##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545611_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1142506 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.574191295275476 33.0 31.0 34.0 31.0 34.0 2 32.988999620133285 34.0 31.0 34.0 31.0 34.0 3 33.059781742940515 34.0 33.0 34.0 31.0 34.0 4 36.43266556149377 37.0 37.0 37.0 35.0 37.0 5 36.4115593266031 37.0 37.0 37.0 35.0 37.0 6 36.42909971588771 37.0 37.0 37.0 35.0 37.0 7 36.50523585871759 37.0 37.0 37.0 35.0 37.0 8 36.538314021983254 37.0 37.0 37.0 35.0 37.0 9 38.358364857602496 39.0 39.0 39.0 37.0 39.0 10 38.12837919450751 39.0 39.0 39.0 37.0 39.0 11 37.923047231261805 39.0 38.0 39.0 35.0 39.0 12 37.51413734369885 39.0 37.0 39.0 35.0 39.0 13 37.41511204317526 39.0 37.0 39.0 35.0 39.0 14 38.73652479724395 41.0 38.0 41.0 35.0 41.0 15 38.77304889427276 41.0 38.0 41.0 35.0 41.0 16 38.84935396400544 41.0 38.0 41.0 35.0 41.0 17 38.79587240679699 40.0 38.0 41.0 35.0 41.0 18 38.78051318767692 40.0 37.0 41.0 35.0 41.0 19 38.76836708078557 40.0 38.0 41.0 35.0 41.0 20 38.67121398049551 40.0 37.0 41.0 35.0 41.0 21 38.62595732538823 40.0 37.0 41.0 35.0 41.0 22 38.71782380136297 40.0 37.0 41.0 35.0 41.0 23 38.715640005391656 40.0 37.0 41.0 35.0 41.0 24 38.678196875990146 40.0 37.0 41.0 35.0 41.0 25 38.60833816190024 40.0 37.0 41.0 35.0 41.0 26 38.48428892277152 40.0 36.0 41.0 35.0 41.0 27 38.3894666636324 40.0 36.0 41.0 35.0 41.0 28 38.362374464554236 40.0 36.0 41.0 35.0 41.0 29 38.314681060755916 40.0 36.0 41.0 35.0 41.0 30 38.23454931527712 40.0 36.0 41.0 35.0 41.0 31 38.18308525294397 40.0 36.0 41.0 34.0 41.0 32 38.12822514717647 40.0 35.0 41.0 34.0 41.0 33 38.0368024325474 40.0 35.0 41.0 34.0 41.0 34 37.93166600437985 40.0 35.0 41.0 34.0 41.0 35 37.80570867899162 40.0 35.0 41.0 34.0 41.0 36 37.74754880937168 40.0 35.0 41.0 34.0 41.0 37 37.66379520107553 40.0 35.0 41.0 34.0 41.0 38 37.54339058175624 40.0 35.0 41.0 33.0 41.0 39 37.50002363226101 40.0 35.0 41.0 33.0 41.0 40 37.37247856904034 39.0 35.0 41.0 33.0 41.0 41 37.259194262437134 39.0 35.0 41.0 33.0 41.0 42 37.13749774618251 39.0 35.0 41.0 33.0 41.0 43 37.03850045426457 39.0 35.0 41.0 33.0 41.0 44 36.9474225955925 39.0 35.0 41.0 33.0 41.0 45 36.90816765951339 39.0 35.0 41.0 33.0 41.0 46 36.901150628530615 39.0 35.0 41.0 33.0 41.0 47 36.879568247344 38.0 35.0 41.0 33.0 41.0 48 36.76742966776542 38.0 35.0 41.0 33.0 41.0 49 36.68647779530261 38.0 35.0 40.0 33.0 41.0 50 36.58853082609632 38.0 35.0 40.0 33.0 41.0 51 36.461161691929846 38.0 35.0 40.0 32.0 41.0 52 36.095341293612464 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 3.0 12 5.0 13 10.0 14 21.0 15 25.0 16 57.0 17 99.0 18 156.0 19 277.0 20 496.0 21 787.0 22 1200.0 23 1839.0 24 2523.0 25 3270.0 26 4163.0 27 5153.0 28 6651.0 29 8319.0 30 10915.0 31 13853.0 32 18456.0 33 26214.0 34 63097.0 35 140958.0 36 67915.0 37 98368.0 38 170507.0 39 496520.0 40 646.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.78252893201436 12.877656660008787 47.690865518430535 12.648948889546313 2 25.23400314746706 12.92562139717428 49.48315369897401 12.35722175638465 3 25.059824631117912 14.069860464627757 46.1823395238187 14.687975380435638 4 23.742719950704856 13.932093135615917 47.171218356840136 15.15396855683909 5 21.73844163619272 16.724376064545833 45.61385235613643 15.923329943125026 6 24.590067798331035 19.21364089116381 44.03670527769657 12.159586032808582 7 86.88365750376803 2.4641446084309404 6.475151990449065 4.177045897351961 8 87.86483397023736 2.848300140218082 6.208370021689165 3.0784958678553984 9 80.30163517740826 4.484090236725234 8.659123015546527 6.555151570319981 10 45.95030573143599 21.73380271088292 13.705223429898835 18.61066812778226 11 35.524102280425666 21.891526171416167 23.193051064939702 19.39132048321847 12 30.36071582993875 22.341239345788992 26.840821842511108 20.45722298176115 13 22.612835293643972 26.95907067446473 30.771654590873045 19.656439441018254 14 17.8579368510975 33.6977661386461 28.073375544636093 20.370921465620313 15 17.516056808454397 22.00338554020723 39.84644281955631 20.634114831782068 16 21.943254564965088 20.460461476788744 34.81600971898616 22.780274239260013 17 21.015644556790072 20.51035180559227 27.217362534638767 31.25664110297889 18 22.541413349251556 22.082159743581215 30.82819696351704 24.54822994365019 19 26.187696169648124 24.7533929799931 27.21963823384735 21.839272616511423 20 29.41665076594784 20.33932425737808 25.029715380050522 25.214309596623565 21 25.25238379492099 25.56397953271143 26.085027124584027 23.098609547783553 22 28.92011070401381 21.50877106991123 23.493268306687227 26.07784991938773 23 27.53377225152428 24.353482607531163 21.841285735042092 26.271459405902466 24 27.179813497697168 19.25136498189069 28.93927909350148 24.62954242691067 25 28.263396428552674 21.899053484183014 25.609405989990425 24.228144097273887 26 23.707621666757113 27.232679740850372 24.050552032111867 25.009146560280648 27 22.50491463502161 24.293964320537484 27.05491262190308 26.146208422537825 28 24.671730389162068 23.794798451824324 28.330617082098474 23.202854076915134 29 24.669979851309314 22.41686258102802 27.120820372059317 25.79233719560335 30 23.522327235042965 25.66726126602399 28.346809557236462 22.463601941696588 31 27.726856576683183 24.83251729093764 22.9051751150541 24.535451017325073 32 29.41498775498772 23.704033064158963 24.89982547137608 21.981153709477237 33 29.037046632577862 26.210278107948664 22.1931438434459 22.559531416027575 34 25.545948992828045 23.535281215153354 24.884683318949747 26.03408647306885 35 25.2973726177368 22.176863841415276 29.42312775600303 23.102635784844892 36 30.302685500119914 23.243028920635865 23.21003128211143 23.244254297132795 37 28.838448113182775 26.769049790548145 23.822019315434666 20.57048278083441 38 24.54928026636184 24.537289082070465 26.840471734940564 24.072958916627133 39 23.319177317230718 26.427519855475595 25.14209991019741 25.111202917096275 40 26.766336456876378 22.62850260742613 27.412810085898894 23.1923508497986 41 24.267618725853517 21.957784029142953 27.994951448832655 25.779645796170875 42 24.735274913217086 23.654230262248074 24.850722884606295 26.759771939928545 43 24.625866297419883 21.282426525549976 27.16169543092115 26.93001174610899 44 26.455878568690228 23.059485026774475 25.371945530264174 25.11269087427112 45 21.52636397533142 25.64905567235533 25.84091462101731 26.983665731295943 46 22.907800921833232 24.372213362555645 25.97736904663958 26.742616668971543 47 24.973960749440266 23.454231312570787 27.966155101154826 23.605652836834118 48 24.498952303095127 21.72706314014981 29.54015121145972 24.23383334529534 49 22.72863337260373 21.986317796142867 27.012199498295853 28.27284933295755 50 21.83542143323536 23.497294543748566 29.20816170768469 25.459122315331385 51 24.062105581940052 23.654667896711263 26.348308017638423 25.934918503710264 52 23.229199671599098 21.33319212327988 28.148473618519287 27.289134586601733 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 303.0 1 228.0 2 153.0 3 129.0 4 105.0 5 121.0 6 137.0 7 204.5 8 272.0 9 372.5 10 473.0 11 529.5 12 586.0 13 521.5 14 676.0 15 895.0 16 842.5 17 790.0 18 885.0 19 980.0 20 974.0 21 968.0 22 1723.0 23 2478.0 24 2511.5 25 2545.0 26 3801.5 27 5058.0 28 5756.0 29 6454.0 30 7816.5 31 9179.0 32 12732.5 33 16286.0 34 20743.5 35 25201.0 36 27242.5 37 29284.0 38 29601.5 39 34916.5 40 39914.0 41 48747.5 42 57581.0 43 59802.5 44 62024.0 45 68817.5 46 75611.0 47 82038.0 48 88465.0 49 100533.5 50 112602.0 51 112926.0 52 113250.0 53 101636.5 54 90023.0 55 79125.5 56 68228.0 57 66552.0 58 64876.0 59 62832.0 60 60788.0 61 56626.0 62 52464.0 63 46678.5 64 34071.5 65 27250.0 66 23408.0 67 19566.0 68 17033.0 69 14500.0 70 11689.5 71 8879.0 72 7455.5 73 6032.0 74 4343.0 75 2654.0 76 2150.0 77 1646.0 78 1621.0 79 1596.0 80 1169.5 81 743.0 82 524.0 83 305.0 84 169.5 85 34.0 86 28.5 87 23.0 88 16.5 89 8.5 90 7.0 91 4.5 92 2.0 93 4.5 94 7.0 95 5.0 96 3.0 97 2.5 98 2.0 99 3.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1142506.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.241631490172086 #Duplication Level Percentage of deduplicated Percentage of total 1 68.82217906769193 11.177844707680876 2 12.278170562358158 3.9883504329460036 3 5.246033942877926 2.5561245025547326 4 2.9081740561928116 1.8893396531985063 5 1.7434254402058618 1.415803676520733 6 1.0960170698634768 1.068066321339647 7 0.8055309112750545 0.915819535041036 8 0.5454009834762891 0.7086561430399458 9 0.4552482297322392 0.665457658547781 >10 3.0476215131797395 10.661796985459798 >50 1.1637955749208748 13.984981095547088 >100 1.8776117759500963 48.12125173171912 >500 0.004316348910230107 0.5046651176718567 >1k 0.00647452336534516 2.3418424387328876 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGCTT 4676 0.40927574997417954 Illumina Single End Adapter 2 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGCT 2960 0.25907960220777837 Illumina Single End Adapter 2 (95% over 21bp) GTCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 2883 0.2523400314746706 No Hit TGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 2844 0.24892648266179782 No Hit GCCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 2576 0.22546927543487735 No Hit TTCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 2283 0.1998238958920128 No Hit GGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 1895 0.1658634615485608 No Hit ATCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 1690 0.1479204485578194 No Hit ACCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 1376 0.12043700426956183 No Hit AGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 1319 0.11544797138920934 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.42511811754161466 0.0 2 0.0 0.0 0.0 0.8838465618561303 0.0 3 0.0 0.0 0.0 2.813989598304079 0.0 4 0.0 0.0 0.0 3.2314928761862083 0.0 5 0.0 0.0 0.0 3.94781296553366 0.0 6 0.0 0.0 0.0 6.1471887237353675 0.0 7 0.0 0.0 0.0 6.43348918955349 0.0 8 0.0 0.0 0.0 6.9732675364505745 0.0 9 0.0 0.0 0.0 7.331515108016938 0.0 10 0.0 0.0 0.0 8.533609451503974 0.0 11 0.0 0.0 0.0 9.547433448927183 0.0 12 0.0 0.0 0.0 9.98655586929084 0.0 13 0.0 0.0 0.0 10.216664070035518 0.0 14 0.0 0.0 0.0 10.349354839274367 0.0 15 0.0 0.0 0.0 10.540250992117327 0.0 16 0.0 0.0 0.0 11.000029759143496 0.0 17 0.0 0.0 0.0 11.627947686926808 0.0 18 0.0 0.0 0.0 12.361773154801813 0.0 19 8.752689263776296E-5 0.0 0.0 12.775162668729967 0.0 20 8.752689263776296E-5 0.0 0.0 13.250696276430933 0.0 21 8.752689263776296E-5 0.0 0.0 13.966228623744646 0.0 22 8.752689263776296E-5 0.0 0.0 14.546094287469826 0.0 23 8.752689263776296E-5 0.0 0.0 15.16333393435133 0.0 24 0.0017505378527552591 0.0 0.0 15.638955068944933 0.0 25 0.0017505378527552591 0.0 0.0 16.057596196431355 0.0 26 0.0017505378527552591 0.0 0.0 16.44814119138105 0.0 27 0.0017505378527552591 0.0 0.0 16.797373493005725 0.0 28 0.0017505378527552591 0.0 0.0 17.165949237903344 0.0 29 0.0017505378527552591 0.0 0.0 17.53505014415679 0.0 30 0.0017505378527552591 0.0 0.0 17.965332348364036 0.0 31 0.0017505378527552591 0.0 0.0 18.34038508331685 0.0 32 0.0017505378527552591 0.0 0.0 18.75114879046587 0.0 33 0.0017505378527552591 0.0 0.0 19.134429053326635 0.0 34 0.0017505378527552591 0.0 0.0 19.506068239466575 0.0 35 0.001838064745393022 0.0 0.0 19.943527648870116 0.0 36 0.001925591638030785 0.0 0.0 20.339936945626544 0.0 37 0.002013118530668548 0.0 0.0 20.74002237187376 0.0 38 0.002100645423306311 0.0 0.0 21.15463726229884 0.0 39 0.002100645423306311 0.0 0.0 21.545357311033815 0.0 40 0.002100645423306311 0.0 0.0 21.98780575331771 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 30 1.8613937E-6 46.0 42 AACGTAC 25 3.417144E-5 46.0 28 CGTGGCA 25 3.417144E-5 46.0 31 AACCGGT 20 6.3114386E-4 46.0 18 ACTATCG 20 6.3114386E-4 46.0 23 GGTACTC 20 6.3114386E-4 46.0 10 AGCCGAC 30 1.8613937E-6 46.0 29 GGTACGC 25 3.417144E-5 46.0 9 TACCCGC 40 5.6115823E-9 46.0 24 GCCCACG 30 1.8613937E-6 46.0 39 CGAACAA 20 6.3114386E-4 46.0 39 CTCCGTA 30 1.8613937E-6 46.0 10 ATCTACG 30 1.8613937E-6 46.0 46 TACCACG 40 5.6115823E-9 46.0 45 ACCGCGA 20 6.3114386E-4 46.0 12 GACCGTA 20 6.3114386E-4 46.0 45 GGCGTAA 30 1.8613937E-6 46.0 31 ACCGAAC 20 6.3114386E-4 46.0 12 ATTCGCG 30 1.8613937E-6 46.0 1 AAGCGTG 25 3.417144E-5 46.0 32 >>END_MODULE