##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545632_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2666852 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.911982742199417 31.0 31.0 34.0 31.0 34.0 2 32.58882945135313 34.0 31.0 34.0 31.0 34.0 3 32.56254790292075 34.0 31.0 34.0 31.0 34.0 4 36.02572208731493 37.0 35.0 37.0 35.0 37.0 5 35.80332991857066 37.0 35.0 37.0 35.0 37.0 6 35.80570912821559 37.0 35.0 37.0 35.0 37.0 7 35.77922696872567 37.0 35.0 37.0 35.0 37.0 8 35.749153683818975 37.0 35.0 37.0 33.0 37.0 9 37.93615993688439 39.0 38.0 39.0 35.0 39.0 10 37.87930863804966 39.0 38.0 39.0 35.0 39.0 11 37.70909784269993 39.0 38.0 39.0 35.0 39.0 12 37.22750343851102 39.0 37.0 39.0 33.0 39.0 13 36.99955978059525 39.0 37.0 39.0 33.0 39.0 14 37.721073760373656 40.0 36.0 41.0 33.0 41.0 15 37.593897599116865 40.0 36.0 41.0 33.0 41.0 16 37.42139646294582 40.0 36.0 41.0 32.0 41.0 17 37.58073526389916 40.0 36.0 41.0 32.0 41.0 18 37.672191782671106 40.0 36.0 41.0 33.0 41.0 19 37.67023329378608 40.0 35.0 41.0 33.0 41.0 20 37.63090940179657 40.0 35.0 41.0 33.0 41.0 21 37.61862863031019 40.0 35.0 41.0 33.0 41.0 22 37.5429866374287 40.0 35.0 41.0 32.0 41.0 23 37.48033449175282 40.0 35.0 41.0 32.0 41.0 24 37.50358850059921 40.0 35.0 41.0 32.0 41.0 25 37.45182372325123 39.0 35.0 41.0 32.0 41.0 26 37.377761120602116 39.0 35.0 41.0 32.0 41.0 27 37.282622357746135 39.0 35.0 41.0 32.0 41.0 28 37.20499525282993 39.0 35.0 41.0 32.0 41.0 29 37.16693914772923 39.0 35.0 41.0 32.0 41.0 30 37.092578065824426 39.0 35.0 41.0 32.0 41.0 31 36.98032511740434 39.0 35.0 41.0 31.0 41.0 32 36.86686062818634 39.0 35.0 41.0 31.0 41.0 33 36.73448882802645 39.0 35.0 41.0 31.0 41.0 34 36.703980198376215 39.0 35.0 41.0 31.0 41.0 35 36.61708936228932 39.0 35.0 41.0 30.0 41.0 36 36.46982884689514 39.0 35.0 41.0 30.0 41.0 37 36.37002390833837 39.0 35.0 41.0 30.0 41.0 38 36.30707928298983 38.0 35.0 41.0 30.0 41.0 39 36.246299007219 38.0 35.0 41.0 30.0 41.0 40 36.16331239978822 38.0 35.0 41.0 30.0 41.0 41 36.07498691340952 38.0 35.0 40.0 30.0 41.0 42 35.92940515634164 38.0 35.0 40.0 29.0 41.0 43 35.79100302528974 38.0 35.0 40.0 29.0 41.0 44 35.75580384663266 38.0 35.0 40.0 29.0 41.0 45 35.73353226950727 38.0 35.0 40.0 29.0 41.0 46 35.680758062314666 37.0 34.0 40.0 29.0 41.0 47 35.61309214009626 37.0 34.0 40.0 29.0 41.0 48 35.559431869485074 37.0 34.0 40.0 29.0 41.0 49 35.51129908971326 37.0 34.0 40.0 29.0 41.0 50 35.40576642423352 37.0 34.0 40.0 29.0 41.0 51 35.21814408898582 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 20.0 11 23.0 12 29.0 13 46.0 14 52.0 15 83.0 16 197.0 17 412.0 18 797.0 19 1367.0 20 2381.0 21 3853.0 22 5910.0 23 8920.0 24 12652.0 25 17790.0 26 24213.0 27 29657.0 28 36004.0 29 43134.0 30 52315.0 31 65632.0 32 82235.0 33 108735.0 34 181255.0 35 280399.0 36 196716.0 37 272554.0 38 416398.0 39 822667.0 40 394.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.012897603616549 91.54711247568294 3.3011580695141687 3.1388318511863424 2 3.045650827267505 2.9566695114689527 91.27701874719708 2.7206609140664724 3 28.564764748849953 15.556093851477323 42.42117672821739 13.457964671455333 4 27.236644553203554 15.788202719910965 43.38950942909468 13.585643297790803 5 24.962015139947773 14.25170950618932 45.86669976436637 14.919575589496532 6 23.33361581370095 14.36870137525442 47.15428527717324 15.143397533871397 7 22.586142763077966 17.283261313338723 44.69239387862544 15.438202044957874 8 26.28132344802036 19.094947901120875 42.93567847034631 11.688050180512455 9 82.40986001472898 3.9159278430149103 9.141077195134937 4.533134947121175 10 83.33435826210078 3.9787359778495395 8.838585718292578 3.848320041757098 11 76.78528842245463 6.402942495496563 10.236338574469075 6.575430507579723 12 42.841934985518506 22.29486300702101 16.909599782815093 17.953602224645387 13 34.8855129568495 24.13785991873565 23.28385677195435 17.692770352460503 14 30.276295797442078 23.173014475493954 26.82312329293114 19.72756643413283 15 24.558618176036763 24.52232069871144 31.64198838180746 19.277072743444332 16 19.50606932818169 29.229706035430535 31.554094490432917 19.710130145954857 17 19.304595830589776 23.28389426934828 37.740602028159046 19.670907871902905 18 24.834074031854787 21.630746663106915 33.07495129088529 20.460228014153017 19 24.432139466307092 22.024469299383693 28.34394259598958 25.199448638319637 20 25.29349210229889 22.19823222286051 30.64804496087522 21.86023071396538 21 27.048820107002562 24.75236721047887 26.858783314559638 21.340029367958927 22 26.477172336522614 24.52123327428744 26.711906022531434 22.289688366658517 23 26.447211918771647 23.583460949464012 29.401856570968317 20.567470560796025 24 28.47004633177994 20.727284453730466 27.94013316074533 22.862536053744265 25 27.24020680562701 23.34640242503146 26.407764660356104 23.005626108985425 26 26.79702510675508 22.451189642319857 28.669494970099578 22.082290280825482 27 28.489807458381645 22.058966901800325 26.201266511977416 23.249959127840615 28 22.812852006785526 25.366237046525264 26.630274195943382 25.19063675074582 29 21.969123145941357 23.80904527135364 29.760706630889157 24.461124951815847 30 22.761143100554513 24.09308803038189 28.893504401444098 24.2522644676195 31 23.003226275773834 24.632150565535696 28.195415418628407 24.169207740062067 32 24.0945504287452 24.50233458774615 28.649396366952494 22.75371861655615 33 24.212592224840375 24.316197524272063 28.16575498002889 23.305455270858673 34 28.18375372911583 23.382662404962858 26.27779869299084 22.155785172930482 35 26.31994576376942 24.67583502946545 24.750454843388383 24.253764363376746 36 23.145453890954578 24.431652000185988 28.61099903556703 23.811895073292405 37 23.63854462114883 25.5589361539373 29.13450015223942 21.66801907267445 38 25.391772771792358 27.531149085138583 25.149502109603382 21.927576033465673 39 24.187318981330797 28.344467559504615 25.745485688744633 21.722727770419954 40 25.280218024847272 24.72686898260571 26.885106485099286 23.10780650744773 41 23.77124789827107 25.81560581539583 24.362319318807344 26.050826967525758 42 25.55649882333178 23.072071491031373 27.950557436258176 23.420872249378668 43 22.451302134501653 24.275512851856796 27.598381912457082 25.67480310118447 44 21.22551232689328 25.650354800341375 27.930271346141446 25.193861526623902 45 21.620472377169786 23.082945735271398 28.876930553326545 26.41965133423227 46 24.67947227667677 22.937905815545818 27.486827165511997 24.895794742265412 47 21.030713365421104 23.80162078735528 27.855239060885268 27.31242678633835 48 21.48053210301884 24.866209298453757 27.077468115965942 26.575790482561462 49 22.803027689575575 24.59585308821037 29.984716062233673 22.61640315998038 50 22.028556515322183 23.557212773712227 30.60829772330823 23.805932987657357 51 22.476800362374817 23.52526499408291 28.197627764870344 25.80030687867193 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 938.0 1 1578.0 2 2218.0 3 6405.5 4 10593.0 5 7182.0 6 3771.0 7 3852.5 8 3934.0 9 4111.0 10 4288.0 11 4639.0 12 4990.0 13 5105.0 14 5220.0 15 5102.0 16 4984.0 17 4903.0 18 4822.0 19 5759.5 20 6697.0 21 7527.0 22 8357.0 23 10794.5 24 13232.0 25 15422.5 26 21115.0 27 24617.0 28 30397.0 29 36177.0 30 42984.5 31 49792.0 32 54340.5 33 58889.0 34 64742.0 35 70595.0 36 79930.5 37 89266.0 38 102839.5 39 116413.0 40 133643.0 41 150873.0 42 177742.0 43 204611.0 44 224417.5 45 244224.0 46 239727.0 47 235230.0 48 218053.0 49 200876.0 50 184904.0 51 168932.0 52 167998.0 53 167064.0 54 169057.5 55 171051.0 56 165100.5 57 159150.0 58 145329.0 59 131508.0 60 115716.0 61 99924.0 62 84666.5 63 69409.0 64 57870.0 65 46331.0 66 38219.5 67 30108.0 68 24759.5 69 19411.0 70 16594.5 71 13778.0 72 10771.0 73 7764.0 74 6198.0 75 3648.5 76 2665.0 77 1867.0 78 1069.0 79 713.5 80 358.0 81 208.0 82 58.0 83 176.0 84 294.0 85 171.0 86 48.0 87 41.5 88 35.0 89 37.5 90 40.0 91 21.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2666852.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.891072945321799 #Duplication Level Percentage of deduplicated Percentage of total 1 71.15369267630174 11.307085206481204 2 11.253719795253119 3.576673643451584 3 4.674617182896816 2.22854047934604 4 2.5734752819485824 1.6358113371371004 5 1.5839974456368522 1.258570947690931 6 1.0290516546997708 0.9811640945602896 7 0.7582456058713193 0.8434535363359599 8 0.5423475907368274 0.6894788100894766 9 0.4235135605414837 0.605707639550791 >10 3.0555664750678826 10.48945749632194 >50 1.1093808881795937 13.117234673746253 >100 1.8300427356950744 49.91590130867885 >500 0.006649519245919541 0.7203915585592486 >1k 0.0052246222646510675 2.0285236028957376 >5k 4.7496566042282433E-4 0.602005665154651 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 9440 0.35397539870978967 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6512 0.24418302927946509 No Hit ATGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCT 4950 0.18561209995905284 No Hit ATCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG 4922 0.18456217292898142 No Hit ATGCCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC 3916 0.1468397946342729 No Hit CTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 3832 0.1436900135440587 No Hit ATTGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC 3502 0.1313158735467885 No Hit ATGTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC 3450 0.12936600906237017 No Hit ATATCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC 3132 0.11744183779227343 No Hit ATGGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC 2846 0.10671758312797261 No Hit CCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 2836 0.1063426091886614 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2812 0.10544267173431447 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.749739393112179E-5 0.0 0.0 0.15655161966243347 0.0 2 3.749739393112179E-5 0.0 0.0 0.6656162396713429 0.0 3 3.749739393112179E-5 0.0 0.0 0.936309926460111 0.0 4 3.749739393112179E-5 0.0 0.0 1.280498505353878 0.0 5 3.749739393112179E-5 0.0 0.0 2.5163001171418586 0.0 6 3.749739393112179E-5 0.0 0.0 2.8001928865943815 0.0 7 3.749739393112179E-5 0.0 0.0 3.2675229071579523 0.0 8 3.749739393112179E-5 0.0 0.0 4.669625461030458 0.0 9 7.499478786224358E-5 0.0 0.0 4.85988723783697 0.0 10 7.499478786224358E-5 0.0 0.0 5.208987975335714 0.0 11 7.499478786224358E-5 0.0 0.0 5.469482370975217 0.0 12 7.499478786224358E-5 0.0 0.0 6.239491355350803 0.0 13 7.499478786224358E-5 0.0 0.0 6.918831641200937 0.0 14 1.4998957572448716E-4 0.0 0.0 7.190762741989432 0.0 15 1.4998957572448716E-4 0.0 0.0 7.348664267833386 0.0 16 1.4998957572448716E-4 0.0 0.0 7.464381225504828 0.0 17 1.4998957572448716E-4 0.0 0.0 7.627194909953758 0.0 18 1.4998957572448716E-4 0.0 0.0 7.944572852186773 0.0 19 1.4998957572448716E-4 0.0 0.0 8.339382912887555 0.0 20 1.4998957572448716E-4 0.0 0.0 8.749566905100096 0.0 21 1.4998957572448716E-4 0.0 0.0 9.056858048365639 0.0 22 1.4998957572448716E-4 0.0 0.0 9.409746022651426 0.0 23 1.8748696965560893E-4 0.0 0.0 9.907898901026378 0.0 24 1.8748696965560893E-4 0.0 0.0 10.366267044440411 0.0 25 2.2498436358673072E-4 0.0 0.0 10.819798024037329 0.0 26 2.624817575178525E-4 0.0 0.0 11.173960909716774 0.0 27 2.999791514489743E-4 0.0 0.0 11.496738476675871 0.0 28 3.374765453800961E-4 0.0 0.0 11.790155584186898 0.0 29 3.7497393931121785E-4 0.0 0.0 12.123844892779951 0.0 30 3.7497393931121785E-4 0.0 0.0 12.427048820107002 0.0 31 3.7497393931121785E-4 0.0 0.0 12.785448911300664 0.0 32 3.7497393931121785E-4 0.0 0.0 13.171259597457977 0.0 33 3.7497393931121785E-4 0.0 0.0 13.522310199441138 0.0 34 3.7497393931121785E-4 0.0 0.0 13.857911875124678 0.0 35 9.749322422091664E-4 0.0 0.0 14.218524312560277 0.0 36 0.001087424424002532 0.0 0.0 14.59271080659894 0.0 37 0.0011249218179336536 0.0 0.0 15.014481493536199 0.0 38 0.0011999166057958973 0.0 0.0 15.377156287638009 0.0 39 0.0011999166057958973 0.0 0.0 15.77230382488417 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATA 30 2.1665837E-6 45.000004 17 ACAATCG 45 3.8562575E-10 45.0 35 CGTAATC 35 1.2127384E-7 45.0 32 CTCGACC 20 7.034964E-4 45.0 43 ACGTAAC 20 7.034964E-4 45.0 12 GCCCGTA 40 6.8212103E-9 45.0 40 AATCGAC 20 7.034964E-4 45.0 38 AAGTCGA 20 7.034964E-4 45.0 37 ATTCGAT 135 0.0 40.000004 1 CACTACG 45 1.9299478E-8 40.0 9 TGCGAAC 45 1.9299478E-8 40.0 14 CGACTAT 40 3.4605182E-7 39.375 25 CCGTTGA 40 3.4605182E-7 39.375 30 TAAGACG 65 9.094947E-12 38.076927 3 CGTTTTT 3500 0.0 37.99286 1 ATTTGTT 3965 0.0 37.90668 1 ATCGTAG 395 0.0 37.594936 1 GGTCGAA 30 1.1403259E-4 37.500004 21 CTATACG 60 1.5643309E-10 37.500004 3 ATTACGA 60 1.5643309E-10 37.500004 1 >>END_MODULE