SRR1545632_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545632_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2666852
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC	9440	0.35397539870978967	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6512	0.24418302927946509	No Hit
ATGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCT	4950	0.18561209995905284	No Hit
ATCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG	4922	0.18456217292898142	No Hit
ATGCCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC	3916	0.1468397946342729	No Hit
CTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT	3832	0.1436900135440587	No Hit
ATTGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC	3502	0.1313158735467885	No Hit
ATGTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC	3450	0.12936600906237017	No Hit
ATATCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC	3132	0.11744183779227343	No Hit
ATGGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC	2846	0.10671758312797261	No Hit
CCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC	2836	0.1063426091886614	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	2812	0.10544267173431447	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCAATA	30	2.1665837E-6	45.000004	17
ACAATCG	45	3.8562575E-10	45.0	35
CGTAATC	35	1.2127384E-7	45.0	32
CTCGACC	20	7.034964E-4	45.0	43
ACGTAAC	20	7.034964E-4	45.0	12
GCCCGTA	40	6.8212103E-9	45.0	40
AATCGAC	20	7.034964E-4	45.0	38
AAGTCGA	20	7.034964E-4	45.0	37
ATTCGAT	135	0.0	40.000004	1
CACTACG	45	1.9299478E-8	40.0	9
TGCGAAC	45	1.9299478E-8	40.0	14
CGACTAT	40	3.4605182E-7	39.375	25
CCGTTGA	40	3.4605182E-7	39.375	30
TAAGACG	65	9.094947E-12	38.076927	3
CGTTTTT	3500	0.0	37.99286	1
ATTTGTT	3965	0.0	37.90668	1
ATCGTAG	395	0.0	37.594936	1
GGTCGAA	30	1.1403259E-4	37.500004	21
CTATACG	60	1.5643309E-10	37.500004	3
ATTACGA	60	1.5643309E-10	37.500004	1