##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545631_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2154411 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.580776834132394 33.0 31.0 34.0 31.0 34.0 2 32.981465467823924 34.0 31.0 34.0 31.0 34.0 3 33.05795458712381 34.0 33.0 34.0 31.0 34.0 4 36.42904255501852 37.0 37.0 37.0 35.0 37.0 5 36.398673697822744 37.0 37.0 37.0 35.0 37.0 6 36.41130916988448 37.0 37.0 37.0 35.0 37.0 7 36.49244874817293 37.0 37.0 37.0 35.0 37.0 8 36.53200294651299 37.0 37.0 37.0 35.0 37.0 9 38.346837256215274 39.0 39.0 39.0 37.0 39.0 10 38.11356236112794 39.0 39.0 39.0 35.0 39.0 11 37.94520590546558 39.0 38.0 39.0 35.0 39.0 12 37.545350446131216 39.0 37.0 39.0 35.0 39.0 13 37.430519524826046 39.0 37.0 39.0 35.0 39.0 14 38.48636866410355 41.0 38.0 41.0 34.0 41.0 15 38.664136508772 41.0 38.0 41.0 34.0 41.0 16 38.79241379662469 41.0 38.0 41.0 35.0 41.0 17 38.77096895624837 41.0 38.0 41.0 35.0 41.0 18 38.75214292908827 40.0 38.0 41.0 35.0 41.0 19 38.73514013807022 40.0 38.0 41.0 35.0 41.0 20 38.61873477252019 40.0 38.0 41.0 34.0 41.0 21 38.594503091564235 40.0 37.0 41.0 35.0 41.0 22 38.74867608826728 40.0 38.0 41.0 35.0 41.0 23 38.77777360030189 40.0 38.0 41.0 35.0 41.0 24 38.73539867741113 40.0 38.0 41.0 35.0 41.0 25 38.66044408425319 40.0 37.0 41.0 35.0 41.0 26 38.56157669079855 40.0 37.0 41.0 35.0 41.0 27 38.507275074254636 40.0 37.0 41.0 35.0 41.0 28 38.454700611907384 40.0 37.0 41.0 35.0 41.0 29 38.381669514312726 40.0 36.0 41.0 35.0 41.0 30 38.32722354276876 40.0 36.0 41.0 34.0 41.0 31 38.23986973701861 40.0 36.0 41.0 34.0 41.0 32 38.216620691223724 40.0 36.0 41.0 34.0 41.0 33 38.1416507806542 40.0 36.0 41.0 34.0 41.0 34 37.98057195214841 40.0 35.0 41.0 34.0 41.0 35 37.928956452598875 40.0 35.0 41.0 34.0 41.0 36 37.86984702547471 40.0 35.0 41.0 34.0 41.0 37 37.79142884064368 40.0 35.0 41.0 34.0 41.0 38 37.703784004073505 40.0 35.0 41.0 34.0 41.0 39 37.589788577945434 40.0 35.0 41.0 33.0 41.0 40 37.454737745026364 40.0 35.0 41.0 33.0 41.0 41 37.28387851714459 39.0 35.0 41.0 33.0 41.0 42 37.27539127863718 39.0 35.0 41.0 33.0 41.0 43 37.21884867836267 39.0 35.0 41.0 33.0 41.0 44 37.12236708780265 39.0 35.0 41.0 33.0 41.0 45 37.06196217898999 39.0 35.0 41.0 33.0 41.0 46 37.05884253283148 39.0 35.0 41.0 33.0 41.0 47 37.020074628285876 39.0 35.0 41.0 33.0 41.0 48 36.92679762589404 39.0 35.0 41.0 33.0 41.0 49 36.845406934888466 38.0 35.0 41.0 33.0 41.0 50 36.75065017770518 38.0 35.0 41.0 33.0 41.0 51 36.62122779729587 38.0 35.0 40.0 32.0 41.0 52 36.30925436232919 37.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 5.0 11 6.0 12 12.0 13 20.0 14 32.0 15 64.0 16 117.0 17 191.0 18 326.0 19 654.0 20 983.0 21 1552.0 22 2249.0 23 3279.0 24 4555.0 25 6058.0 26 7872.0 27 9773.0 28 12526.0 29 16342.0 30 20343.0 31 27221.0 32 37022.0 33 53306.0 34 139979.0 35 208933.0 36 121692.0 37 183674.0 38 318565.0 39 975641.0 40 1416.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.312657148519943 13.348845693788233 46.03443818287226 12.304058974819569 2 25.784263077008056 13.010516563459804 49.135424949092815 12.069795410439326 3 25.98394642433593 13.891592644114795 44.89208419377733 15.232376737771947 4 23.691440491159767 13.924084123224398 47.36807415112529 15.016401234490539 5 23.010140590630108 16.53240723334591 44.71570187861091 15.741750297413073 6 25.498523726438453 18.55217040759632 43.97554598449413 11.973759881471084 7 86.0021602191968 2.6507476985589102 6.724204434529901 4.6228876477143865 8 87.33946308294935 2.6538111808749583 6.884433842938975 3.122291893236713 9 79.69407879926347 4.456484858274489 9.019866682819574 6.829569659642473 10 44.055428606705036 21.273192533829434 15.353802036844408 19.317576822621124 11 35.745686408025215 22.595595733590297 23.6008356808427 18.0578821775418 12 31.564265128612877 22.704859936196016 25.6409756541347 20.0898992810564 13 25.556033644462456 22.82633165166721 32.59856174146901 19.019072962401324 14 19.347979563787966 29.36788755720241 31.6398774421408 19.644255436868825 15 19.010810843427738 22.767522074478823 37.64318878802605 20.57847829406738 16 25.360202858229002 22.07916688134251 31.689171657589938 20.87145860283855 17 25.115217105742587 22.296627709383216 26.870453223642098 25.7177019612321 18 25.72833131654081 22.1983177768773 29.100621933326558 22.972728973255336 19 27.03806283944893 25.157966608971083 26.19244888742213 21.61152166415786 20 26.35272471222993 24.22230484341196 25.607973594639095 23.81699684971902 21 25.842747739405343 24.33351853476426 29.426557885194608 20.397175840635793 22 28.239783402516977 20.202598297167995 27.974885014976252 23.58273328533878 23 27.213795325033153 23.48307727726975 25.429316875934997 23.873810521762096 24 26.956880558073642 22.03335389579797 27.354529845976465 23.655235700151923 25 30.616303017390834 21.617880710783595 23.777542910800214 23.988273361025357 26 22.787481125931865 25.12083348998868 25.383178975599364 26.708506408480094 27 21.828843243002378 22.50044211619788 30.104005224629844 25.566709416169896 28 23.118058717672717 22.74092547800768 29.08233387222772 25.05868193209188 29 22.59109334291368 23.594476634216964 28.29130560510506 25.523124417764297 30 24.543506322609755 23.04820203758707 28.428280397751404 23.98001124205177 31 23.574610415561377 23.033720121183933 28.31210015173521 25.079569311519485 32 29.49311900097057 22.38565436214353 25.520571515834256 22.600655121051645 33 26.442261945376256 24.615869488226714 23.8255838834837 25.11628468291334 34 22.10061125755485 24.070755301565022 28.62963473543349 25.19899870544664 35 23.794902643924488 24.89766344490443 29.11292227898948 22.194511632181605 36 24.914141266452873 26.777713258983542 25.161401422476953 23.146744052086625 37 24.536451030003096 28.382281746611955 24.86493988380119 22.216327339583767 38 24.45652199139347 23.42570660844194 27.73268424641352 24.385087153751073 39 24.01886176778711 25.392880002933516 23.500297761197842 27.08796046808153 40 26.681306398825477 22.310088465014335 27.913429703060373 23.09517543309981 41 22.61202713874001 23.715855516890695 27.481942860484835 26.19017448388446 42 20.82880193240751 25.52358858175158 27.581088288167855 26.066521197673055 43 21.39610315766119 21.57294963681489 29.418481431815934 27.61246577370799 44 26.649279083703153 21.027417702564648 26.399187527356666 25.924115686375533 45 20.97677741155239 21.74018792143189 27.98245088796892 29.3005837790468 46 21.421585760562863 23.378222632543185 26.708413575682634 28.49177803121131 47 22.72291591530121 23.467527783695868 30.844671699132615 22.964884601870303 48 21.419868353809928 22.44307144737007 31.96896970912235 24.16809048969765 49 22.368433878215438 21.853072603138397 27.577467809067073 28.201025709579092 50 21.052343308681586 23.065840269103713 29.30573599930561 26.576080422909094 51 22.95936105042167 23.857611198606023 27.01452972529383 26.16849802567848 52 21.232160437353876 22.90236171278368 28.303095370381975 27.56238247948047 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 283.0 1 223.5 2 164.0 3 160.0 4 156.0 5 225.5 6 295.0 7 374.5 8 454.0 9 593.5 10 733.0 11 848.0 12 963.0 13 1116.0 14 1402.0 15 1535.0 16 1396.5 17 1258.0 18 1314.0 19 1370.0 20 2173.5 21 2977.0 22 3765.0 23 4553.0 24 6119.0 25 7685.0 26 8907.0 27 10129.0 28 12336.0 29 14543.0 30 20369.5 31 26196.0 32 28563.5 33 30931.0 34 35858.5 35 40786.0 36 44160.0 37 47534.0 38 52184.0 39 70617.5 40 84401.0 41 96044.0 42 107687.0 43 126171.0 44 144655.0 45 173246.0 46 201837.0 47 210399.5 48 218962.0 49 204722.0 50 190482.0 51 168812.0 52 147142.0 53 140417.5 54 133693.0 55 134534.0 56 135375.0 57 129200.0 58 123025.0 59 116601.5 60 110178.0 61 99952.5 62 89727.0 63 79114.5 64 60009.5 65 51517.0 66 43395.0 67 35273.0 68 29194.0 69 23115.0 70 19021.0 71 14927.0 72 12701.0 73 10475.0 74 7717.5 75 4960.0 76 4506.0 77 4052.0 78 3035.0 79 2018.0 80 1390.0 81 762.0 82 632.5 83 503.0 84 349.5 85 196.0 86 174.0 87 152.0 88 99.0 89 37.0 90 28.0 91 29.0 92 30.0 93 32.5 94 35.0 95 19.0 96 3.0 97 2.5 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2154411.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.945936654961596 #Duplication Level Percentage of deduplicated Percentage of total 1 67.33989176015977 11.41137540119638 2 12.686496605568756 4.299691357027069 3 5.4350712034285795 2.7630711698551984 4 2.987285275301791 2.0248938818225466 5 1.811301749901113 1.5347102358422675 6 1.1788480857241401 1.1986010991902412 7 0.8211817374778468 0.9740985593857627 8 0.620678752598219 0.8414386259687999 9 0.4607834236012186 0.7027566037202327 >10 3.6788001683061067 13.435743142820641 >50 1.383169162113351 17.263741273374002 >100 1.5855365632377871 39.76565288485245 >500 0.005751644105203913 0.6862140694029847 >1k 0.003834429403469275 1.5122236597421743 >5k 0.0013694390726675981 1.585788035799241 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCTT 8121 0.3769475740701287 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 7164 0.33252708048742785 No Hit GTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 6941 0.3221762235710828 No Hit TGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 6021 0.27947313674131813 No Hit GCCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 5920 0.27478508046978967 No Hit TTCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 4949 0.2297147573048968 No Hit GGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 4483 0.20808471549764646 No Hit ATCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 4399 0.20418573800449402 No Hit AGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 3278 0.1521529550304004 No Hit ACCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 2701 0.12537069296434153 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.39138307407453826 0.0 2 0.0 0.0 0.0 0.9142173893467866 0.0 3 0.0 0.0 0.0 3.1632311569148133 0.0 4 0.0 0.0 0.0 3.641877060598001 0.0 5 0.0 0.0 0.0 4.445484171775952 0.0 6 0.0 0.0 0.0 6.912747846163058 0.0 7 0.0 0.0 0.0 7.2527479668456944 0.0 8 0.0 0.0 0.0 7.858574803043616 0.0 9 0.0 0.0 0.0 8.245687568435178 0.0 10 0.0 0.0 0.0 9.592877125116795 0.0 11 0.0 0.0 0.0 10.736484356977382 0.0 12 0.0 0.0 0.0 11.198141858726121 0.0 13 0.0 0.0 0.0 11.434633410245306 0.0 14 0.0 0.0 0.0 11.59230991672434 0.0 15 0.0 0.0 0.0 11.82239600521906 0.0 16 0.0 0.0 0.0 12.316962733665953 0.0 17 0.0 0.0 0.0 12.956998455726414 0.0 18 4.641639872800501E-5 0.0 0.0 13.614904491297157 0.0 19 4.641639872800501E-5 0.0 0.0 14.098841864435338 0.0 20 4.641639872800501E-5 0.0 0.0 14.658623633095077 0.0 21 9.283279745601002E-5 0.0 0.0 15.459585009545533 0.0 22 9.283279745601002E-5 0.0 0.0 16.170730654457298 0.0 23 9.283279745601002E-5 0.0 0.0 16.849013489069634 0.0 24 9.283279745601002E-5 0.0 0.0 17.380852585695116 0.0 25 9.283279745601002E-5 0.0 0.0 17.854996098701687 0.0 26 9.283279745601002E-5 0.0 0.0 18.2788242354871 0.0 27 9.283279745601002E-5 0.0 0.0 18.75143600733565 0.0 28 9.283279745601002E-5 0.0 0.0 19.15618700424385 0.0 29 9.283279745601002E-5 0.0 0.0 19.655441788962275 0.0 30 9.283279745601002E-5 0.0 0.0 20.159059715161128 0.0 31 9.283279745601002E-5 0.0 0.0 20.636081044888837 0.0 32 9.283279745601002E-5 0.0 0.0 21.101869606124364 0.0 33 9.747443732881052E-4 0.0 0.0 21.579680014630448 0.0 34 9.747443732881052E-4 0.0 0.0 22.0743395758748 0.0 35 9.747443732881052E-4 0.0 0.0 22.616158198226803 0.0 36 9.747443732881052E-4 0.0 0.0 23.089930380043548 0.0 37 9.747443732881052E-4 0.0 0.0 23.59452305061569 0.0 38 9.747443732881052E-4 0.0 0.0 24.166094584552344 0.0 39 9.747443732881052E-4 0.0 0.0 25.315875197443756 0.0 40 9.747443732881052E-4 0.0 0.0 25.82111769759809 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTAC 35 1.02012564E-7 46.000004 46 ATCGTAC 35 1.02012564E-7 46.000004 12 CGGAATT 85 0.0 46.0 14 CTAGACG 30 1.8621668E-6 46.0 25 AGCGTAT 20 6.31269E-4 46.0 34 CGTGATA 20 6.31269E-4 46.0 20 CGACACG 20 6.31269E-4 46.0 18 GTTCGAC 25 3.4181576E-5 46.0 18 ACAATCG 20 6.31269E-4 46.0 33 ACGTATA 25 3.4181576E-5 46.0 17 CGATGCG 25 3.4181576E-5 46.0 1 ACCCGTT 20 6.31269E-4 46.0 26 CAATCGT 20 6.31269E-4 46.0 9 ATCATCG 25 3.4181576E-5 46.0 14 CCGTTGA 20 6.31269E-4 46.0 28 TACCGGA 30 1.8621668E-6 46.0 11 TTTAGCG 135 0.0 44.2963 1 ATTAGCG 55 4.7293724E-11 41.81818 1 TTTACGC 45 1.589433E-8 40.88889 25 TATTCCG 45 1.589433E-8 40.88889 13 >>END_MODULE