##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545634_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1328358 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.945886575757438 31.0 31.0 34.0 31.0 34.0 2 32.647826113141186 34.0 31.0 34.0 31.0 34.0 3 32.55862952607656 34.0 31.0 34.0 31.0 34.0 4 35.99190805490689 37.0 35.0 37.0 35.0 37.0 5 35.73254499163629 37.0 35.0 37.0 35.0 37.0 6 35.73484482345874 37.0 35.0 37.0 33.0 37.0 7 35.70595351554325 37.0 35.0 37.0 33.0 37.0 8 35.670713768426886 37.0 35.0 37.0 33.0 37.0 9 37.94150372113542 39.0 38.0 39.0 35.0 39.0 10 37.9529878240655 39.0 39.0 39.0 35.0 39.0 11 37.72264028221308 39.0 38.0 39.0 35.0 39.0 12 37.19465610927175 39.0 37.0 39.0 33.0 39.0 13 36.86696658581497 39.0 37.0 39.0 32.0 39.0 14 37.320030443600295 39.0 35.0 41.0 33.0 41.0 15 37.0549136603235 39.0 35.0 41.0 31.0 41.0 16 37.165218261944446 39.0 35.0 41.0 32.0 41.0 17 37.35573617955401 39.0 35.0 41.0 32.0 41.0 18 37.47028286049393 39.0 35.0 41.0 33.0 41.0 19 37.46367921900572 39.0 35.0 41.0 33.0 41.0 20 37.42368548237749 39.0 35.0 41.0 33.0 41.0 21 37.419934987405505 39.0 35.0 41.0 33.0 41.0 22 37.307858273146245 39.0 35.0 41.0 32.0 41.0 23 37.249555466222205 39.0 35.0 41.0 32.0 41.0 24 37.21504744955803 39.0 35.0 41.0 32.0 41.0 25 37.16972457726005 39.0 35.0 41.0 32.0 41.0 26 37.09483889132297 39.0 35.0 41.0 32.0 41.0 27 37.041178658162934 39.0 35.0 41.0 32.0 41.0 28 36.96546488220796 39.0 35.0 41.0 32.0 41.0 29 36.90988649144282 39.0 35.0 41.0 32.0 41.0 30 36.851096617026435 38.0 35.0 41.0 31.0 41.0 31 36.8263081187451 38.0 35.0 41.0 31.0 41.0 32 36.7588504002686 38.0 35.0 41.0 31.0 41.0 33 36.63753972950063 38.0 35.0 41.0 31.0 41.0 34 36.53421743234881 38.0 35.0 41.0 31.0 41.0 35 36.452783812797456 38.0 35.0 41.0 31.0 41.0 36 36.39945029878994 38.0 35.0 41.0 30.0 41.0 37 36.27398111051388 38.0 35.0 41.0 30.0 41.0 38 36.167800397182084 38.0 35.0 40.0 30.0 41.0 39 36.092969666309834 38.0 35.0 40.0 30.0 41.0 40 36.01162412542402 38.0 35.0 40.0 30.0 41.0 41 36.02898239781746 38.0 35.0 40.0 30.0 41.0 42 35.91998391999747 38.0 35.0 40.0 30.0 41.0 43 35.82827746736949 38.0 35.0 40.0 30.0 41.0 44 35.76127670402106 38.0 35.0 40.0 29.0 41.0 45 35.73633011582721 38.0 35.0 40.0 29.0 41.0 46 35.66220250866107 38.0 34.0 40.0 29.0 41.0 47 35.55244971611569 37.0 34.0 40.0 28.0 41.0 48 35.536563185526795 37.0 34.0 40.0 29.0 41.0 49 35.51919587942407 37.0 34.0 40.0 29.0 41.0 50 35.41984841435818 37.0 34.0 40.0 28.0 41.0 51 35.34002957034173 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 4.0 12 4.0 13 2.0 14 8.0 15 11.0 16 44.0 17 113.0 18 249.0 19 526.0 20 927.0 21 1521.0 22 2680.0 23 3968.0 24 6310.0 25 9536.0 26 13099.0 27 15696.0 28 18408.0 29 22082.0 30 26936.0 31 33534.0 32 42064.0 33 54496.0 34 87717.0 35 198217.0 36 89317.0 37 117377.0 38 176939.0 39 406326.0 40 241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 1.4006013439148182 92.90161236654576 2.4181734140946944 3.2796128754447222 2 3.30927355426775 2.0379295340563313 92.32782126505053 2.324975646625383 3 25.058681469904947 14.369017990632043 46.81531635297111 13.756984186491895 4 25.761353490549986 15.072066415830673 46.74545566782449 12.421124425794854 5 22.500636123695568 14.637770841896536 49.18124481502728 13.680348219380619 6 20.76480888435196 13.837007794585496 51.340527177161576 14.057656143900966 7 21.65651127181076 16.923901538591256 47.7475951513071 13.671992038290881 8 22.611524905183693 19.059620975670715 45.55804986306402 12.770804256081568 9 82.24379271250672 2.9655409159277846 10.180237556441863 4.610428815123633 10 84.74424816201656 2.723964473432614 9.380076756416567 3.151710608134253 11 77.64887176499107 6.32690886041263 9.867897057871447 6.156322316724859 12 42.55095388441971 28.76566407549772 14.634307920003492 14.049074120079075 13 34.48061441268092 23.1454171239982 29.011230406260964 13.36273805705992 14 31.355026280565934 26.883867150271236 24.568753302949958 17.192353266212873 15 18.903864771394456 35.04484483851492 31.735872407890042 14.315417982200582 16 14.448891036904207 40.5467501983652 28.013984181975037 16.990374582755553 17 12.979934626057133 26.56294462787893 42.85629325829332 17.600827487770616 18 16.213475584142227 23.364108169634992 42.85433595461464 17.568080291608133 19 16.491412706514357 22.79641482190795 29.08861918247942 31.623553289098272 20 18.713178224544887 23.989767818615164 35.672010105709454 21.625043851130492 21 24.087482440727577 25.74516809474554 29.767351873516024 20.39999759101086 22 23.700689121456715 25.11868035574747 27.97845159211598 23.202178930679832 23 20.60318076903967 28.922925897988343 31.078218371854575 19.39567496111741 24 27.345866099349724 21.622258457433915 26.338682794848978 24.693192648367383 25 21.477944951586846 28.93451915823897 24.21019032519848 25.377345564975705 26 20.417914447761824 23.467845264604872 36.01423712583505 20.10000316179825 27 21.57844496739584 25.976205209740144 31.059172301442832 21.386177521421182 28 17.90548933344776 33.568887302971035 26.112764781783227 22.412858581797977 29 18.301090519272666 33.22214342820234 26.2460119937547 22.2307540587703 30 17.23285439617934 27.470606568410023 33.57250078668552 21.724038248725115 31 16.649050933558573 27.039021107261746 31.411110559051096 24.90081740012858 32 19.18744796207047 33.641006415439215 26.358255831635745 20.813289790854576 33 22.76404403029906 28.17922578100181 24.659316238544125 24.397413950155002 34 25.173259016018275 29.255065276077687 25.422363549585274 20.149312158318764 35 24.372420687796513 29.665120396760514 23.94166331666614 22.020795598776836 36 18.970563658290914 28.41395166062161 25.846420919661718 26.76906376142576 37 20.02351775650841 27.218264955682127 30.848159908699312 21.91005737911015 38 24.203716166876703 29.498297898608662 25.227912957199788 21.07007297731485 39 22.158107979927095 31.71140611190658 27.251388556398197 18.879097351768124 40 19.676246915364683 29.10375064553381 28.908321401308985 22.31168103779252 41 20.06672899926074 29.73490580099642 25.92132542582647 24.27703977391637 42 24.29337573154225 25.763536636960822 25.723863597012254 24.21922403448468 43 19.050662547295232 26.494965965500267 28.43043818006893 26.02393330713558 44 19.014904114704017 28.816478690232607 25.104151139978832 27.064466055084544 45 19.746333443243465 25.449464677443885 27.136509886642006 27.66769199267065 46 21.708455100206418 27.137187414838472 27.94442462047129 23.20993286448382 47 17.315512836148088 31.324838635367875 26.308720992383076 25.050927536100957 48 19.28817382061161 28.65507641765247 26.52741203801987 25.529337723716043 49 20.235433520180553 27.005822225634958 29.240912464862635 23.517831789321857 50 20.01132224897204 25.952567003774586 32.35603655038777 21.680074196865604 51 19.618355895022276 24.294655507024462 28.59756180186365 27.48942679608961 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1049.0 1 1049.0 2 1049.0 3 3541.0 4 6033.0 5 4062.0 6 2091.0 7 2364.0 8 2637.0 9 2914.0 10 3191.0 11 3480.0 12 3769.0 13 3704.0 14 3639.0 15 3522.5 16 3406.0 17 3337.0 18 3268.0 19 3761.0 20 4254.0 21 5455.5 22 6657.0 23 6346.5 24 6036.0 25 6591.0 26 12167.0 27 17188.0 28 22504.5 29 27821.0 30 29997.5 31 32174.0 32 33483.5 33 34793.0 34 39320.5 35 43848.0 36 52544.0 37 61240.0 38 72427.0 39 83614.0 40 98183.0 41 112752.0 42 127322.5 43 141893.0 44 152885.0 45 163877.0 46 166980.0 47 170083.0 48 150894.0 49 131705.0 50 107647.0 51 83589.0 52 67122.5 53 50656.0 54 42979.0 55 35302.0 56 31751.5 57 28201.0 58 24743.0 59 21285.0 60 17970.5 61 14656.0 62 11248.5 63 7841.0 64 6115.0 65 4389.0 66 4025.5 67 3662.0 68 2593.5 69 1525.0 70 1183.0 71 841.0 72 672.0 73 503.0 74 455.0 75 220.5 76 34.0 77 129.5 78 225.0 79 121.5 80 18.0 81 10.5 82 3.0 83 3.0 84 3.0 85 2.5 86 2.0 87 2.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1328358.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.680009017518916 #Duplication Level Percentage of deduplicated Percentage of total 1 67.6201247556643 11.279042906902347 2 12.19029612064019 4.066684984370084 3 5.683619315729832 2.8440846431555484 4 3.3214248222074714 2.2160558394172716 5 2.117944255350986 1.7663664638928416 6 1.4603070064015042 1.4614760421073885 7 1.0044848664390436 1.1728371641115172 8 0.7607516414937455 1.0151475392166394 9 0.5451016450569444 0.8183070319512804 >10 3.387311753725091 10.906583982573647 >50 0.5995589872924288 7.260697831621492 >100 1.2733275394454653 47.5439170706571 >500 0.025792348880025413 2.7543675119531645 >1k 0.009049946975447514 3.6643133844247986 >5k 4.524973487723757E-4 0.38493065275425803 >10k+ 4.524973487723757E-4 0.8451869508906239 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGC 11198 0.842995638224033 No Hit ATCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTG 5100 0.3839326446635621 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4246 0.31964274691009503 No Hit ATGCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCT 3824 0.28787420258695323 No Hit ATTGCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC 3764 0.2833573479438525 No Hit CTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGCT 3492 0.26288094022846253 No Hit ATGTCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC 3426 0.2579124001210517 No Hit ATATCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC 2933 0.22079891113690736 No Hit AACTGCTTTTGGAATAATAGAAAGTTTTGTGAAATGTTGACCTAGTGTATA 2864 0.21560452829734153 No Hit CCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGC 2802 0.21093711183280411 No Hit ATGCCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC 2724 0.20506520079677315 No Hit ATTTCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC 2587 0.19475171602835983 No Hit ATGGCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC 2148 0.16170339622300614 No Hit ATACCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC 2063 0.1553045188119468 No Hit ATAGCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC 1840 0.13851687572175572 No Hit CGCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTG 1777 0.13377417834649996 No Hit ATCCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCT 1695 0.12760114366759562 No Hit ATTCCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC 1490 0.1121685569703348 No Hit ATCTCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTC 1471 0.11073821966668623 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2873472362119248 0.0 2 0.0 0.0 0.0 1.4578148360607608 0.0 3 0.0 0.0 0.0 2.059760998164651 0.0 4 0.0 0.0 0.0 2.688130759930681 0.0 5 7.52809107183455E-5 0.0 0.0 5.113681703275773 0.0 6 7.52809107183455E-5 0.0 0.0 5.60842784851674 0.0 7 1.50561821436691E-4 0.0 0.0 6.3707223504507065 0.0 8 1.50561821436691E-4 0.0 0.0 8.75660025384723 0.0 9 1.50561821436691E-4 0.0 0.0 9.071951988846381 0.0 10 1.50561821436691E-4 0.0 0.0 9.689330737647532 0.0 11 1.50561821436691E-4 0.0 0.0 10.1258094579925 0.0 12 1.50561821436691E-4 0.0 0.0 11.364029877487846 0.0 13 1.50561821436691E-4 0.0 0.0 12.512440170496207 0.0 14 1.50561821436691E-4 0.0 0.0 13.00372339384413 0.0 15 1.50561821436691E-4 0.0 0.0 13.252978489232571 0.0 16 1.50561821436691E-4 0.0 0.0 13.385096487543267 0.0 17 1.50561821436691E-4 0.0 0.0 13.607777421448134 0.0 18 1.50561821436691E-4 0.0 0.0 14.142271887548386 0.0 19 2.2584273215503652E-4 0.0 0.0 14.869786608730477 0.0 20 2.2584273215503652E-4 0.0 0.0 15.71278224695451 0.0 21 4.5168546431007304E-4 0.0 0.0 16.218594686071075 0.0 22 4.5168546431007304E-4 0.0 0.0 16.73931274550987 0.0 23 4.5168546431007304E-4 0.0 0.0 17.548657816642802 0.0 24 5.269663750284185E-4 0.0 0.0 18.200590503463676 0.0 25 6.02247285746764E-4 0.0 0.0 18.957314218004484 0.0 26 7.52809107183455E-4 0.0 0.0 19.50483228165901 0.0 27 7.52809107183455E-4 0.0 0.0 19.994760448614002 0.0 28 7.52809107183455E-4 0.0 0.0 20.475052658997047 0.0 29 7.52809107183455E-4 0.0 0.0 20.907692052895378 0.0 30 7.52809107183455E-4 0.0 0.0 21.369164035598835 0.0 31 8.280900179018006E-4 0.0 0.0 21.82446298362339 0.0 32 9.033709286201461E-4 0.0 0.0 22.37326082276013 0.0 33 9.033709286201461E-4 0.0 0.0 22.919574391843163 0.0 34 9.033709286201461E-4 0.0 0.0 23.385939633743313 0.0 35 9.033709286201461E-4 0.0 0.0 23.846282402785995 0.0 36 9.033709286201461E-4 0.0 0.0 24.319498207561516 0.0 37 9.033709286201461E-4 0.0 0.0 24.8889982971458 0.0 38 9.033709286201461E-4 0.0 0.0 25.37169949667183 0.0 39 9.033709286201461E-4 0.0 0.0 25.89414901705715 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCGTA 125 0.0 45.000004 2 TCGAGTA 125 0.0 45.000004 2 CGGACAG 35 1.21212E-7 45.0 8 TGATCCG 45 3.8562575E-10 45.0 3 CCTTCGC 35 1.21212E-7 45.0 12 AGCCGGT 20 7.033684E-4 45.0 14 GGTACGA 20 7.033684E-4 45.0 44 TCCATCG 40 6.8157533E-9 45.0 17 ACCGGTA 45 3.8562575E-10 45.0 21 CGAACTA 40 6.8157533E-9 45.0 24 ACCGGAC 35 1.21212E-7 45.0 40 CGTATTA 75 0.0 45.0 32 CACGGTC 20 7.033684E-4 45.0 41 ACGTTCC 40 6.8157533E-9 45.0 22 ACGTTCA 35 1.21212E-7 45.0 34 CGTGCCG 70 0.0 45.0 37 GCGAAAG 20 7.033684E-4 45.0 13 TCCGAAT 40 6.8157533E-9 45.0 31 CGGCCCC 20 7.033684E-4 45.0 30 CGTTGTA 20 7.033684E-4 45.0 18 >>END_MODULE