##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545637_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1434635 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.593465236802395 33.0 31.0 34.0 31.0 34.0 2 32.98970121320057 34.0 33.0 34.0 31.0 34.0 3 33.04741763584466 34.0 33.0 34.0 31.0 34.0 4 36.411165906310664 37.0 37.0 37.0 35.0 37.0 5 36.401309043763746 37.0 37.0 37.0 35.0 37.0 6 36.41096585542664 37.0 37.0 37.0 35.0 37.0 7 36.5223830451648 37.0 37.0 37.0 35.0 37.0 8 36.58652549254688 37.0 37.0 37.0 35.0 37.0 9 38.38333583106505 39.0 39.0 39.0 37.0 39.0 10 38.109074433566725 39.0 39.0 39.0 35.0 39.0 11 37.899919491717405 39.0 38.0 39.0 35.0 39.0 12 37.63132085861561 39.0 37.0 39.0 35.0 39.0 13 37.55691238538025 39.0 37.0 39.0 35.0 39.0 14 38.94939339971491 41.0 38.0 41.0 35.0 41.0 15 38.98546389848289 41.0 38.0 41.0 35.0 41.0 16 39.04657630686551 41.0 38.0 41.0 35.0 41.0 17 39.006462270891205 41.0 38.0 41.0 35.0 41.0 18 38.983713627508045 41.0 38.0 41.0 35.0 41.0 19 38.99318223799085 41.0 38.0 41.0 35.0 41.0 20 38.91933767125436 41.0 38.0 41.0 35.0 41.0 21 38.90090650235077 41.0 38.0 41.0 35.0 41.0 22 38.970465658512445 41.0 38.0 41.0 35.0 41.0 23 38.97423456140412 41.0 38.0 41.0 35.0 41.0 24 38.94682340804456 41.0 38.0 41.0 35.0 41.0 25 38.87707605070279 41.0 38.0 41.0 35.0 41.0 26 38.77624831403109 40.0 38.0 41.0 35.0 41.0 27 38.70178268340031 40.0 38.0 41.0 35.0 41.0 28 38.64856496600181 40.0 38.0 41.0 35.0 41.0 29 38.68049155360074 40.0 38.0 41.0 35.0 41.0 30 38.634974052633595 40.0 37.0 41.0 35.0 41.0 31 38.55410052034141 40.0 37.0 41.0 35.0 41.0 32 38.54967082219519 40.0 37.0 41.0 35.0 41.0 33 38.49249669776633 40.0 37.0 41.0 35.0 41.0 34 38.44144468802169 40.0 37.0 41.0 35.0 41.0 35 38.28241259972049 40.0 37.0 41.0 35.0 41.0 36 38.2268381853224 40.0 37.0 41.0 35.0 41.0 37 38.1830437707152 40.0 36.0 41.0 34.0 41.0 38 38.07661321520805 40.0 36.0 41.0 34.0 41.0 39 38.06760674317858 40.0 36.0 41.0 34.0 41.0 40 38.01700781034897 40.0 36.0 41.0 34.0 41.0 41 37.901155346133336 40.0 36.0 41.0 34.0 41.0 42 37.802915724208596 40.0 36.0 41.0 34.0 41.0 43 37.7097916891753 40.0 35.0 41.0 33.0 41.0 44 37.64605631397533 40.0 35.0 41.0 33.0 41.0 45 37.59766769944969 40.0 35.0 41.0 33.0 41.0 46 37.61585002457071 40.0 35.0 41.0 33.0 41.0 47 37.62047907655954 40.0 35.0 41.0 33.0 41.0 48 37.54440467435968 40.0 35.0 41.0 33.0 41.0 49 37.485043233993316 39.0 35.0 41.0 33.0 41.0 50 37.37930344652124 39.0 35.0 41.0 33.0 41.0 51 37.17467160636678 39.0 35.0 40.0 33.0 41.0 52 36.80657797976489 39.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 11.0 12 12.0 13 17.0 14 17.0 15 22.0 16 21.0 17 47.0 18 93.0 19 201.0 20 358.0 21 603.0 22 1093.0 23 1754.0 24 2466.0 25 3250.0 26 4177.0 27 5660.0 28 7397.0 29 9784.0 30 12201.0 31 15948.0 32 20982.0 33 28866.0 34 62236.0 35 146740.0 36 70666.0 37 95855.0 38 192258.0 39 750966.0 40 933.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.688161100210156 13.497928044415477 47.924733468791715 13.889177386582649 2 23.665671059189272 13.81124815719678 51.697330679929046 10.82575010368491 3 24.093375666981498 14.032140579311115 47.73451086861815 14.13997288508924 4 20.436557033670585 14.828022458674159 50.16920680173006 14.566213705925202 5 22.453934275965665 16.036831667985236 47.4926375001307 14.016596555918404 6 24.111986672568282 18.89741990122923 44.82896346457461 12.16162996162787 7 87.12878188528789 2.175396529430831 6.225485924991374 4.4703356602899 8 89.4662405420194 1.850226712717869 6.094511844476122 2.589020900786611 9 81.16175891428831 4.92640985337734 7.7074656619976505 6.204365570336705 10 39.57815054003283 32.33533268043789 12.334705343170912 15.751811436358377 11 28.69872824795157 23.2072269253155 31.179568322256184 16.91447650447675 12 27.79794163672293 25.371679904644733 28.569496770955677 18.260881687676655 13 20.436347921248263 29.347604094421232 33.24552935067108 16.97051863365943 14 16.203006339591603 37.13857531706671 28.411268371397604 18.247149971944083 15 15.260466948039047 26.84083407974851 37.73426690412544 20.164432068087006 16 19.364437644418267 25.836467115328986 35.2942037521739 19.504891488078847 17 19.13016202727523 23.866906913605202 29.133960902947443 27.86897015617213 18 18.678339786775034 25.96758060412579 32.90767338033716 22.44640622876202 19 21.79641511603997 27.39832779766282 30.125641713746003 20.679615372551208 20 24.378186786186035 24.514737197963246 27.67421678684822 23.4328592290025 21 22.065612507711023 28.126945181178485 30.1767348489337 19.63070746217679 22 25.857866286546756 22.781125512761086 26.971599047841437 24.389409152850725 23 22.86525841067589 27.15324803869974 24.711581691510386 25.269911859113993 24 21.93638103071513 23.806752240116825 32.460033388283435 21.796833340884618 25 24.501354002934544 26.845573961321172 27.349604603261458 21.303467432482826 26 20.38699738957993 29.621541367664943 27.278018450686066 22.713442792069063 27 20.35423644341592 27.88576885409878 27.19123679542183 24.568757907063468 28 18.796488305387783 26.964628633763986 32.83378699111621 21.40509606973202 29 18.896095522554518 25.130782394128122 31.064835306541383 24.908286776775974 30 19.80190083191892 28.28949523746458 29.020970490752003 22.887633439864498 31 20.795393950377623 27.583601403841396 30.1898392273993 21.431165418381678 32 22.654194272410752 28.154269204362087 25.009148668476648 24.182387854750512 33 23.743321472012045 26.395494324340333 26.54605526841322 23.315128935234398 34 22.22885960540486 24.815510565405138 29.304387527141053 23.651242302048953 35 20.44980082041774 24.84604097906436 29.821940772391585 24.882217428126317 36 24.534951398787843 26.73481408163052 27.333015017757127 21.397219501824505 37 23.842789280897232 28.112446719897395 26.564805682281555 21.479958316923817 38 19.3769146856169 25.871388889857 32.65750521909754 22.094191205428558 39 20.35096034879952 27.84478281932338 28.102060802921997 23.7021960289551 40 24.69750145507394 24.032663360366925 29.13152125802033 22.138313926538807 41 23.090263377095916 24.44642714000425 28.980890609806675 23.482418873093156 42 21.749364821017192 26.91499928553256 26.33973101172075 24.9959048817295 43 20.640581053717497 24.44377838265482 29.259079835637635 25.656560727990048 44 24.42433092737874 25.26698428520146 26.162682494153565 24.146002293266232 45 19.285253740498455 27.138749577418647 28.141722459022677 25.43427422306022 46 20.074513726487922 27.277739634122966 27.14244389687969 25.505302742509418 47 21.335461633098316 26.015955277823277 30.55794679482935 22.090636294249062 48 21.13032234679901 21.732914643794416 33.8428938371084 23.29386917229818 49 20.365319401799063 23.082456513329173 28.719500081902368 27.832724002969396 50 19.40897859037316 24.03294217693002 31.88344073579691 24.67463849689991 51 21.34926305297166 24.313710455969638 28.976568953078658 25.36045753798004 52 20.47440638211113 22.87912953469001 29.64726219561073 26.999201887588132 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 394.0 1 295.0 2 196.0 3 174.5 4 153.0 5 214.5 6 276.0 7 282.5 8 289.0 9 485.0 10 681.0 11 752.0 12 823.0 13 985.0 14 1252.5 15 1358.0 16 1662.5 17 1967.0 18 1609.5 19 1252.0 20 2245.5 21 3239.0 22 3965.5 23 4692.0 24 7160.5 25 9629.0 26 11846.5 27 14064.0 28 16961.0 29 19858.0 30 23105.5 31 26353.0 32 31420.5 33 36488.0 34 41299.5 35 46111.0 36 50663.0 37 55215.0 38 57349.5 39 70330.5 40 81177.0 41 91146.0 42 101115.0 43 105604.5 44 110094.0 45 113548.0 46 117002.0 47 127652.5 48 138303.0 49 152575.5 50 166848.0 51 158246.5 52 149645.0 53 122537.5 54 95430.0 55 75691.0 56 55952.0 57 51608.5 58 47265.0 59 39552.0 60 31839.0 61 26634.0 62 21429.0 63 18228.0 64 11572.0 65 8117.0 66 6528.5 67 4940.0 68 3993.5 69 3047.0 70 2297.0 71 1547.0 72 1273.5 73 1000.0 74 845.0 75 690.0 76 464.0 77 238.0 78 169.5 79 101.0 80 72.5 81 44.0 82 45.5 83 47.0 84 36.0 85 25.0 86 18.0 87 11.0 88 11.5 89 10.0 90 8.0 91 7.0 92 6.0 93 4.0 94 2.0 95 2.5 96 3.0 97 1.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1434635.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.293231501764673 #Duplication Level Percentage of deduplicated Percentage of total 1 64.92907898715443 10.579045151340711 2 13.012970526541087 4.240466826291489 3 6.18215511759592 3.021818535324286 4 3.5275662511265384 2.299018142696673 5 2.2931628496900314 1.868151659062303 6 1.5161586613371636 1.4821874437543217 7 1.077863157118756 1.2293311762311185 8 0.7814064630336195 1.0185309119345505 9 0.5816239983307017 0.8528881006605701 >10 3.4987084090667775 11.467133250769871 >50 0.9311967324386405 11.132953252763924 >100 1.652275078653837 46.40449236189222 >500 0.009414672812842374 1.0327696869947254 >1k 0.005563215753043221 2.4530720448182843 >5k 8.558793466220341E-4 0.9181414554649301 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGCTT 8051 0.5611880373753603 Illumina Single End Adapter 2 (95% over 22bp) TTCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 5117 0.35667608834302805 No Hit GTCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 4953 0.34524460925601286 No Hit TGCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 4014 0.27979242106877356 No Hit ATCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 3795 0.26452721423916187 No Hit GCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGCT 3688 0.25706887117629224 Illumina Single End Adapter 2 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 3194 0.2226350256336978 No Hit GGCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 2952 0.20576662356627295 No Hit CCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGCT 2244 0.1564160918979392 Illumina Single End Adapter 2 (95% over 21bp) CTCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 2109 0.14700603289338401 No Hit TCCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 2029 0.1414297016314254 No Hit AGCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 1911 0.13320461302003644 No Hit ACCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 1649 0.11494212813712198 No Hit TCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGCT 1448 0.10093159584145096 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5888605812628299 0.0 2 0.0 0.0 0.0 1.1617589142883034 0.0 3 0.0 0.0 0.0 3.7724578028557785 0.0 4 0.0 0.0 0.0 4.366755307099019 0.0 5 0.0 0.0 0.0 5.234432451459779 0.0 6 0.0 0.0 0.0 8.05856541907872 0.0 7 0.0 0.0 0.0 8.394957602456374 0.0 8 6.970414077448271E-5 0.0 0.0 9.079661377284118 0.0 9 6.970414077448271E-5 0.0 0.0 9.548630836414837 0.0 10 6.970414077448271E-5 0.0 0.0 11.053822052299017 0.0 11 6.970414077448271E-5 0.0 0.0 12.458290784764069 0.0 12 6.970414077448271E-5 0.0 0.0 13.035162253813688 0.0 13 6.970414077448271E-5 0.0 0.0 13.292161420849206 0.0 14 6.970414077448271E-5 0.0 0.0 13.435194317718445 0.0 15 6.970414077448271E-5 0.0 0.0 13.66960934314303 0.0 16 6.970414077448271E-5 0.0 0.0 14.266137379891052 0.0 17 6.970414077448271E-5 0.0 0.0 15.140575825906938 0.0 18 6.970414077448271E-5 0.0 0.0 16.09517403381348 0.0 19 6.970414077448271E-5 0.0 0.0 16.71686526538109 0.0 20 6.970414077448271E-5 0.0 0.0 17.324476260512256 0.0 21 6.970414077448271E-5 0.0 0.0 18.242688906934518 0.0 22 6.970414077448271E-5 0.0 0.0 19.056345342195055 0.0 23 6.970414077448271E-5 0.0 0.0 19.89600142196447 0.0 24 6.970414077448271E-5 0.0 0.0 20.55122034524461 0.0 25 6.970414077448271E-5 0.0 0.0 21.099791933139787 0.0 26 6.970414077448271E-5 0.0 0.0 21.62807961606959 0.0 27 6.970414077448271E-5 0.0 0.0 22.110641382651337 0.0 28 6.970414077448271E-5 0.0 0.0 22.59633983556793 0.0 29 6.970414077448271E-5 0.0 0.0 23.112917222847624 0.0 30 6.970414077448271E-5 0.0 0.0 23.696968218397014 0.0 31 6.970414077448271E-5 0.0 0.0 24.229368445632513 0.0 32 6.970414077448271E-5 0.0 0.0 24.742112105169607 0.0 33 6.970414077448271E-5 0.0 0.0 25.239660262017864 0.0 34 6.970414077448271E-5 0.0 0.0 25.718458004997785 0.0 35 6.970414077448271E-5 0.0 0.0 26.31219787611483 0.0 36 6.970414077448271E-5 0.0 0.0 26.838742955525273 0.0 37 6.970414077448271E-5 0.0 0.0 27.365218330794942 0.0 38 6.970414077448271E-5 0.0 0.0 27.875173824701058 0.0 39 2.7881656309793084E-4 0.0 0.0 28.36163902316617 0.0 40 2.7881656309793084E-4 0.0 0.0 28.860790375252243 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTC 35 1.0198164E-7 46.000004 18 AGCGTAA 35 1.0198164E-7 46.000004 14 CTACTCG 35 1.0198164E-7 46.000004 18 GAATGCG 35 1.0198164E-7 46.000004 42 CGCGATA 35 1.0198164E-7 46.000004 6 TCGGCAC 35 1.0198164E-7 46.000004 27 GTAGCGT 35 1.0198164E-7 46.000004 12 TACGCAC 35 1.0198164E-7 46.000004 34 CGTAGCG 70 0.0 46.000004 1 GTCGTTC 55 1.8189894E-12 46.000004 15 ACGTCCA 35 1.0198164E-7 46.000004 33 GGCGATT 35 1.0198164E-7 46.000004 8 GCGCTTA 35 1.0198164E-7 46.000004 30 GATTCGC 35 1.0198164E-7 46.000004 16 CGTCCGC 35 1.0198164E-7 46.000004 27 CCGCCGT 35 1.0198164E-7 46.000004 38 TATCGGA 35 1.0198164E-7 46.000004 12 TCGAATC 35 1.0198164E-7 46.000004 35 GCGTAAA 35 1.0198164E-7 46.000004 15 TGGTCGA 35 1.0198164E-7 46.000004 34 >>END_MODULE