##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545618_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2493516 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.88148461850656 31.0 31.0 34.0 31.0 34.0 2 32.54382245792688 34.0 31.0 34.0 31.0 34.0 3 32.50787723038473 34.0 31.0 34.0 31.0 34.0 4 35.98713703862337 37.0 35.0 37.0 35.0 37.0 5 35.75573647812968 37.0 35.0 37.0 35.0 37.0 6 35.75837732743644 37.0 35.0 37.0 35.0 37.0 7 35.73971251838769 37.0 35.0 37.0 33.0 37.0 8 35.707573963832594 37.0 35.0 37.0 33.0 37.0 9 37.894057627863624 39.0 38.0 39.0 35.0 39.0 10 37.8261559179889 39.0 38.0 39.0 35.0 39.0 11 37.64258220119702 39.0 37.0 39.0 35.0 39.0 12 37.148946307142204 39.0 37.0 39.0 33.0 39.0 13 36.9324592262492 39.0 37.0 39.0 33.0 39.0 14 37.71832504784409 40.0 36.0 41.0 33.0 41.0 15 37.60637589652523 40.0 36.0 41.0 33.0 41.0 16 37.608132853368495 40.0 36.0 41.0 32.0 41.0 17 37.67285952847305 40.0 36.0 41.0 33.0 41.0 18 37.7265223082587 40.0 36.0 41.0 33.0 41.0 19 37.69228711586371 40.0 35.0 41.0 33.0 41.0 20 37.64895914042661 40.0 36.0 41.0 33.0 41.0 21 37.64394052414342 40.0 36.0 41.0 33.0 41.0 22 37.59111270992446 40.0 35.0 41.0 32.0 41.0 23 37.53116603222117 40.0 35.0 41.0 32.0 41.0 24 37.48384449909285 40.0 35.0 41.0 32.0 41.0 25 37.41384735449863 39.0 35.0 41.0 32.0 41.0 26 37.30703873566482 39.0 35.0 41.0 32.0 41.0 27 37.220253248826154 39.0 35.0 41.0 32.0 41.0 28 37.11499665532525 39.0 35.0 41.0 32.0 41.0 29 37.05466257284894 39.0 35.0 41.0 31.0 41.0 30 36.98893089115931 39.0 35.0 41.0 31.0 41.0 31 36.93545459503769 39.0 35.0 41.0 31.0 41.0 32 36.82623612601644 39.0 35.0 41.0 31.0 41.0 33 36.7249799078891 39.0 35.0 41.0 31.0 41.0 34 36.640307100495846 39.0 35.0 41.0 30.0 41.0 35 36.54358664632591 39.0 35.0 41.0 30.0 41.0 36 36.4440007603721 39.0 35.0 41.0 30.0 41.0 37 36.274658353906695 38.0 35.0 41.0 30.0 41.0 38 36.22167413403403 38.0 35.0 41.0 30.0 41.0 39 36.16699872790068 38.0 35.0 41.0 30.0 41.0 40 36.0905195715608 38.0 35.0 41.0 30.0 41.0 41 36.03164728038641 38.0 35.0 40.0 30.0 41.0 42 35.88028631057511 38.0 35.0 40.0 29.0 41.0 43 35.76369712486304 38.0 35.0 40.0 29.0 41.0 44 35.69001161412239 38.0 35.0 40.0 29.0 41.0 45 35.65358874777623 38.0 35.0 40.0 29.0 41.0 46 35.60020348776587 38.0 34.0 40.0 29.0 41.0 47 35.5046580811994 37.0 34.0 40.0 28.0 41.0 48 35.41778115720934 37.0 34.0 40.0 28.0 41.0 49 35.37043516063262 37.0 34.0 40.0 28.0 41.0 50 35.272485919480765 37.0 34.0 40.0 28.0 41.0 51 35.10429449821056 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 11.0 10 18.0 11 35.0 12 27.0 13 29.0 14 50.0 15 72.0 16 138.0 17 289.0 18 659.0 19 1313.0 20 2314.0 21 3830.0 22 5945.0 23 8994.0 24 12611.0 25 17947.0 26 24010.0 27 29720.0 28 35125.0 29 41848.0 30 49897.0 31 61494.0 32 76458.0 33 97872.0 34 155891.0 35 282445.0 36 186681.0 37 250315.0 38 381274.0 39 765770.0 40 431.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.2735767486553127 90.84637916901275 3.306936871469844 3.573107210862092 2 3.50918141291253 2.8850426466082433 90.53031943649049 3.0754565039887454 3 28.52149334513995 15.9756745094076 42.51743321478587 12.985398930666578 4 27.867757816673322 15.69169798790142 42.38083894388486 14.059705251540395 5 25.180107125841584 14.071936975740279 46.210331114779294 14.537624783638844 6 23.235102562004815 14.606804207392294 47.21128719446757 14.946806036135321 7 23.048899626070178 17.37325928528231 43.852054689041495 15.725786399606017 8 25.805288596503896 19.844829549920675 42.49970724069948 11.850174612875955 9 81.87896127396014 4.447735647174512 9.123221988549501 4.550081090315843 10 83.23142903434348 4.539253006597913 8.557996018473514 3.6713219405851016 11 76.49808543438262 6.963981783152786 9.836231249368362 6.701701533096238 12 41.38902657933617 24.934389833472093 16.227607923911457 17.448975663280283 13 33.18887867573338 23.971412254824113 24.291161556613233 18.548547512829273 14 29.91382449521078 22.852750894720547 27.411053307859262 19.82237130220941 15 22.519967788456142 27.26663875427308 31.049570165180413 19.163823292090363 16 19.12668697533924 32.31870178494945 28.933241254517718 19.6213699851936 17 18.555244883128882 24.39555230445684 37.46288373525576 19.586319077158517 18 21.215223804459246 21.282117299427796 36.117875321433665 21.38478357467929 19 21.063710840435753 21.52490699879207 30.120039334016706 27.29134282675547 20 22.51074386528901 22.929309457007697 31.76574764308711 22.79419903461618 21 25.758366900392858 25.131982309317447 27.279832974803455 21.829817815486244 22 27.538543967634453 22.356142892205224 27.322944789606325 22.782368350554 23 25.426385874403856 24.98560265905653 27.629459766851305 21.95855169968831 24 27.741911421462706 22.67136044043832 25.060476852765333 24.526251285333643 25 26.38246556268338 24.674916864379455 24.467338489105344 24.47527908383183 26 26.21888129051508 21.19244472463782 30.61379995155435 21.97487403329275 27 26.54167849735073 23.986451259987902 26.098007793011956 23.373862449649412 28 23.143785722650264 27.158678749203936 25.233445464155835 24.464090063989964 29 21.33324991698469 26.86611996875095 26.43776899767236 25.362861116591993 30 20.934455604054676 26.617475083376245 29.510779156821133 22.937290155747945 31 21.53585539455131 24.53683874496895 27.74804733556953 26.17925852491021 32 22.43157854210681 25.62578303086886 28.00735988860709 23.93527853841724 33 24.505637822255803 26.935058768421776 25.229836102916526 23.329467306405892 34 26.12002489657175 24.504354493815157 25.16743425749023 24.208186352122866 35 25.06003570861386 26.203361037186045 25.16554936884303 23.571053885357063 36 23.51703377880872 23.95220243222823 27.14841212167879 25.38235166728427 37 22.207517417173182 24.869621851233358 27.88039058101091 25.042470150582552 38 24.41993554482907 27.742111941531554 23.31101946007164 24.526933053567735 39 24.906036295736623 28.660253232784548 25.302263951785353 21.13144651969348 40 23.437748143585203 25.83304057403281 27.610330152282963 23.118881130099027 41 22.487684057371197 26.726437688789645 25.66849380553403 25.117384448305124 42 24.584562521355387 24.030325051052408 27.66286641032181 23.722246017270393 43 21.8289355271833 24.79262214479474 27.485807189526756 25.8926351384952 44 21.926709112754843 26.273101917132273 25.157087421937536 26.643101548175345 45 21.821756908718452 24.324407784028658 26.6732196625167 27.18061564473619 46 23.74586728138099 24.907439936218577 26.241900994419126 25.104791787981306 47 21.62191860810197 25.998630046889616 26.40576599468381 25.973685350324605 48 21.496272732960207 27.117612239103337 25.093442352084367 26.292672675852092 49 21.9859427410933 25.85413528527589 28.035432698246172 24.124489275384636 50 21.336899382237775 22.907091833379052 30.35978112833445 25.396227656048726 51 20.729203261579233 23.90014742235462 28.525704266585816 26.844945049480334 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 584.0 1 1572.0 2 2560.0 3 6887.5 4 11215.0 5 7834.5 6 4454.0 7 4418.0 8 4382.0 9 4584.0 10 4786.0 11 5030.0 12 5274.0 13 5280.5 14 5287.0 15 5550.5 16 5814.0 17 5970.5 18 6127.0 19 6654.0 20 7181.0 21 7798.0 22 8415.0 23 9187.5 24 9960.0 25 13266.5 26 20304.5 27 24036.0 28 27773.5 29 31511.0 30 40959.0 31 50407.0 32 52895.5 33 55384.0 34 63369.0 35 71354.0 36 83044.5 37 94735.0 38 105370.5 39 116006.0 40 132340.0 41 148674.0 42 160424.0 43 172174.0 44 178304.0 45 184434.0 46 198997.5 47 213561.0 48 220485.0 49 227409.0 50 209645.5 51 191882.0 52 169213.5 53 146545.0 54 141424.0 55 136303.0 56 138394.5 57 140486.0 58 133826.0 59 127166.0 60 109430.5 61 91695.0 62 77896.5 63 64098.0 64 53239.5 65 42381.0 66 33804.0 67 25227.0 68 22075.5 69 18924.0 70 15738.0 71 12552.0 72 10023.0 73 7494.0 74 5424.0 75 2416.5 76 1479.0 77 1152.0 78 825.0 79 599.0 80 373.0 81 273.5 82 174.0 83 121.5 84 69.0 85 96.5 86 124.0 87 79.5 88 35.0 89 22.0 90 9.0 91 15.0 92 21.0 93 10.5 94 0.0 95 1.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2493516.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.338635946956506 #Duplication Level Percentage of deduplicated Percentage of total 1 72.0744508904282 11.055237632850732 2 10.773199895026107 3.30492382347191 3 4.5023600081319515 2.071801832006164 4 2.6508444561188242 1.6264135225765828 5 1.623855777127959 1.2453866297863954 6 1.100352657467519 1.0126745295696242 7 0.8149015765242718 0.8749635030434704 8 0.5817056943336645 0.7138057498924512 9 0.44827410976505044 0.6188322036718915 >10 2.684867892784465 8.416080720244647 >50 0.8541503740010957 9.75553378691523 >100 1.8715766886877812 55.41635842701736 >500 0.013148634867010843 1.371720794259654 >1k 0.005785399341484771 1.937358477616114 >5k 5.259453946804337E-4 0.5789083670777944 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 8582 0.3441726461751198 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5770 0.23140015945355874 No Hit ATGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCT 3876 0.15544315737296252 No Hit ATCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTG 3658 0.14670048237107763 No Hit ATTGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTC 3190 0.1279318039266642 No Hit ATGCCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTC 3174 0.12729013970634237 No Hit CTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCT 2894 0.1160610158507104 No Hit ATGTCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTC 2846 0.11413602318974493 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2688 0.10779958901406689 No Hit ATATCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTC 2687 0.10775948500029676 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.0104013770114166E-5 0.0 0.0 0.13298490966169857 0.0 2 4.0104013770114166E-5 0.0 0.0 0.6355684102287693 0.0 3 4.0104013770114166E-5 0.0 0.0 0.8611935916994317 0.0 4 8.020802754022833E-5 0.0 0.0 1.1642997277739546 0.0 5 1.203120413103425E-4 0.0 0.0 2.3575144494761613 0.0 6 1.203120413103425E-4 0.0 0.0 2.6196743874913975 0.0 7 1.203120413103425E-4 0.0 0.0 3.0548430409109066 0.0 8 1.203120413103425E-4 0.0 0.0 4.404503520330329 0.0 9 1.203120413103425E-4 0.0 0.0 4.5641977031629235 0.0 10 1.203120413103425E-4 0.0 0.0 4.8800569156163425 0.0 11 1.203120413103425E-4 0.0 0.0 5.1216835985812805 0.0 12 2.0052006885057085E-4 0.0 0.0 5.837620452405359 0.0 13 2.0052006885057085E-4 0.0 0.0 6.4706623097666105 0.0 14 2.40624082620685E-4 0.0 0.0 6.7163796021361 0.0 15 2.40624082620685E-4 0.0 0.0 6.861796756066534 0.0 16 2.40624082620685E-4 0.0 0.0 6.963861471111475 0.0 17 2.40624082620685E-4 0.0 0.0 7.096044300497771 0.0 18 2.40624082620685E-4 0.0 0.0 7.39421764287857 0.0 19 2.8072809639079915E-4 0.0 0.0 7.786595313605367 0.0 20 2.8072809639079915E-4 0.0 0.0 8.213342124133153 0.0 21 3.609361239310275E-4 0.0 0.0 8.486851498045331 0.0 22 4.010401377011417E-4 0.0 0.0 8.776242061410475 0.0 23 4.4114415147125587E-4 0.0 0.0 9.231302305659959 0.0 24 4.4114415147125587E-4 0.0 0.0 9.637154925013515 0.0 25 5.213521790114842E-4 0.0 0.0 10.06763140882192 0.0 26 5.614561927815983E-4 0.0 0.0 10.421589434356948 0.0 27 6.416642203218267E-4 0.0 0.0 10.728545555753403 0.0 28 6.416642203218267E-4 0.0 0.0 11.010958020722546 0.0 29 6.817682340919408E-4 0.0 0.0 11.267543500823736 0.0 30 6.817682340919408E-4 0.0 0.0 11.530826351224537 0.0 31 7.21872247862055E-4 0.0 0.0 11.827034596930599 0.0 32 7.619762616321692E-4 0.0 0.0 12.152719292757697 0.0 33 8.020802754022834E-4 0.0 0.0 12.465490496150817 0.0 34 8.020802754022834E-4 0.0 0.0 12.768235696101408 0.0 35 8.421842891723976E-4 0.0 0.0 13.070700167955609 0.0 36 8.421842891723976E-4 0.0 0.0 13.3800224261645 0.0 37 8.822883029425117E-4 0.0 0.0 13.739915845737505 0.0 38 9.223923167126259E-4 0.0 0.0 14.066603141908855 0.0 39 0.0010026003442528543 0.0 0.0 14.389320140716963 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACG 45 3.8562575E-10 45.000004 34 CCGATAG 45 3.8562575E-10 45.000004 13 ATTACGC 140 0.0 45.000004 1 CCCGTAA 35 1.212702E-7 45.000004 18 CGTAAGT 35 1.212702E-7 45.000004 20 CTAGCGA 45 3.8562575E-10 45.000004 16 CTATGCG 20 7.0348755E-4 45.0 20 CGTATCA 20 7.0348755E-4 45.0 40 CGAGTTA 25 3.8921236E-5 45.0 8 CACTCGA 20 7.0348755E-4 45.0 31 CGGATTA 25 3.8921236E-5 45.0 8 GTATCGC 20 7.0348755E-4 45.0 10 ACGTATC 20 7.0348755E-4 45.0 39 ACGTAAG 25 3.8921236E-5 45.0 38 CGGTCCA 40 6.8212103E-9 45.0 14 TCGACGA 20 7.0348755E-4 45.0 30 ATACCCG 20 7.0348755E-4 45.0 45 CGTATTA 30 2.1665273E-6 44.999996 30 CTAAGCG 30 2.1665273E-6 44.999996 45 CGATCAA 30 2.1665273E-6 44.999996 42 >>END_MODULE