##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545616_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3086298 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.850290218248528 31.0 31.0 34.0 31.0 34.0 2 32.50422739476227 33.0 31.0 34.0 31.0 34.0 3 32.498081844332596 34.0 31.0 34.0 31.0 34.0 4 35.985788151371 37.0 35.0 37.0 35.0 37.0 5 35.76181950025565 37.0 35.0 37.0 35.0 37.0 6 35.7640759252671 37.0 35.0 37.0 35.0 37.0 7 35.74811732373219 37.0 35.0 37.0 33.0 37.0 8 35.713786549451804 37.0 35.0 37.0 33.0 37.0 9 37.87707343879301 39.0 38.0 39.0 35.0 39.0 10 37.78778880069261 39.0 38.0 39.0 35.0 39.0 11 37.61338503281277 39.0 37.0 39.0 35.0 39.0 12 37.156108386163616 39.0 37.0 39.0 33.0 39.0 13 36.923920178803215 39.0 37.0 39.0 33.0 39.0 14 37.75679308997381 40.0 36.0 41.0 33.0 41.0 15 37.72586250582413 40.0 36.0 41.0 33.0 41.0 16 37.62672010285462 40.0 36.0 41.0 32.0 41.0 17 37.73681024969073 40.0 36.0 41.0 32.0 41.0 18 37.7767370487231 40.0 36.0 41.0 33.0 41.0 19 37.74623383743242 40.0 36.0 41.0 33.0 41.0 20 37.705660308887865 40.0 36.0 41.0 33.0 41.0 21 37.688419264763155 40.0 36.0 41.0 33.0 41.0 22 37.61268322112771 40.0 35.0 41.0 32.0 41.0 23 37.562348483522975 40.0 35.0 41.0 32.0 41.0 24 37.544668078066344 40.0 35.0 41.0 32.0 41.0 25 37.471277562957304 40.0 35.0 41.0 32.0 41.0 26 37.37884805679815 40.0 35.0 41.0 32.0 41.0 27 37.263799542364346 39.0 35.0 41.0 32.0 41.0 28 37.17177051600331 39.0 35.0 41.0 31.0 41.0 29 37.12039569736947 39.0 35.0 41.0 31.0 41.0 30 37.05742089713955 39.0 35.0 41.0 31.0 41.0 31 36.941666358854526 39.0 35.0 41.0 31.0 41.0 32 36.83873851455692 39.0 35.0 41.0 31.0 41.0 33 36.726092878911885 39.0 35.0 41.0 30.0 41.0 34 36.65224096960177 39.0 35.0 41.0 30.0 41.0 35 36.60589158921141 39.0 35.0 41.0 30.0 41.0 36 36.484354394812165 39.0 35.0 41.0 30.0 41.0 37 36.35810864666989 39.0 35.0 41.0 30.0 41.0 38 36.27211759849502 39.0 35.0 41.0 30.0 41.0 39 36.20824981903886 38.0 35.0 41.0 30.0 41.0 40 36.129597984381284 38.0 35.0 41.0 30.0 41.0 41 36.04940222881912 38.0 35.0 40.0 29.0 41.0 42 35.92200623530197 38.0 35.0 40.0 29.0 41.0 43 35.790301519814356 38.0 35.0 40.0 29.0 41.0 44 35.72010803882191 38.0 35.0 40.0 29.0 41.0 45 35.696457049837704 38.0 35.0 40.0 29.0 41.0 46 35.622061771092746 38.0 34.0 40.0 29.0 41.0 47 35.55922338024391 38.0 34.0 40.0 29.0 41.0 48 35.48817871767405 37.0 34.0 40.0 28.0 41.0 49 35.44557265695017 37.0 34.0 40.0 28.0 41.0 50 35.35977698848264 37.0 34.0 40.0 28.0 41.0 51 35.15081596138805 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 22.0 10 40.0 11 56.0 12 50.0 13 70.0 14 80.0 15 116.0 16 258.0 17 493.0 18 1013.0 19 1874.0 20 3184.0 21 5326.0 22 8163.0 23 11414.0 24 16359.0 25 22676.0 26 29535.0 27 36217.0 28 42840.0 29 50897.0 30 61512.0 31 75846.0 32 94461.0 33 122366.0 34 195027.0 35 297172.0 36 233362.0 37 320487.0 38 493476.0 39 961474.0 40 425.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.3823039771272896 90.36450789910761 3.6694123509784218 3.5837757727866846 2 3.6097615978755133 3.0954561095526096 90.05407125300279 3.2407110395690895 3 29.25190632920087 15.818563210681535 41.4844580789023 13.445072381215295 4 28.09731918304713 16.028069875300442 41.95978482959195 13.914826112060469 5 25.40457855981503 14.103984773991366 45.24776933400469 15.24366733218892 6 23.773303809288667 14.85452798141981 46.069724958510164 15.302443250781355 7 23.699266888680228 17.224487071566 42.991149914881845 16.085096124871935 8 26.817501096783264 19.203038721471486 42.66966443292255 11.3097957488227 9 81.72052731136138 4.254320224424212 9.341418100261219 4.683734363953189 10 81.60790046845769 4.663580768934173 9.583034431542256 4.145484331065892 11 74.82540571260455 7.657134858655905 10.584622742197935 6.93283668654161 12 40.32825086884028 24.64923996321807 17.049844182253302 17.972664985688354 13 32.02480771461473 24.254592395160802 25.58304479995127 18.137555090273203 14 27.09100028577927 23.854695820040707 28.792715415037694 20.261588479142326 15 23.77113292365157 24.27267230837722 32.74826345349671 19.207931314474493 16 19.859002597934484 29.326072854921982 31.49699089329676 19.31793365384678 17 20.0587888791037 23.789018429198993 35.88658645406244 20.265606237634863 18 24.353189484618788 22.781597888473502 32.338549291092434 20.52666333581527 19 24.383646686094472 22.446665876075482 29.278151364515026 23.89153607331502 20 24.493811031857586 22.889040526870705 30.78610685034303 21.831041590928677 21 25.819217716500482 24.84287000153582 28.08393745516473 21.25397482679897 22 25.535414921047806 24.436298763113605 27.705911742806432 22.322374573032157 23 26.440998244498747 24.457165186252265 29.055748991186203 20.046087578062778 24 28.396026566455994 20.97286133743404 27.626269401075334 23.004842695034633 25 27.44261895643259 23.928279122754834 25.96768037305536 22.661421547757215 26 26.242281205508995 22.927274035106137 28.1985731773147 22.631871582070172 27 27.34178617878118 23.980283174210655 25.888102833880588 22.789827813127573 28 23.260618384874046 25.95173894419787 26.290688715088432 24.49695395583965 29 22.31090452056153 24.471616156314134 28.46951266533562 24.747966657788716 30 22.71919302672652 24.84163875296553 29.305530444564976 23.133637775742976 31 22.598692673228573 24.768962686040037 28.837267172515425 23.79507746821597 32 23.68096016651665 24.467663200377928 28.625946036319238 23.225430596786182 33 24.701730033846374 26.228121846950618 27.49050804556138 21.579640073641627 34 25.169442484167114 25.379305562845843 26.62717598883841 22.824075964148633 35 25.045053977289296 24.815264112538713 25.3785927347262 24.761089175445793 36 22.738180175731575 26.17527536226249 27.858780973191834 23.22776348881411 37 22.55987594198616 25.52893466541468 29.240922295902728 22.67026709669643 38 24.836551752293527 27.195040789969084 24.86402803617797 23.104379421559422 39 23.768281611173 27.983720301798463 25.809950950945115 22.438047136083426 40 23.345185720886317 26.125020979827614 27.512929730051994 23.01686356923408 41 22.711449121244932 26.875272575752568 25.608155790529626 24.80512251247287 42 24.548471988122987 24.26719649236723 27.539142364087976 23.645189155421804 43 22.276591566984134 24.95186790128497 28.105225094919543 24.666315436811352 44 21.191083945879498 26.132343668693043 27.13273313205659 25.543839253370866 45 21.66433701476656 23.844003398246056 28.088797646889574 26.40286194009781 46 23.744628678112097 24.12135833934377 27.409245639922002 24.72476734262213 47 21.175110115743845 25.553462432986056 27.361064939289726 25.910362511980374 48 21.4348063602413 25.8847979035077 27.35017810982608 25.33021762642493 49 22.43503381721402 25.848443669405867 28.979930000278653 22.736592513101456 50 21.53256101646698 25.31835875861631 29.86652617472454 23.28255405019217 51 22.08824293700738 25.386271837651453 27.567299074813906 24.95818615052727 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 682.0 1 1953.0 2 3224.0 3 7809.0 4 12394.0 5 8696.5 6 4999.0 7 5208.0 8 5417.0 9 5714.5 10 6012.0 11 6280.0 12 6548.0 13 7309.0 14 8070.0 15 7669.5 16 7269.0 17 8220.5 18 9172.0 19 9231.0 20 9290.0 21 10735.5 22 12181.0 23 15516.5 24 18852.0 25 19495.5 26 25949.0 27 31759.0 28 38348.0 29 44937.0 30 55011.5 31 65086.0 32 73922.5 33 82759.0 34 91278.0 35 99797.0 36 108762.5 37 117728.0 38 129876.0 39 142024.0 40 157892.0 41 173760.0 42 204866.0 43 235972.0 44 251460.0 45 266948.0 46 265306.5 47 263665.0 48 244602.5 49 225540.0 50 213478.0 51 201416.0 52 192075.0 53 182734.0 54 179442.0 55 176150.0 56 170434.0 57 164718.0 58 151534.5 59 138351.0 60 123951.0 61 109551.0 62 94070.0 63 78589.0 64 68112.5 65 57636.0 66 47283.0 67 36930.0 68 31706.5 69 26483.0 70 21805.5 71 17128.0 72 13490.0 73 9852.0 74 8133.0 75 4869.0 76 3324.0 77 2472.5 78 1621.0 79 1120.5 80 620.0 81 478.0 82 336.0 83 227.0 84 118.0 85 94.0 86 70.0 87 44.5 88 19.0 89 14.0 90 9.0 91 6.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3086298.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.23860191107383 #Duplication Level Percentage of deduplicated Percentage of total 1 73.4579515196255 11.92854431930159 2 10.233603718625409 3.323588338048856 3 3.9330207896264118 1.9160027673216162 4 2.1256233947432963 1.3806860848040692 5 1.325780475841486 1.076441068433196 6 0.9566314973248554 0.9320614836391689 7 0.6985991018526548 0.7940990897293286 8 0.5325441999704114 0.6918218610696643 9 0.406745657392902 0.5944482728515224 >10 3.223625737118127 11.603767149444923 >50 1.3334548547343936 15.954882132764759 >100 1.7603563198623426 46.87620208244444 >500 0.007639731078766696 0.8729804400906266 >1k 0.004020911094087735 1.5588283490443995 >5k 4.020911094087735E-4 0.4956465610118135 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 8338 0.2701618573449486 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6844 0.22175434776551067 No Hit ATGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCT 4649 0.1506335421919724 No Hit ATCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTG 3809 0.12341646853285068 No Hit GGGACTGTCTAGGGCACTCAGTGCCTCAAGTGGCAGGCAGCATAGAGAACA 3583 0.11609377966742034 No Hit ATGCCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC 3345 0.1083822754640025 No Hit ATTGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC 3176 0.10290645945401254 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0853125654100803 0.0 2 0.0 0.0 0.0 0.46165341130376913 0.0 3 0.0 0.0 0.0 0.6433273779784064 0.0 4 3.2401278165621075E-5 0.0 0.0 0.9124523944220552 0.0 5 3.2401278165621075E-5 0.0 0.0 1.9082732775642532 0.0 6 3.2401278165621075E-5 0.0 0.0 2.1451266209549433 0.0 7 3.2401278165621075E-5 0.0 0.0 2.530475022178675 0.0 8 6.480255633124215E-5 0.0 0.0 3.720314758976612 0.0 9 6.480255633124215E-5 0.0 0.0 3.865245676211435 0.0 10 6.480255633124215E-5 0.0 0.0 4.124715111761729 0.0 11 9.720383449686324E-5 0.0 0.0 4.334675394274953 0.0 12 9.720383449686324E-5 0.0 0.0 4.981048492400928 0.0 13 1.296051126624843E-4 0.0 0.0 5.525519570696025 0.0 14 1.296051126624843E-4 0.0 0.0 5.747597931243192 0.0 15 1.296051126624843E-4 0.0 0.0 5.869685947371252 0.0 16 1.9440766899372647E-4 0.0 0.0 5.983706045236072 0.0 17 2.592102253249686E-4 0.0 0.0 6.117912139398075 0.0 18 2.592102253249686E-4 0.0 0.0 6.394845863879638 0.0 19 2.592102253249686E-4 0.0 0.0 6.736193329354457 0.0 20 3.240127816562108E-4 0.0 0.0 7.102813791798459 0.0 21 3.5641405982183183E-4 0.0 0.0 7.359075500810356 0.0 22 3.8881533798745295E-4 0.0 0.0 7.650946214526271 0.0 23 3.8881533798745295E-4 0.0 0.0 8.080230748942585 0.0 24 3.8881533798745295E-4 0.0 0.0 8.466194774451463 0.0 25 3.8881533798745295E-4 0.0 0.0 8.855917348227553 0.0 26 3.8881533798745295E-4 0.0 0.0 9.16337307674113 0.0 27 0.001296051126624843 0.0 0.0 9.437876705360273 0.0 28 0.001296051126624843 0.0 0.0 9.697410943466897 0.0 29 0.0013608536829560853 0.0 0.0 9.95947248127044 0.0 30 0.0014256562392873273 0.0 0.0 10.219719547496709 0.0 31 0.0014580575174529486 0.0 0.0 10.525296001876683 0.0 32 0.0014904587956185696 0.0 0.0 10.86537981750304 0.0 33 0.0015228600737841906 0.0 0.0 11.166031277601839 0.0 34 0.0015228600737841906 0.0 0.0 11.453949035381548 0.0 35 0.001652465186446675 0.0 0.0 11.759039470589036 0.0 36 0.001717267742777917 0.0 0.0 12.087296819684942 0.0 37 0.0017496690209435383 0.0 0.0 12.460721550543726 0.0 38 0.0017496690209435383 0.0 0.0 12.766524813870857 0.0 39 0.0018792741336060225 0.0 0.0 13.096499430709542 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCATA 45 3.8562575E-10 45.000004 2 ACGGGTA 110 0.0 45.0 7 CGTTACG 65 0.0 44.999996 3 TACGCTA 30 2.1666965E-6 44.999996 2 TACACCG 30 2.1666965E-6 44.999996 3 GCGTTAG 135 0.0 40.0 3 TAGTACG 85 0.0 39.705883 3 ATCTCGA 195 0.0 39.23077 1 ATCGTAC 155 0.0 39.193546 1 ATTCGAT 115 0.0 39.130436 1 ATCGTTC 215 0.0 38.720932 1 TAACGGC 35 6.251714E-6 38.571426 16 CGAATGT 35 6.251714E-6 38.571426 34 TAGTCGT 35 6.251714E-6 38.571426 2 ATCGTTA 375 0.0 37.8 1 AACACGT 800 0.0 37.6875 43 CATATCG 30 1.1403678E-4 37.499996 36 ATTAGTT 1605 0.0 37.28972 1 TAGCGTA 85 0.0 37.058823 2 TACGGGT 255 0.0 37.058823 6 >>END_MODULE