0.0 20 7.928126773918366E-5 0.0 0.0 17.07028760072685 0.0 21 7.928126773918366E-5 0.0 0.0 17.895447035356273 0.0 22 7.928126773918366E-5 0.0 0.0 18.57092343649412 0.0 23 7.928126773918366E-5 0.0 0.0 19.317039447187575 0.0 24 3.1712507095673465E-4 0.0 0.0 19.863683788249247 0.0 25 6.342501419134693E-4 0.0 0.0 20.343652583142266 0.0 26 6.342501419134693E-4 0.0 0.0 20.77724183640786 0.0 27 6.342501419134693E-4 0.0 0.0 21.167622798755602 0.0 28 6.342501419134693E-4 0.0 0.0 21.586227892418492 0.0 29 6.342501419134693E-4 0.0 0.0 22.024732584283917 0.0 30 6.342501419134693E-4 0.0 0.0 22.528010071892254 0.0 31 6.342501419134693E-4 0.0 0.0 22.98371879885708 0.0 32 6.342501419134693E-4 0.0 0.0 23.405098736890842 0.0 33 6.342501419134693E-4 0.0 0.0 23.833217582682433 0.0 34 6.342501419134693E-4 0.0 0.0 24.23105098419766 0.0 35 6.342501419134693E-4 0.0 0.0 24.72322909432251 0.0 36 6.342501419134693E-4 0.0 0.0 25.171326819584376 0.0 37 6.342501419134693E-4 0.0 0.0 25.594054539169704 0.0 38 6.342501419134693E-4 0.0 0.0 26.0082198818392 0.0 39 7.135314096526529E-4 0.0 0.0 26.417231942105648 0.0 40 7.135314096526529E-4 0.0 0.0 26.85097975790672 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGTC 55 1.8189894E-12 46.000004 28 TTTAGCG 155 0.0 46.000004 1 CGAAACG 45 3.110472E-10 46.000004 33 GACCGTA 35 1.0196709E-7 46.000004 17 TAGCGCA 35 1.0196709E-7 46.000004 16 ATTACCG 35 1.0196709E-7 46.000004 16 GCAGTAA 35 1.0196709E-7 46.000004 10 CGACCGG 45 3.110472E-10 46.000004 26 CACGACG 35 1.0196709E-7 46.000004 27 ACGGGTA 55 1.8189894E-12 46.000004 5 CCGTAAG 35 1.0196709E-7 46.000004 35 CGGATGT 35 1.0196709E-7 46.000004 18 CGTAGAC 35 1.0196709E-7 46.000004 18 TATTACG 35 1.0196709E-7 46.000004 1 GTATCTC 35 1.0196709E-7 46.000004 20 CGTACAC 45 3.110472E-10 46.000004 41 TCCCGAA 45 3.110472E-10 46.000004 32 CGTAAGT 35 1.0196709E-7 46.000004 32 TAAGGTT 45 3.110472E-10 46.000004 45 CGATGCG 35 1.0196709E-7 46.000004 1 >>END_MODULE