##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545617_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2044901 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.533046832096026 33.0 31.0 34.0 31.0 34.0 2 32.942825104980635 34.0 31.0 34.0 31.0 34.0 3 33.021028890885184 34.0 33.0 34.0 31.0 34.0 4 36.40252364295387 37.0 37.0 37.0 35.0 37.0 5 36.38437264200076 37.0 37.0 37.0 35.0 37.0 6 36.386101821066156 37.0 37.0 37.0 35.0 37.0 7 36.47567192739404 37.0 37.0 37.0 35.0 37.0 8 36.5122878809292 37.0 37.0 37.0 35.0 37.0 9 38.31378829586371 39.0 39.0 39.0 37.0 39.0 10 38.05684529471109 39.0 39.0 39.0 35.0 39.0 11 37.907335367335634 39.0 38.0 39.0 35.0 39.0 12 37.576727186303884 39.0 37.0 39.0 35.0 39.0 13 37.5018883554754 39.0 37.0 39.0 35.0 39.0 14 38.81645321705061 41.0 38.0 41.0 35.0 41.0 15 38.844658494469904 41.0 38.0 41.0 35.0 41.0 16 38.89817013146358 41.0 38.0 41.0 35.0 41.0 17 38.84670162516425 41.0 38.0 41.0 35.0 41.0 18 38.83116150855225 41.0 38.0 41.0 35.0 41.0 19 38.81877851299403 40.0 38.0 41.0 35.0 41.0 20 38.76346238766571 40.0 38.0 41.0 35.0 41.0 21 38.719989378458905 40.0 38.0 41.0 35.0 41.0 22 38.80553679615786 41.0 38.0 41.0 35.0 41.0 23 38.792172824014465 41.0 38.0 41.0 35.0 41.0 24 38.75019768683178 41.0 38.0 41.0 35.0 41.0 25 38.664828272860156 40.0 37.0 41.0 35.0 41.0 26 38.541983695054185 40.0 37.0 41.0 35.0 41.0 27 38.46279746550078 40.0 37.0 41.0 35.0 41.0 28 38.41966774919666 40.0 37.0 41.0 35.0 41.0 29 38.403352533936854 40.0 37.0 41.0 35.0 41.0 30 38.353632278530846 40.0 36.0 41.0 35.0 41.0 31 38.297911243624995 40.0 36.0 41.0 34.0 41.0 32 38.23626131533996 40.0 36.0 41.0 34.0 41.0 33 38.176131754055575 40.0 36.0 41.0 34.0 41.0 34 38.06167535738894 40.0 36.0 41.0 34.0 41.0 35 37.93246470122514 40.0 35.0 41.0 34.0 41.0 36 37.902022151683624 40.0 35.0 41.0 34.0 41.0 37 37.82534704614062 40.0 35.0 41.0 34.0 41.0 38 37.73313622517667 40.0 35.0 41.0 34.0 41.0 39 37.67374704203284 40.0 35.0 41.0 33.0 41.0 40 37.52983494066461 40.0 35.0 41.0 33.0 41.0 41 37.40055533250754 39.0 35.0 41.0 33.0 41.0 42 37.324522800859306 39.0 35.0 41.0 33.0 41.0 43 37.239993525358926 39.0 35.0 41.0 33.0 41.0 44 37.14095498999707 39.0 35.0 41.0 33.0 41.0 45 37.0677289511815 39.0 35.0 41.0 33.0 41.0 46 37.039339312758905 39.0 35.0 41.0 33.0 41.0 47 36.99887084998247 39.0 35.0 41.0 33.0 41.0 48 36.898371608209885 39.0 35.0 41.0 33.0 41.0 49 36.840396185438806 39.0 35.0 41.0 33.0 41.0 50 36.74515343285567 38.0 35.0 41.0 33.0 41.0 51 36.63273332058618 38.0 35.0 40.0 32.0 41.0 52 36.27942281802395 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 9.0 10 5.0 11 5.0 12 13.0 13 12.0 14 26.0 15 45.0 16 80.0 17 164.0 18 324.0 19 570.0 20 960.0 21 1582.0 22 2364.0 23 3320.0 24 4497.0 25 6040.0 26 7771.0 27 9548.0 28 11914.0 29 15392.0 30 19857.0 31 25621.0 32 33645.0 33 47679.0 34 107311.0 35 214461.0 36 120324.0 37 170128.0 38 303218.0 39 936387.0 40 1627.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.327434922277412 13.695675242957972 46.19910694943179 11.777782885332835 2 26.22273645521226 12.858715409694652 48.37701189446335 12.54153624062974 3 26.296187443793123 13.551169469817854 45.36297845225759 14.789664634131434 4 23.836459564546157 14.018429254032347 47.31730289143582 14.827808289985677 5 23.47932736108007 16.905366078846846 43.82026318144497 15.79504337862811 6 25.049916841940025 19.37017977887438 43.41652725486466 12.163376124320934 7 86.05702672158702 2.9268409570927885 6.513371551972442 4.502760769347757 8 87.60712621295603 2.8461524543241947 6.4946420389055515 3.052079293814224 9 80.0721893138103 4.534596051349185 8.464321744671258 6.928892890169255 10 42.12614693816473 24.40827208749959 14.370524538840757 19.09505643549492 11 33.360343605876274 22.65219685451765 24.930497857842507 19.056961681763568 12 30.381470790028466 22.793181674809684 26.396338991471957 20.42900854368989 13 23.20190561792478 25.899395618663203 32.20087427215303 18.69782449125899 14 18.65479062311574 32.95406476890568 28.436339949953567 19.95480465802501 15 18.357270107452635 24.091875352400923 36.777037127958764 20.773817412187682 16 21.011530631556248 21.931624073732664 34.888486044067655 22.16835925064343 17 20.906342165219733 22.12840621624225 28.342105559144425 28.623146059393584 18 22.232518835875183 23.349638931175644 30.252662598336055 24.165179634613118 19 24.945217396832415 26.03646826912403 26.969031752637413 22.04928258140614 20 27.712930846040955 21.80658134550279 25.901058290841462 24.57942951761479 21 25.206501439433985 25.872646157442343 27.141167225210417 21.779685177913258 22 27.812495568245115 22.297607561441847 24.07358595844004 25.816310911872996 23 26.579379637449442 24.972602585650847 23.017593516752154 25.430424260147554 24 26.840565875805233 20.27482015021754 29.557029900225 23.327584073752224 25 28.400250183260706 23.410864389033993 23.815822868686553 24.37306255901875 26 23.187577295917993 27.486807429797334 23.750734143119885 25.574881131164783 27 21.421134812883363 25.858904660910238 24.092022058769594 28.62793846743681 28 21.781152241599962 26.23447296470587 27.952746856693793 24.031627937000373 29 21.732201216587015 23.483826356385958 26.28430422793084 28.499668199096188 30 22.154960068971555 25.291444426894017 27.37086049642501 25.182735007709418 31 23.151389724979353 27.380836529494584 24.6133186887776 24.854455056748467 32 26.03583254152646 23.594149545625925 23.155546405425007 27.214471507422612 33 24.715524125617815 25.063805044840805 24.951183455825003 25.26948737371638 34 23.149091325203518 23.07945470220808 26.83572456563912 26.93572940694928 35 21.571606645016068 23.6164000115409 27.17109532441913 27.6408980190239 36 23.810883754274656 26.132169723619874 22.42543771067646 27.63150881142901 37 26.245378138110354 27.144443667444047 24.57898939850878 22.03118879593682 38 22.38108348521518 24.189288381197915 29.469152785391568 23.960475348195338 39 22.386316012364414 26.092412297710254 25.24567203986892 26.275599650056407 40 25.06224017690832 22.676012188365107 27.831322885557785 24.430424749168786 41 22.513803846738792 23.439814445784908 26.953823192418607 27.092558515057696 42 22.111828396582524 26.01025673125496 23.808438648130153 28.069476224032364 43 21.673909886102066 22.955536722804673 26.787311463977964 28.5832419271153 44 26.19740515555521 23.03060148144091 24.45081693441394 26.321176428589943 45 21.38636540350853 23.95803024205084 26.357999727126153 28.297604627314477 46 21.122147233533557 25.910349694190575 24.38968928080137 28.577813791474497 47 22.327682367019236 24.250269328441817 28.331347092108615 25.090701212430332 48 20.899593672260906 21.042779088082995 31.733712292184318 26.32391494747178 49 20.835972010380942 22.006493223877342 27.6507762478477 29.50675851789402 50 20.386072479792418 22.343771165450065 30.807799497383982 26.462356857373535 51 22.02375567325753 23.105079414602468 27.833719089579397 27.037445822560603 52 21.5557134550768 22.246211430284397 27.95753926473702 28.240535849901782 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 195.0 1 175.0 2 155.0 3 144.0 4 133.0 5 290.0 6 447.0 7 478.0 8 509.0 9 596.5 10 684.0 11 1096.5 12 1509.0 13 1375.0 14 1593.0 15 1945.0 16 2082.5 17 2220.0 18 2523.0 19 2826.0 20 2839.5 21 2853.0 22 3275.0 23 3697.0 24 4410.0 25 5123.0 26 7112.0 27 9101.0 28 13200.5 29 17300.0 30 20112.0 31 22924.0 32 28594.0 33 34264.0 34 40101.5 35 45939.0 36 47706.5 37 49474.0 38 52233.5 39 70989.0 40 86985.0 41 97586.5 42 108188.0 43 112049.5 44 115911.0 45 124112.0 46 132313.0 47 146018.0 48 159723.0 49 180088.0 50 200453.0 51 204495.5 52 208538.0 53 181086.5 54 153635.0 55 137316.0 56 120997.0 57 116956.0 58 112915.0 59 107175.5 60 101436.0 61 95636.0 62 89836.0 63 75849.0 64 52858.5 65 43855.0 66 37771.5 67 31688.0 68 25520.0 69 19352.0 70 17646.5 71 15941.0 72 13163.5 73 10386.0 74 8594.0 75 6802.0 76 5170.5 77 3539.0 78 2506.0 79 1473.0 80 1096.0 81 719.0 82 551.5 83 384.0 84 316.5 85 249.0 86 154.5 87 60.0 88 49.0 89 37.5 90 37.0 91 38.0 92 39.0 93 21.0 94 3.0 95 6.5 96 10.0 97 6.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2044901.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.04165460278658 #Duplication Level Percentage of deduplicated Percentage of total 1 67.93844369247478 10.898450479655446 2 12.503549280654273 4.011552377383528 3 5.388925862229241 2.5934186208571597 4 3.012500808968214 1.9330198987233296 5 1.8772785569641948 1.505732710201861 6 1.2674373104395649 1.2199074938853771 7 0.8740913728602905 0.9815310326290223 8 0.6240659479164892 0.8008840308669534 9 0.4767376729774283 0.6882894977436111 >10 3.136315481148348 10.375155201196007 >50 1.0944161521226454 13.117976434034103 >100 1.7916050481922023 47.83816425161234 >500 0.008535807613867888 0.9178120234547018 >1k 0.004572754078857798 1.6149735860277108 >5k 0.001524251359619266 1.5031323617288561 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCTT 6946 0.3396741455943344 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCT 6361 0.3110664037036512 No Hit TGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 6112 0.29888977510402703 No Hit GTCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 6055 0.2961023540992938 No Hit GCCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 5263 0.2573718727703689 No Hit TTCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 4922 0.24069624886485946 No Hit ATCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 4299 0.2102302263043541 No Hit GGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 4072 0.1991294444083112 No Hit AGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 3633 0.17766141245957628 No Hit ACCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 2881 0.1408870160462536 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.36094656905150907 0.0 2 0.0 0.0 0.0 0.8614597968312402 0.0 3 0.0 0.0 0.0 3.1819144300873243 0.0 4 4.890212289005678E-5 0.0 0.0 3.665360816978426 0.0 5 4.890212289005678E-5 0.0 0.0 4.472392551033033 0.0 6 4.890212289005678E-5 0.0 0.0 6.979066468254453 0.0 7 4.890212289005678E-5 0.0 0.0 7.285242659669099 0.0 8 4.890212289005678E-5 0.0 0.0 7.88062600585554 0.0 9 4.890212289005678E-5 0.0 0.0 8.266463755458089 0.0 10 9.780424578011356E-5 0.0 0.0 9.633864915709855 0.0 11 9.780424578011356E-5 0.0 0.0 10.759934099499194 0.0 12 9.780424578011356E-5 0.0 0.0 11.21296336595268 0.0 13 1.4670636867017035E-4 0.0 0.0 11.444319309345538 0.0 14 1.4670636867017035E-4 0.0 0.0 11.568530701486281 0.0 15 1.4670636867017035E-4 0.0 0.0 11.779592263879767 0.0 16 1.4670636867017035E-4 0.0 0.0 12.267879960936984 0.0 17 1.4670636867017035E-4 0.0 0.0 12.949037630672585 0.0 18 1.4670636867017035E-4 0.0 0.0 13.684085439833028 0.0 19 1.4670636867017035E-4 0.0 0.0 14.128605736903644 0.0 20 1.4670636867017035E-4 0.0 0.0 14.617773672172882 0.0 21 1.4670636867017035E-4 0.0 0.0 15.378837410710837 0.0 22 1.4670636867017035E-4 0.0 0.0 16.032805500119565 0.0 23 1.4670636867017035E-4 0.0 0.0 16.727166743035482 0.0 24 1.9560849156022712E-4 0.0 0.0 17.2774134297944 0.0 25 2.445106144502839E-4 0.0 0.0 17.753524498251995 0.0 26 2.445106144502839E-4 0.0 0.0 18.18122246504843 0.0 27 2.445106144502839E-4 0.0 0.0 18.56847837621479 0.0 28 2.445106144502839E-4 0.0 0.0 18.960477793301486 0.0 29 2.445106144502839E-4 0.0 0.0 19.391745615068896 0.0 30 2.445106144502839E-4 0.0 0.0 19.847904617387346 0.0 31 2.445106144502839E-4 0.0 0.0 20.29932011378546 0.0 32 2.445106144502839E-4 0.0 0.0 20.732054999239573 0.0 33 2.445106144502839E-4 0.0 0.0 21.150852779670018 0.0 34 2.445106144502839E-4 0.0 0.0 21.56524936904036 0.0 35 2.445106144502839E-4 0.0 0.0 22.06693624776945 0.0 36 2.445106144502839E-4 0.0 0.0 22.51468408495081 0.0 37 2.445106144502839E-4 0.0 0.0 22.948201404371165 0.0 38 2.445106144502839E-4 0.0 0.0 23.379909345244588 0.0 39 2.934127373403407E-4 0.0 0.0 23.84946752923491 0.0 40 3.4231486023039747E-4 0.0 0.0 24.283571674129945 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATA 30 1.8621195E-6 46.0 40 ACACGTT 20 6.3126144E-4 46.0 45 CTCCGAT 20 6.3126144E-4 46.0 41 TCCGATT 45 3.110472E-10 46.0 24 TCCGATG 25 3.4180972E-5 46.0 19 ACGTTAC 40 5.6152203E-9 46.0 13 GACCGTA 30 1.8621195E-6 46.0 38 GCTATCG 20 6.3126144E-4 46.0 30 CCAATCG 30 1.8621195E-6 46.0 21 CGATTCG 20 6.3126144E-4 46.0 16 TCTAGCG 65 0.0 46.0 1 CTGCGTA 20 6.3126144E-4 46.0 1 CGTTACA 45 3.110472E-10 46.0 37 CGTAGCG 25 3.4180972E-5 46.0 1 CTACGAT 20 6.3126144E-4 46.0 27 CACTACG 45 3.110472E-10 46.0 18 TACGAAC 20 6.3126144E-4 46.0 34 GTCGTTA 20 6.3126144E-4 46.0 35 GTCGTAA 20 6.3126144E-4 46.0 31 CAAATCG 20 6.3126144E-4 46.0 23 >>END_MODULE