##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545625_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1083995 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.53962518277298 33.0 31.0 34.0 31.0 34.0 2 32.94864090701525 34.0 31.0 34.0 31.0 34.0 3 33.0203100567807 34.0 33.0 34.0 31.0 34.0 4 36.39472414540658 37.0 37.0 37.0 35.0 37.0 5 36.35864464319485 37.0 37.0 37.0 35.0 37.0 6 36.36716959026564 37.0 37.0 37.0 35.0 37.0 7 36.46342649181961 37.0 37.0 37.0 35.0 37.0 8 36.51214166117003 37.0 37.0 37.0 35.0 37.0 9 38.341663937564284 39.0 39.0 39.0 37.0 39.0 10 38.060205997260134 39.0 39.0 39.0 35.0 39.0 11 37.86491173852278 39.0 38.0 39.0 35.0 39.0 12 37.34668056586977 39.0 35.0 39.0 35.0 39.0 13 37.17217514840936 39.0 35.0 39.0 35.0 39.0 14 38.473974510952544 40.0 36.0 41.0 35.0 41.0 15 38.526414789736116 40.0 36.0 41.0 35.0 41.0 16 38.63621972426072 40.0 36.0 41.0 35.0 41.0 17 38.618258386800676 40.0 36.0 41.0 35.0 41.0 18 38.6309392570999 40.0 36.0 41.0 35.0 41.0 19 38.59066508609357 40.0 36.0 41.0 35.0 41.0 20 38.49225688310371 40.0 36.0 41.0 35.0 41.0 21 38.4591534093792 40.0 36.0 41.0 35.0 41.0 22 38.53999234313812 40.0 36.0 41.0 35.0 41.0 23 38.5569158529329 40.0 36.0 41.0 35.0 41.0 24 38.513913809565544 40.0 35.0 41.0 35.0 41.0 25 38.459196767512765 40.0 35.0 41.0 35.0 41.0 26 38.347963782120765 40.0 35.0 41.0 35.0 41.0 27 38.24813490837135 40.0 35.0 41.0 35.0 41.0 28 38.261487368484175 40.0 36.0 41.0 35.0 41.0 29 38.221933680505906 40.0 36.0 41.0 35.0 41.0 30 38.18980161347608 40.0 36.0 41.0 35.0 41.0 31 38.124185074654406 40.0 35.0 41.0 35.0 41.0 32 38.10079290033626 40.0 35.0 41.0 35.0 41.0 33 38.01183953800525 40.0 35.0 41.0 34.0 41.0 34 37.950916747770975 40.0 35.0 41.0 34.0 41.0 35 37.89296998602392 40.0 35.0 41.0 34.0 41.0 36 37.78040489116647 40.0 35.0 41.0 34.0 41.0 37 37.73367220328507 40.0 35.0 41.0 34.0 41.0 38 37.66323184147528 40.0 35.0 41.0 34.0 41.0 39 37.64459799168815 40.0 35.0 41.0 34.0 41.0 40 37.50376062620215 40.0 35.0 41.0 33.0 41.0 41 37.395950165821795 39.0 35.0 41.0 33.0 41.0 42 37.37141499730165 39.0 35.0 41.0 33.0 41.0 43 37.32679947785737 39.0 35.0 41.0 33.0 41.0 44 37.19850091559463 39.0 35.0 41.0 33.0 41.0 45 37.10834367317192 39.0 35.0 41.0 33.0 41.0 46 37.127592839450365 39.0 35.0 41.0 33.0 41.0 47 37.09495984760078 39.0 35.0 41.0 33.0 41.0 48 37.0333977555247 39.0 35.0 41.0 33.0 41.0 49 37.02256191218594 39.0 35.0 41.0 33.0 41.0 50 36.90784274835216 38.0 35.0 41.0 33.0 41.0 51 36.80342160249817 38.0 35.0 40.0 33.0 41.0 52 36.473788163229536 38.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 2.0 12 3.0 13 1.0 14 5.0 15 9.0 16 26.0 17 58.0 18 111.0 19 247.0 20 446.0 21 782.0 22 1144.0 23 1773.0 24 2464.0 25 3130.0 26 3826.0 27 4768.0 28 6116.0 29 7884.0 30 10460.0 31 13365.0 32 17911.0 33 24454.0 34 58290.0 35 160866.0 36 56286.0 37 74366.0 38 136971.0 39 497424.0 40 805.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.106661008583988 14.84822346966545 47.78435324886185 13.260762272888712 2 24.350389070060285 13.357626188312677 50.162500749542204 12.129483992084834 3 24.939875183926123 14.257907093667407 45.25352976720372 15.548687955202745 4 20.862273349969325 14.263257671852731 50.04137472958824 14.833094248589706 5 22.74466210637503 16.249798200176198 46.497354692595444 14.508185000853324 6 23.527045788956592 18.696027195697397 44.52511312321551 13.251813892130498 7 84.74660860981831 2.3647710552170444 7.726603904999561 5.162016429965083 8 86.76525260725373 2.4579449167200953 7.305476501275375 3.471325974750806 9 79.62324549467479 3.682581561723071 9.367847637673606 7.326325305928533 10 42.855271472654394 24.02077500357474 13.986688130480307 19.13726539329056 11 35.15108464522438 20.892993048860927 27.519499628688326 16.43642267722637 12 33.14120452585114 23.561824547161194 25.685635081342628 17.611335845645044 13 20.582475011416104 32.982808961295945 31.662138663001215 14.772577364286734 14 15.023962287648928 39.250273294618516 28.440629338696212 17.285135079036344 15 12.378931637138548 24.728804099649906 41.938754330047644 20.9535099331639 16 15.22663849925507 22.58820382012832 39.0052537142699 23.179903966346707 17 16.61419102486635 21.78137353032071 28.45871060290868 33.14572484190425 18 18.936065203252785 24.02501856558379 33.0376062620215 24.001309969141925 19 22.42122888020701 26.918574347667658 28.503083501307664 22.157113270817668 20 26.0743822619108 21.243548171347655 27.393392035941126 25.28867753080042 21 20.62417262072242 28.451330495066856 28.86895234756618 22.055544536644543 22 25.181481464397898 23.735349332792126 23.87437211426252 27.208797088547453 23 22.244475297395283 28.53223492728287 21.753329120521776 27.46996065480007 24 22.182205637479875 20.903601953883552 34.92211679943173 21.99207560920484 25 24.550389992573766 25.23932305960821 27.43831844242824 22.771968505389786 26 19.530809643955923 30.133810580307102 24.578434402372704 25.75694537336427 27 18.27591455680146 27.579924261643274 24.3678245748366 29.77633660671867 28 20.332473858274255 24.76819542525565 30.300785520228413 24.59854519624168 29 16.49786207500957 21.7627387580201 29.029838698517985 32.709560468452345 30 16.928399116232086 29.769694509661022 29.987776696386977 23.314129677719915 31 23.28673102735714 31.199774906710825 23.746696248598933 21.766797817333106 32 23.267634998316414 28.043302782761913 22.693185854178292 25.99587636474338 33 22.12897660967071 30.111301251389538 25.159710146264512 22.600011992675242 34 15.601455726271801 27.405753716576182 27.491086213497297 29.501704343654723 35 18.966969404840427 26.286560362363293 30.103736640851665 24.642733591944612 36 24.06690067758615 27.29154654772393 24.556939838283387 24.084612936406533 37 19.983487008703914 28.692660021494564 29.954012703010623 21.3698402667909 38 16.51483632304577 28.47347081859234 32.89194138349347 22.119751474868426 39 18.00792439079516 32.98207095051177 25.041074912707163 23.96892974598591 40 23.302413756521016 26.895972767402064 27.31377912259743 22.487834353479492 41 18.224346053256703 24.877882278054788 29.220153229489064 27.677618439199442 42 18.738370564439872 25.722074363811643 26.114603849648756 29.424951222099732 43 19.79012818324808 22.62538111338152 28.364337473881335 29.220153229489064 44 23.50047740072602 24.830280582475012 25.26220139391787 26.4070406228811 45 16.509670247556492 29.057790856968897 25.695505975581067 28.73703291989354 46 19.105161924178617 29.01932204484338 25.881207939151015 25.99430809182699 47 19.627950313423955 26.47263133132533 29.839713282810344 24.05970507244037 48 18.251744703619483 22.96228303636087 35.18881544656571 23.59715681345394 49 19.46770972190831 22.01237090576986 28.707420237178216 29.81249913514361 50 17.246205010170712 26.309254193976912 32.58474439457746 23.859796401274913 51 19.257007643024185 26.199106084437656 28.330665731853006 26.21322054068515 52 17.410504660999358 23.528337307828913 30.835197579324632 28.225960451847104 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 561.0 1 431.5 2 302.0 3 224.5 4 147.0 5 165.0 6 183.0 7 320.0 8 457.0 9 569.5 10 682.0 11 765.0 12 848.0 13 890.5 14 881.0 15 829.0 16 1250.0 17 1671.0 18 1495.5 19 1320.0 20 1377.0 21 1434.0 22 1680.0 23 1926.0 24 2449.5 25 2973.0 26 5152.0 27 7331.0 28 8015.0 29 8699.0 30 10249.0 31 11799.0 32 16400.5 33 21002.0 34 25589.5 35 30177.0 36 34898.5 37 39620.0 38 39378.5 39 51625.0 40 64113.0 41 73420.5 42 82728.0 43 98161.0 44 113594.0 45 123647.0 46 133700.0 47 129924.5 48 126149.0 49 110247.0 50 94345.0 51 81661.5 52 68978.0 53 59362.0 54 49746.0 55 46860.5 56 43975.0 57 38472.0 58 32969.0 59 30395.5 60 27822.0 61 25738.0 62 23654.0 63 20922.5 64 14368.5 65 10546.0 66 9029.0 67 7512.0 68 6614.0 69 5716.0 70 4565.5 71 3415.0 72 2651.5 73 1888.0 74 1452.0 75 1016.0 76 725.0 77 434.0 78 474.5 79 515.0 80 469.5 81 424.0 82 410.5 83 397.0 84 244.0 85 91.0 86 66.0 87 41.0 88 21.5 89 1.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1083995.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.264555099682383 #Duplication Level Percentage of deduplicated Percentage of total 1 65.47627749195493 9.994662454980396 2 12.344294180015352 3.768603173550658 3 5.8171204635863685 2.6638726751371213 4 3.4679450878669624 2.1174655550567243 5 2.326764989358165 1.7758516192034803 6 1.630092295044771 1.4929580193167173 7 1.1560714750016243 1.2352841710533364 8 0.8902322337643305 1.087119918704716 9 0.6793673807844337 0.9333216735219801 >10 4.03102618146168 11.7085117547005 >50 0.573642118107934 6.316332647096987 >100 1.5811464711139565 51.24705963854099 >500 0.01694301614664783 1.715439947382905 >1k 0.008471508073323916 3.365945892880704 >5k 6.051077195231367E-4 0.5775708588727818 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGCTT 6253 0.5768476791867121 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGCT 4608 0.4250942116891683 No Hit TGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 4278 0.39465126684163676 No Hit TTCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 3997 0.36872863804722344 No Hit GTCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 3927 0.36227104368562585 No Hit ATCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 3595 0.33164359614204864 No Hit GCCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 3251 0.2999091324221975 No Hit GGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 2618 0.24151402912375056 No Hit AGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 1785 0.16466865622073903 No Hit ACCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 1727 0.15931807803541528 No Hit CTCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 1629 0.15027744592917863 No Hit CCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGCT 1462 0.1348714708093672 No Hit TCCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC 1369 0.12629209544324466 No Hit TCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGCT 1118 0.1031370070895161 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5959437082274365 0.0 2 0.0 0.0 0.0 1.3237145927794869 0.0 3 0.0 0.0 0.0 4.367086564052417 0.0 4 0.0 0.0 0.0 5.0158902946969315 0.0 5 0.0 0.0 0.0 6.0670944054169995 0.0 6 0.0 0.0 0.0 9.550505306758795 0.0 7 0.0 0.0 0.0 9.984824653250246 0.0 8 0.0 0.0 0.0 10.829293493051168 0.0 9 9.225134802282298E-5 0.0 0.0 11.377266500306735 0.0 10 9.225134802282298E-5 0.0 0.0 13.201260153413992 0.0 11 9.225134802282298E-5 0.0 0.0 14.711506971895627 0.0 12 1.8450269604564597E-4 0.0 0.0 15.404775852287141 0.0 13 2.7675404406846897E-4 0.0 0.0 15.706530011669795 0.0 14 2.7675404406846897E-4 0.0 0.0 15.85274839828597 0.0 15 2.7675404406846897E-4 0.0 0.0 16.098874994810863 0.0 16 2.7675404406846897E-4 0.0 0.0 16.766867005844123 0.0 17 2.7675404406846897E-4 0.0 0.0 17.753126167556122 0.0 18 2.7675404406846897E-4 0.0 0.0 18.882467170051523 0.0 19 2.7675404406846897E-4 0.0 0.0 19.47389056222584 0.0 20 2.7675404406846897E-4 0.0 0.0 20.200093173861504 0.0 21 2.7675404406846897E-4 0.0 0.0 21.230909736668526 0.0 22 2.7675404406846897E-4 0.0 0.0 22.025193843145033 0.0 23 2.7675404406846897E-4 0.0 0.0 22.928888048376606 0.0 24 3.6900539209129194E-4 0.0 0.0 23.582950105858423 0.0 25 3.6900539209129194E-4 0.0 0.0 24.17492700612088 0.0 26 3.6900539209129194E-4 0.0 0.0 24.65694029954013 0.0 27 3.6900539209129194E-4 0.0 0.0 25.1220715962712 0.0 28 3.6900539209129194E-4 0.0 0.0 25.59190771175144 0.0 29 3.6900539209129194E-4 0.0 0.0 26.11709463604537 0.0 30 3.6900539209129194E-4 0.0 0.0 26.725400024907863 0.0 31 3.6900539209129194E-4 0.0 0.0 27.213870912688712 0.0 32 3.6900539209129194E-4 0.0 0.0 27.69385467645146 0.0 33 3.6900539209129194E-4 0.0 0.0 28.13306334438812 0.0 34 3.6900539209129194E-4 0.0 0.0 28.595242597982462 0.0 35 0.0026752890926618664 0.0 0.0 29.252164447252987 0.0 36 0.0026752890926618664 0.0 0.0 29.738144548637216 0.0 37 0.0026752890926618664 0.0 0.0 30.214438258479053 0.0 38 0.0026752890926618664 0.0 0.0 30.686488406311838 0.0 39 0.0027675404406846895 0.0 0.0 31.14276357363272 0.0 40 0.0027675404406846895 0.0 0.0 31.58593904953436 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGACAC 35 1.019489E-7 46.000004 20 TCACGCT 40 5.6115823E-9 46.000004 38 TCACGCA 40 5.6115823E-9 46.000004 39 AAGTATC 35 1.019489E-7 46.000004 22 TATCACG 35 1.019489E-7 46.000004 24 GTACCTA 20 6.311293E-4 46.000004 40 AACCGAG 20 6.311293E-4 46.000004 11 TCGTTCC 40 5.6115823E-9 46.000004 30 TCCATCG 35 1.019489E-7 46.000004 23 GCGACTT 20 6.311293E-4 46.000004 9 CTCGTGA 20 6.311293E-4 46.000004 16 CTCGTCT 35 1.019489E-7 46.000004 25 CGAGTTT 20 6.311293E-4 46.000004 14 GTCGACG 35 1.019489E-7 46.000004 15 GTCGACC 20 6.311293E-4 46.000004 40 CGACGTG 35 1.019489E-7 46.000004 12 CCGATTA 40 5.6115823E-9 46.000004 11 CACGGGT 40 5.6115823E-9 46.000004 14 CACGGAC 20 6.311293E-4 46.000004 37 ACGCATA 20 6.311293E-4 46.000004 10 >>END_MODULE