##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545615_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2464192 Sequences flagged as poor quality 0 Sequence length 52 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.529776494688726 33.0 31.0 34.0 31.0 34.0 2 32.945083013011974 34.0 31.0 34.0 31.0 34.0 3 33.0325749779238 34.0 33.0 34.0 31.0 34.0 4 36.40898355322962 37.0 37.0 37.0 35.0 37.0 5 36.38999923707244 37.0 37.0 37.0 35.0 37.0 6 36.39787200023375 37.0 37.0 37.0 35.0 37.0 7 36.46986273796847 37.0 37.0 37.0 35.0 37.0 8 36.49355975508402 37.0 37.0 37.0 35.0 37.0 9 38.28642573305976 39.0 39.0 39.0 37.0 39.0 10 38.04599114030076 39.0 39.0 39.0 35.0 39.0 11 37.8854845726307 39.0 38.0 39.0 35.0 39.0 12 37.58020722411241 39.0 37.0 39.0 35.0 39.0 13 37.519404332129966 39.0 37.0 39.0 35.0 39.0 14 38.71874715931226 41.0 38.0 41.0 35.0 41.0 15 38.83003394216035 41.0 38.0 41.0 35.0 41.0 16 38.90910692023998 41.0 38.0 41.0 35.0 41.0 17 38.86849076695322 41.0 38.0 41.0 35.0 41.0 18 38.85515941939589 41.0 38.0 41.0 35.0 41.0 19 38.82698344934161 40.0 38.0 41.0 35.0 41.0 20 38.72438470703582 40.0 38.0 41.0 35.0 41.0 21 38.698533636989325 40.0 38.0 41.0 35.0 41.0 22 38.81693390774745 40.0 38.0 41.0 35.0 41.0 23 38.81362572396956 40.0 38.0 41.0 35.0 41.0 24 38.77156284899878 41.0 38.0 41.0 35.0 41.0 25 38.67168873204685 40.0 38.0 41.0 35.0 41.0 26 38.56402666675324 40.0 37.0 41.0 35.0 41.0 27 38.486893066774016 40.0 37.0 41.0 35.0 41.0 28 38.44120912656157 40.0 37.0 41.0 35.0 41.0 29 38.364476469366025 40.0 37.0 41.0 34.0 41.0 30 38.318563245071815 40.0 37.0 41.0 34.0 41.0 31 38.24584975521388 40.0 37.0 41.0 34.0 41.0 32 38.17809001895956 40.0 36.0 41.0 34.0 41.0 33 38.161553564008 40.0 36.0 41.0 34.0 41.0 34 38.028768050541515 40.0 36.0 41.0 34.0 41.0 35 37.9541131535205 40.0 36.0 41.0 34.0 41.0 36 37.86155908305847 40.0 35.0 41.0 34.0 41.0 37 37.76421561306911 40.0 35.0 41.0 33.0 41.0 38 37.698112809391475 40.0 35.0 41.0 33.0 41.0 39 37.593234212269174 40.0 35.0 41.0 33.0 41.0 40 37.45359898903982 40.0 35.0 41.0 33.0 41.0 41 37.29631294964029 39.0 35.0 41.0 33.0 41.0 42 37.226155267122046 39.0 35.0 41.0 33.0 41.0 43 37.14731563124951 39.0 35.0 41.0 33.0 41.0 44 37.025451344700414 39.0 35.0 41.0 33.0 41.0 45 36.98628678284809 39.0 35.0 41.0 33.0 41.0 46 36.965052236189386 39.0 35.0 41.0 33.0 41.0 47 36.93099969482898 39.0 35.0 41.0 33.0 41.0 48 36.84190436459497 39.0 35.0 41.0 33.0 41.0 49 36.76017940160507 39.0 35.0 41.0 32.0 41.0 50 36.66267928797756 38.0 35.0 41.0 32.0 41.0 51 36.55279621068488 38.0 35.0 40.0 32.0 41.0 52 36.20978073137158 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 5.0 10 7.0 11 5.0 12 16.0 13 34.0 14 45.0 15 63.0 16 120.0 17 234.0 18 504.0 19 835.0 20 1362.0 21 2242.0 22 3216.0 23 4450.0 24 5910.0 25 7611.0 26 9342.0 27 11883.0 28 15121.0 29 19341.0 30 24984.0 31 32211.0 32 42520.0 33 61569.0 34 142439.0 35 214420.0 36 148268.0 37 220736.0 38 384399.0 39 1108735.0 40 1561.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.575330169077734 13.468633937615252 45.84845661377035 12.10757927953666 2 26.69824429265252 12.988030153494535 48.169501402488116 12.144224151364828 3 26.717155156741036 13.78098784510298 44.36995980832663 15.131897189829363 4 24.279195776952445 14.416246785964729 46.07047665117004 15.234080785912784 5 23.951299249409136 16.612382476690126 43.39276322624211 16.043555047658625 6 26.36357069578994 18.719442316183155 43.520513011973094 11.396473976053814 7 86.78491773368309 2.6299087084123314 6.521691491572085 4.063482066332494 8 87.11342298002754 2.910162844453679 6.848411162766538 3.1280030127522527 9 79.49875659039556 5.189693010934213 8.575386982832507 6.736163415837727 10 42.385293029114614 23.87565579305509 14.926596628834115 18.812454548996183 11 33.304628860088826 23.14831798820871 25.26767394748461 18.279379204217854 12 28.134780082071526 23.59532049450692 27.477404358101964 20.792495065319585 13 24.689147598888397 22.94354498350778 33.29566040308548 19.07164701451835 14 19.762705178817235 29.58040607225411 31.460900773965665 19.19598797496299 15 19.942114900137653 23.321884009038257 35.62413156117705 21.11186952964704 16 24.667883022102174 23.007095226346 31.1975690205958 21.12745273095603 17 24.91116763628808 22.69007447471626 27.652918279095136 24.74583960990053 18 24.97824844817287 22.66568514141755 29.33549820793185 23.02056820247773 19 26.244342973274808 25.06387489286549 27.09975521387944 21.592026919980263 20 25.92095096485988 23.918590759161624 26.159203503623097 24.001254772355402 21 26.35995896423655 24.919933187024387 28.62828870477625 20.09181914396281 22 28.817519089421605 20.50558560371919 26.995014998831262 23.681880308027946 23 27.78687699659767 23.64101498584526 24.80147650832403 23.77063150923305 24 26.855253162091262 22.15789191751292 27.11306586499753 23.87378905539828 25 29.337405526842065 23.6136226397943 23.547799846765187 23.501171986598447 26 23.440705919019297 25.394571526894012 25.277210542035682 25.887512012051012 27 22.82395202971197 22.904384073968263 27.17219275121419 27.099471145105575 28 23.134601524556526 23.501537217879125 28.665542295405555 24.698318962158794 29 23.003361751032386 24.65668259616134 27.041074721450276 25.298880931356 30 23.96164746902839 23.9851440147521 27.19012966522089 24.863078850998622 31 24.18066449367582 26.37363484663533 26.547525517492144 22.89817514219671 32 25.565175116224708 25.39558605822923 25.213579136690644 23.825659688855414 33 25.26040990312443 23.951339830662548 24.093090148819574 26.695160117393453 34 21.8349868841389 26.65185992000623 27.123860478404282 24.38929271745059 35 22.13719547827442 24.65246214580682 29.46767135028439 23.742671025634365 36 24.48352238786588 26.223484209022672 24.272946263927487 25.02004713918396 37 24.063749902604993 28.11051249253305 24.628803275069476 23.196934329792484 38 22.894401085629692 25.39647884580422 27.899530556060565 23.809589512505518 39 22.78897098927356 26.472084967405134 24.927643625172063 25.811300418149237 40 25.33572870945121 23.02783224683791 27.479758070799676 24.1566809729112 41 22.741125691504557 24.006570916551954 27.721744084876505 25.53055930706698 42 21.09084844038127 25.708345778251047 26.30168428434148 26.899121497026208 43 21.490654948965016 22.605462561358856 28.182463054826894 27.72141943484923 44 25.60287510064151 22.61179323689063 25.90759973248838 25.87773192997948 45 21.10736501051866 23.702982559800535 26.94964515752019 28.24000727216061 46 21.304062345791237 24.83442848609199 26.870308807105943 26.99120036101083 47 22.596169454328237 24.780090187777574 29.387685699815595 23.236054658078594 48 21.019466015635146 24.16913941770771 30.89284438874893 23.918550177908216 49 22.181307300729813 23.844570552943928 26.68063202867309 27.293490117653167 50 21.025390878632834 23.734473612445782 29.584017803807495 25.65611770511389 51 22.29120133496091 24.155504116562344 27.626012908085084 25.92728164039166 52 21.601644677038152 23.329148053398434 27.743373892943406 27.32583337662 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 207.0 1 149.5 2 92.0 3 101.5 4 111.0 5 201.0 6 291.0 7 428.0 8 565.0 9 802.0 10 1039.0 11 1186.0 12 1333.0 13 1449.5 14 1937.0 15 2308.0 16 2549.0 17 2790.0 18 2989.0 19 3188.0 20 3301.0 21 3414.0 22 4989.5 23 6565.0 24 8465.0 25 10365.0 26 12191.0 27 14017.0 28 16959.5 29 19902.0 30 25245.0 31 30588.0 32 38365.0 33 46142.0 34 50681.0 35 55220.0 36 58639.0 37 62058.0 38 71639.5 39 91837.0 40 102453.0 41 114109.0 42 125765.0 43 144401.5 44 163038.0 45 188754.5 46 214471.0 47 226923.5 48 239376.0 49 221270.0 50 203164.0 51 187209.0 52 171254.0 53 162248.0 54 153242.0 55 146666.0 56 140090.0 57 133633.5 58 127177.0 59 122148.5 60 117120.0 61 107791.5 62 98463.0 63 89243.5 64 69508.5 65 58993.0 66 51760.5 67 44528.0 68 36055.5 69 27583.0 70 24502.0 71 21421.0 72 17579.0 73 13737.0 74 11236.5 75 8736.0 76 6717.5 77 4699.0 78 3702.5 79 2706.0 80 2230.5 81 1755.0 82 1248.0 83 741.0 84 517.5 85 294.0 86 264.0 87 234.0 88 145.0 89 51.5 90 47.0 91 32.0 92 17.0 93 13.5 94 10.0 95 8.0 96 6.0 97 5.5 98 5.0 99 5.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2464192.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.195443247292992 #Duplication Level Percentage of deduplicated Percentage of total 1 70.14426967815542 12.061618083735363 2 11.819858477246248 4.064954112730456 3 4.759696680510334 2.455352824321329 4 2.5223674704145633 1.734929067453264 5 1.4999300483894744 1.2895981010995319 6 0.9712139134418586 1.0020272237742485 7 0.6763905190624886 0.814158434848225 8 0.5252524160754296 0.7225558488902858 9 0.41707728547996464 0.6454645912985174 >10 3.5251402619541676 13.88965614505779 >50 1.5674929538999387 19.802012888468333 >100 1.5623178575849197 38.55050582627375 >500 0.004969505091774537 0.5853519729932867 >1k 0.002839717195299735 1.1798189158823327 >5k 0.0011832154980415564 1.2019959631733539 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGCT 6741 0.2735582292288913 No Hit CTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGCTT 6211 0.2520501649222138 Illumina Single End Adapter 2 (95% over 21bp) TGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 5793 0.23508720099732489 No Hit GTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 5758 0.233666857128016 No Hit GCCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 5036 0.20436719216684415 No Hit GGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 4619 0.187444809495364 No Hit ATCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 4166 0.16906150170116616 No Hit TTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 3982 0.1615945510739423 No Hit AGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 3735 0.15157098148196244 No Hit ACCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC 2974 0.1206886476378464 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.26475209723917614 0.0 2 0.0 0.0 0.0 0.686147832636418 0.0 3 0.0 0.0 0.0 2.523869893255071 0.0 4 0.0 0.0 0.0 2.9313462587330856 0.0 5 0.0 0.0 0.0 3.6083227280991093 0.0 6 0.0 0.0 0.0 5.738270394514713 0.0 7 0.0 0.0 0.0 5.99194380957328 0.0 8 0.0 0.0 0.0 6.459886242630445 0.0 9 0.0 0.0 0.0 6.783481157312417 0.0 10 0.0 0.0 0.0 7.94410500480482 0.0 11 0.0 0.0 0.0 8.903567579149676 0.0 12 0.0 0.0 0.0 9.298260849803912 0.0 13 0.0 0.0 0.0 9.488140534503804 0.0 14 0.0 0.0 0.0 9.617716476638185 0.0 15 0.0 0.0 0.0 9.81197893670623 0.0 16 0.0 0.0 0.0 10.253787042568112 0.0 17 0.0 0.0 0.0 10.815999727293978 0.0 18 4.0581253408825285E-5 0.0 0.0 11.422608303249097 0.0 19 8.116250681765057E-5 0.0 0.0 11.82533666207828 0.0 20 8.116250681765057E-5 0.0 0.0 12.28337726930369 0.0 21 8.116250681765057E-5 0.0 0.0 12.961490013765161 0.0 22 8.116250681765057E-5 0.0 0.0 13.569356608575955 0.0 23 1.2174376022647586E-4 0.0 0.0 14.155674557826663 0.0 24 1.6232501363530114E-4 0.0 0.0 14.614810858894112 0.0 25 0.0017044126431706621 0.0 0.0 15.030525218814118 0.0 26 0.0017044126431706621 0.0 0.0 15.407322156715061 0.0 27 0.0017449938965794873 0.0 0.0 15.79085558268187 0.0 28 0.0017449938965794873 0.0 0.0 16.16838298314417 0.0 29 0.0017449938965794873 0.0 0.0 16.58746558709711 0.0 30 0.0017449938965794873 0.0 0.0 17.040474118899827 0.0 31 0.0017449938965794873 0.0 0.0 17.443973521543775 0.0 32 0.0017449938965794873 0.0 0.0 17.84970489312521 0.0 33 0.0017449938965794873 0.0 0.0 18.277025491520142 0.0 34 0.0017449938965794873 0.0 0.0 18.710068046645716 0.0 35 0.0017449938965794873 0.0 0.0 19.199559125262965 0.0 36 0.0017449938965794873 0.0 0.0 19.60123237150352 0.0 37 0.0017449938965794873 0.0 0.0 20.010859543412202 0.0 38 0.0017449938965794873 0.0 0.0 20.480506389112538 0.0 39 0.0017449938965794873 0.0 0.0 21.287870425681117 0.0 40 0.0017449938965794873 0.0 0.0 21.738444082279305 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAA 20 6.3128665E-4 46.000004 28 TAACGAC 20 6.3128665E-4 46.000004 8 ACCGTAT 20 6.3128665E-4 46.000004 10 ACTACGC 30 1.8622777E-6 46.0 30 GCGTAAT 30 1.8622777E-6 46.0 6 CCGTCTA 35 1.0202166E-7 45.999996 30 CGGTTAG 65 0.0 42.461536 1 ACGGGTA 45 1.5896148E-8 40.888885 5 TATCGGA 45 1.5896148E-8 40.888885 13 CGATACG 45 1.5896148E-8 40.888885 1 TTTAGCG 265 0.0 40.792454 1 CGTTACG 80 0.0 40.250004 1 TAACGGC 35 5.3756175E-6 39.42857 14 ACTAACG 35 5.3756175E-6 39.42857 19 ACGACCA 635 0.0 39.118107 28 TAGTACG 95 0.0 38.736843 1 TTTGGGC 5125 0.0 38.550243 4 ACACGAC 635 0.0 38.3937 26 CAACCGT 30 1.0018991E-4 38.333332 35 CGTCCTA 30 1.0018991E-4 38.333332 33 >>END_MODULE