##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545624_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1362724 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.89655278691797 31.0 31.0 34.0 31.0 34.0 2 32.55192687587508 34.0 31.0 34.0 31.0 34.0 3 32.52140638896798 34.0 31.0 34.0 31.0 34.0 4 36.004355981108425 37.0 35.0 37.0 35.0 37.0 5 35.77778258840382 37.0 35.0 37.0 35.0 37.0 6 35.77334588662121 37.0 35.0 37.0 35.0 37.0 7 35.75483883750488 37.0 35.0 37.0 33.0 37.0 8 35.717264097498834 37.0 35.0 37.0 33.0 37.0 9 37.93158996245755 39.0 38.0 39.0 35.0 39.0 10 37.85576389643097 39.0 38.0 39.0 35.0 39.0 11 37.69383235343327 39.0 38.0 39.0 35.0 39.0 12 37.15589877333928 39.0 37.0 39.0 33.0 39.0 13 36.92726920491604 39.0 37.0 39.0 33.0 39.0 14 37.532313953522504 40.0 35.0 41.0 33.0 41.0 15 37.39318526715608 40.0 35.0 41.0 32.0 41.0 16 37.32010810699745 40.0 35.0 41.0 32.0 41.0 17 37.46786143048776 40.0 35.0 41.0 32.0 41.0 18 37.53910036074803 40.0 35.0 41.0 32.0 41.0 19 37.53501589463457 39.0 35.0 41.0 32.0 41.0 20 37.49822120987082 39.0 35.0 41.0 32.0 41.0 21 37.48511510768138 39.0 35.0 41.0 32.0 41.0 22 37.406890169983065 39.0 35.0 41.0 32.0 41.0 23 37.33154549270432 39.0 35.0 41.0 32.0 41.0 24 37.31438647884678 39.0 35.0 41.0 32.0 41.0 25 37.257807156841736 39.0 35.0 41.0 32.0 41.0 26 37.17360668778124 39.0 35.0 41.0 32.0 41.0 27 37.082688057156105 39.0 35.0 41.0 32.0 41.0 28 36.99474435028663 39.0 35.0 41.0 31.0 41.0 29 36.91789826846816 39.0 35.0 41.0 31.0 41.0 30 36.83629773894054 39.0 35.0 41.0 31.0 41.0 31 36.72770568361605 39.0 35.0 41.0 31.0 41.0 32 36.62026353098646 39.0 35.0 41.0 31.0 41.0 33 36.47792216178772 38.0 35.0 41.0 30.0 41.0 34 36.41764509908096 38.0 35.0 41.0 30.0 41.0 35 36.332134019801515 38.0 35.0 41.0 30.0 41.0 36 36.236480020899315 38.0 35.0 41.0 30.0 41.0 37 36.08320246799792 38.0 35.0 41.0 30.0 41.0 38 36.0113918885996 38.0 35.0 41.0 30.0 41.0 39 35.935535735776284 38.0 35.0 40.0 29.0 41.0 40 35.810090671331835 38.0 35.0 40.0 29.0 41.0 41 35.73043771152486 38.0 35.0 40.0 29.0 41.0 42 35.59210302306263 38.0 34.0 40.0 28.0 41.0 43 35.46157402379352 37.0 34.0 40.0 28.0 41.0 44 35.378055277517674 37.0 34.0 40.0 28.0 41.0 45 35.34615153178487 37.0 34.0 40.0 28.0 41.0 46 35.258109492457756 37.0 34.0 40.0 28.0 41.0 47 35.15097407839005 36.0 34.0 40.0 28.0 41.0 48 35.09919029825555 36.0 34.0 40.0 28.0 41.0 49 35.02120825640409 36.0 34.0 40.0 28.0 41.0 50 34.906125525051294 36.0 34.0 40.0 27.0 41.0 51 34.705382014259676 36.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 7.0 10 11.0 11 16.0 12 9.0 13 17.0 14 23.0 15 63.0 16 97.0 17 189.0 18 398.0 19 738.0 20 1385.0 21 2229.0 22 3539.0 23 5137.0 24 7393.0 25 10651.0 26 14318.0 27 17257.0 28 20213.0 29 23645.0 30 28655.0 31 35166.0 32 43219.0 33 56685.0 34 93290.0 35 163787.0 36 100711.0 37 141786.0 38 209307.0 39 382610.0 40 169.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.099031058380127 91.5182384694186 2.9161444283655387 3.4665860438357288 2 3.2522359626747606 2.651453999489258 91.54722452969199 2.5490855081439823 3 27.289091554856306 16.081686386971977 43.56612197334163 13.06310008483009 4 27.61556999069511 15.807236094763136 43.21865616221627 13.35853775232549 5 23.99378010514235 13.741447277658573 46.51638923215559 15.748383385043486 6 22.962977095875615 14.58960141598739 47.4248637288255 15.022557759311498 7 22.838373727915556 16.37374846263807 45.027386323276026 15.760491486170347 8 25.416738826057223 19.43313539645592 43.417375785558924 11.732749991927932 9 84.2156592237313 3.49975490268022 8.397445117279801 3.887140756308688 10 83.99998825881103 3.876280156510049 8.674317029714015 3.4494145549649087 11 78.2884135011932 5.844396957857938 9.695653705372473 6.17153583557639 12 43.26613459511977 21.485348463812187 17.27194941895791 17.976567522110127 13 36.2309609282584 23.469022340547316 22.242288240318654 18.05772849087563 14 28.860869845984954 24.796657283499812 25.92072936265891 20.421743507856323 15 22.730648319102034 26.879617589475195 31.481356459561876 18.90837763186089 16 18.764034389942495 32.0792031255045 30.415550030673856 18.741212453879143 17 18.64442102729533 22.303782717556896 38.17317373143791 20.878622523709865 18 22.979121230711428 21.412186180033522 34.29865475327359 21.31003783598146 19 23.40085006208154 20.762531517754145 28.104737276220277 27.731881143944044 20 24.87092030374456 21.511692756566994 31.45868128836067 22.158705651327782 21 27.068503967054227 24.740886635885182 27.204408229399352 20.986201167661243 22 27.782001344366137 23.773926341650984 25.54141557644835 22.902656737534528 23 26.172284336373323 24.46753708014242 28.231762264405706 21.128416319078553 24 29.596748864773794 20.710429991693108 24.880606784646048 24.812214358887054 25 26.70518755081733 25.236438192913607 23.082370311229568 24.976003945039494 26 26.43807550171568 22.486284823632666 28.669415083318412 22.406224591333242 27 28.054617075798184 22.656678828581576 26.659617061121693 22.62908703449855 28 24.66244081706934 26.851291971081455 24.252233027377518 24.23403418447169 29 22.487605707391957 26.119155456277284 26.594673609623076 24.798565226707684 30 22.948080462368022 24.63433534596881 28.928234917708938 23.489349273954225 31 22.446218016267416 24.654368749651432 28.364951376801173 24.534461857279975 32 24.28701629970559 24.719165436287906 28.77772755158051 22.21609071242599 33 26.399109430816516 24.55141319885758 25.808967920136432 23.24050945018947 34 25.83883456958269 25.500761709634528 25.991616791074346 22.668786929708435 35 25.06912625006971 24.588911621135313 25.59175592416366 24.75020620463131 36 23.503365318288957 25.046010784282068 26.4730055389059 24.977618358523078 37 23.468215133805526 25.162321937531 29.60841667131422 21.76104625734925 38 27.244475036764598 25.824524995523674 24.66831141155509 22.26268855615664 39 24.656863752307878 27.84415626348402 24.962281430429055 22.536698553779047 40 23.878789835652707 26.377094701494947 26.768076294245937 22.97603916860641 41 22.705624910106522 26.230329839351178 25.896586542836257 25.167458707706036 42 26.505293808577523 23.21577957091825 26.99240638603268 23.286520234471546 43 23.080609132883843 24.05696237829524 26.934874560072323 25.927553928748594 44 22.329980245449555 25.656992905386566 25.859234885420673 26.153791963743206 45 22.701075199380067 22.390814280808147 27.72483643056114 27.18327408925065 46 23.873212770891243 23.991358484916976 26.964594444656438 25.170834299535343 47 20.72906912918537 26.413492387306604 26.84732931980357 26.010109163704463 48 23.299508924771267 24.366416090125366 26.128254877730196 26.205820107373174 49 22.301067567607234 25.458199899612833 28.989802777378248 23.250929755401682 50 22.755524963235402 24.462180162674173 29.50626832726216 23.276026546828266 51 22.56340975868921 23.74560072325724 27.19897792950003 26.492011588553517 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 554.0 1 806.0 2 1058.0 3 3122.5 4 5187.0 5 3595.0 6 2003.0 7 2261.5 8 2520.0 9 2694.0 10 2868.0 11 2770.0 12 2672.0 13 2812.5 14 2953.0 15 3236.0 16 3519.0 17 3276.5 18 3034.0 19 3667.5 20 4301.0 21 4046.5 22 3792.0 23 4381.5 24 4971.0 25 5026.5 26 6067.5 27 7053.0 28 10068.0 29 13083.0 30 17563.5 31 22044.0 32 26595.5 33 31147.0 34 32410.0 35 33673.0 36 38145.5 37 42618.0 38 50032.0 39 57446.0 40 69071.5 41 80697.0 42 88499.5 43 96302.0 44 107382.5 45 118463.0 46 127401.0 47 136339.0 48 131716.0 49 127093.0 50 113002.5 51 98912.0 52 91308.5 53 83705.0 54 80763.5 55 77822.0 56 75912.0 57 74002.0 58 66837.5 59 59673.0 60 57675.0 61 55677.0 62 45587.0 63 35497.0 64 29044.0 65 22591.0 66 19910.0 67 17229.0 68 14208.5 69 11188.0 70 9112.0 71 7036.0 72 5933.5 73 4831.0 74 3578.0 75 1510.5 76 696.0 77 514.5 78 333.0 79 404.0 80 475.0 81 320.5 82 166.0 83 106.0 84 46.0 85 40.0 86 34.0 87 19.5 88 5.0 89 4.5 90 4.0 91 4.5 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1362724.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.648865546709985 #Duplication Level Percentage of deduplicated Percentage of total 1 72.74744134329156 12.111623697916324 2 11.089692371441204 3.692615944930001 3 4.550447696738422 2.2727937564100236 4 2.519051781070689 1.6775741763298486 5 1.461949913998818 1.2169903777095272 6 0.9331901700788853 0.932193460269287 7 0.6410071025237463 0.7470428745082797 8 0.44266691083249016 0.589592150434207 9 0.31671377637742 0.4745632571728596 >10 2.544273169715642 9.490267079629115 >50 0.9859755964916896 12.098477606125828 >100 1.751665931696772 51.36701544444675 >500 0.008846797634832182 1.0007560912267786 >1k 0.007077438107865745 2.3284940828911833 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 4770 0.3500341962128795 TruSeq Adapter, Index 20 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3068 0.22513729852853548 No Hit ATCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTG 2944 0.21603787707562208 TruSeq Adapter, Index 20 (95% over 22bp) ACCATACGGAAAGAGTTCCGAACCCGCATGGTTATGAACAATGGACTCAAC 2101 0.1541764876820251 No Hit ATGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCT 2030 0.14896633507592147 TruSeq Adapter, Index 20 (95% over 21bp) ATGGCTCTGGGCTCCTCTACAAAAACAAAAGTTAAAAAAAAACACACAAAA 1975 0.1449303013669679 No Hit CTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGCT 1867 0.13700499881120462 TruSeq Adapter, Index 20 (95% over 24bp) ATTGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTC 1861 0.13656470422477332 No Hit CCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 1683 0.12350263149397823 TruSeq Adapter, Index 23 (95% over 22bp) ATGCCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTC 1613 0.11836586131894647 No Hit ATATCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTC 1500 0.11007364660782373 No Hit ATGTCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTC 1385 0.10163466703455724 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.155497371441319 0.0 2 0.0 0.0 0.0 0.710048403051535 0.0 3 0.0 0.0 0.0 1.027354035006355 0.0 4 0.0 0.0 0.0 1.354492912724807 0.0 5 0.0 0.0 0.0 2.5851162818002766 0.0 6 0.0 0.0 0.0 2.857658630801248 0.0 7 0.0 0.0 0.0 3.295384832145027 0.0 8 0.0 0.0 0.0 4.666168644567792 0.0 9 0.0 0.0 0.0 4.835461913050625 0.0 10 0.0 0.0 0.0 5.163554762373011 0.0 11 0.0 0.0 0.0 5.410706790223112 0.0 12 0.0 0.0 0.0 6.081715739944405 0.0 13 0.0 0.0 0.0 6.6868272665631485 0.0 14 0.0 0.0 0.0 6.949316222507272 0.0 15 0.0 0.0 0.0 7.088889606405993 0.0 16 7.338243107188249E-5 0.0 0.0 7.193899865269857 0.0 17 7.338243107188249E-5 0.0 0.0 7.326868830372107 0.0 18 7.338243107188249E-5 0.0 0.0 7.6375700435304585 0.0 19 1.4676486214376498E-4 0.0 0.0 8.014168679791359 0.0 20 1.4676486214376498E-4 0.0 0.0 8.43516368685075 0.0 21 2.9352972428752996E-4 0.0 0.0 8.691782048309122 0.0 22 2.9352972428752996E-4 0.0 0.0 8.98876074685703 0.0 23 3.6691215535941245E-4 0.0 0.0 9.44519946812414 0.0 24 5.136770175031774E-4 0.0 0.0 9.82722840428436 0.0 25 5.136770175031774E-4 0.0 0.0 10.208376751271718 0.0 26 7.338243107188249E-4 0.0 0.0 10.523921204880812 0.0 27 7.338243107188249E-4 0.0 0.0 10.819872549393715 0.0 28 7.338243107188249E-4 0.0 0.0 11.085443567442857 0.0 29 7.338243107188249E-4 0.0 0.0 11.367085337896743 0.0 30 7.338243107188249E-4 0.0 0.0 11.625611642562983 0.0 31 7.338243107188249E-4 0.0 0.0 11.911289446725823 0.0 32 8.805891728625899E-4 0.0 0.0 12.220963305849168 0.0 33 8.805891728625899E-4 0.0 0.0 12.49159771164227 0.0 34 8.805891728625899E-4 0.0 0.0 12.782118756255851 0.0 35 8.805891728625899E-4 0.0 0.0 13.066475676659397 0.0 36 8.805891728625899E-4 0.0 0.0 13.355308925358326 0.0 37 9.539716039344724E-4 0.0 0.0 13.710773421470526 0.0 38 9.539716039344724E-4 0.0 0.0 14.001074318790891 0.0 39 0.0012475013282220023 0.0 0.0 14.328800255957919 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAACA 45 3.8562575E-10 45.000004 36 AACGTAT 25 3.8911894E-5 45.0 20 AACGTAA 25 3.8911894E-5 45.0 30 AAGTAAC 20 7.033749E-4 45.0 35 GATACGT 50 2.1827873E-11 45.0 11 ACCGGTG 35 1.2121563E-7 45.0 34 CGAACTA 25 3.8911894E-5 45.0 26 GTTTCGA 40 6.8175723E-9 45.0 18 GACGTAA 40 6.8175723E-9 45.0 12 ATTACGC 35 1.2121563E-7 45.0 1 TCTTACG 20 7.033749E-4 45.0 3 ATAGCCG 35 1.2121563E-7 45.0 1 TAACGGT 40 6.8175723E-9 45.0 11 TAACGCA 20 7.033749E-4 45.0 12 TGACGGA 20 7.033749E-4 45.0 39 TAGCCGT 20 7.033749E-4 45.0 19 GACTTAT 20 7.033749E-4 45.0 11 ATTCCCG 50 2.1827873E-11 45.0 31 ACGATCT 20 7.033749E-4 45.0 14 CGCTAAC 25 3.8911894E-5 45.0 38 >>END_MODULE