##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545603_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1765171 Sequences flagged as poor quality 0 Sequence length 52 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.57543376817317 33.0 31.0 34.0 31.0 34.0 2 32.989915991141935 34.0 31.0 34.0 31.0 34.0 3 33.06743369339288 34.0 33.0 34.0 31.0 34.0 4 36.443137237128866 37.0 37.0 37.0 35.0 37.0 5 36.41928742314484 37.0 37.0 37.0 35.0 37.0 6 36.427990829217116 37.0 37.0 37.0 35.0 37.0 7 36.505360103921944 37.0 37.0 37.0 35.0 37.0 8 36.54397959177893 37.0 37.0 37.0 35.0 37.0 9 38.35167187768211 39.0 39.0 39.0 37.0 39.0 10 38.12182049217895 39.0 39.0 39.0 37.0 39.0 11 37.94739376524994 39.0 38.0 39.0 35.0 39.0 12 37.580400992311795 39.0 37.0 39.0 35.0 39.0 13 37.50446160740234 39.0 37.0 39.0 35.0 39.0 14 38.630196167963334 41.0 38.0 41.0 35.0 41.0 15 38.76805476636541 41.0 38.0 41.0 35.0 41.0 16 38.859790354588874 41.0 38.0 41.0 35.0 41.0 17 38.82035451522827 41.0 38.0 41.0 35.0 41.0 18 38.800185930994786 40.0 38.0 41.0 35.0 41.0 19 38.790252615752244 40.0 38.0 41.0 35.0 41.0 20 38.673514350734294 40.0 38.0 41.0 35.0 41.0 21 38.63960262206891 40.0 38.0 41.0 35.0 41.0 22 38.790612920787844 40.0 38.0 41.0 35.0 41.0 23 38.802803807676426 40.0 38.0 41.0 35.0 41.0 24 38.741777425529875 40.0 38.0 41.0 35.0 41.0 25 38.66637793165648 40.0 38.0 41.0 35.0 41.0 26 38.56082441871071 40.0 37.0 41.0 35.0 41.0 27 38.49014967954946 40.0 37.0 41.0 35.0 41.0 28 38.42811319696505 40.0 37.0 41.0 35.0 41.0 29 38.36732758469293 40.0 37.0 41.0 35.0 41.0 30 38.300101803168076 40.0 36.0 41.0 34.0 41.0 31 38.21363142721017 40.0 36.0 41.0 34.0 41.0 32 38.17060556739262 40.0 36.0 41.0 34.0 41.0 33 38.09101271208285 40.0 36.0 41.0 34.0 41.0 34 37.93549406828007 40.0 35.0 41.0 34.0 41.0 35 37.87487217952255 40.0 35.0 41.0 34.0 41.0 36 37.78490922409217 40.0 35.0 41.0 34.0 41.0 37 37.67777116211404 40.0 35.0 41.0 33.0 41.0 38 37.58823649380145 40.0 35.0 41.0 33.0 41.0 39 37.46861918760279 40.0 35.0 41.0 33.0 41.0 40 37.36600363364229 40.0 35.0 41.0 33.0 41.0 41 37.198675369128544 39.0 35.0 41.0 33.0 41.0 42 37.12769074497598 39.0 35.0 41.0 33.0 41.0 43 37.073102266012754 39.0 35.0 41.0 33.0 41.0 44 36.95387698982138 39.0 35.0 41.0 33.0 41.0 45 36.87600011556954 39.0 35.0 41.0 32.0 41.0 46 36.841893504935214 39.0 35.0 41.0 32.0 41.0 47 36.79388059287174 38.0 35.0 41.0 32.0 41.0 48 36.687435948131935 38.0 35.0 41.0 32.0 41.0 49 36.585917738281445 38.0 35.0 40.0 32.0 41.0 50 36.48744852481714 38.0 35.0 40.0 32.0 41.0 51 36.36977493965174 38.0 35.0 40.0 32.0 41.0 52 36.03464876773978 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 3.0 11 9.0 12 17.0 13 21.0 14 41.0 15 71.0 16 106.0 17 175.0 18 311.0 19 576.0 20 964.0 21 1505.0 22 2086.0 23 2974.0 24 4129.0 25 5358.0 26 6859.0 27 8882.0 28 10907.0 29 13935.0 30 17971.0 31 23169.0 32 30219.0 33 44621.0 34 109672.0 35 159313.0 36 109858.0 37 158739.0 38 278037.0 39 773567.0 40 1071.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.942375554549674 13.513874859716141 47.114188936935854 12.429560648798333 2 25.062840937223648 12.73814265020216 50.22312285891849 11.975893553655709 3 25.615478613686722 13.853955225867637 45.673648615346615 14.85691754509903 4 23.416428210071434 14.537968276161347 46.98009427981765 15.065509233949573 5 22.708111565395082 17.027358822459693 44.69969198451595 15.564837627629277 6 25.811097055186156 18.582675559478375 43.831164232813705 11.775063152521767 7 88.18822652309606 2.3835651050238194 5.74924469074101 3.678963681139108 8 89.25628168602361 2.4337018906383574 5.839490904847179 2.470525518490843 9 82.20263079327725 4.722545294478552 7.443358178895982 5.6314657333482145 10 43.87178352692175 24.894302025129576 13.269705881186583 17.96420856676209 11 35.25618764414326 22.265208299932414 24.231023509903572 18.247580546020753 12 29.057128176250345 22.750373759822704 26.6250125341964 21.567485529730547 13 25.887350290708376 22.519064725173934 32.41125080799537 19.18233417612231 14 19.92316891677917 28.508229514307683 32.53163574520542 19.03696582370773 15 20.898598492723934 21.77947632269055 36.24696984031575 21.07495534426976 16 26.64166814433276 22.259826385092435 29.917441426354728 21.181064044220076 17 26.475508605115312 21.03393948801561 27.298205103075002 25.19234680379408 18 26.710556654284485 20.745355549122436 29.00523518684592 23.538852609747156 19 27.050070503084406 23.786477344121334 27.057945094271318 22.105507058522942 20 26.661496251637946 24.7031590707076 25.238461316212423 23.396883361442036 21 27.60072536881696 23.780812170605568 28.191602966511457 20.42685949406601 22 29.056505007163615 19.328665608034576 26.949457021444385 24.66537236335743 23 28.497918898508985 22.410859911022783 25.24656251433997 23.84465867612826 24 27.607296970095245 22.21966030486565 26.883684356926324 23.28935836811278 25 30.362270850812756 22.365481871161492 23.92714360251783 23.345103675507925 26 24.30110170629361 25.20486683726392 24.06865963694169 26.425371819500775 27 23.101784473005733 21.889720599307374 28.75789371114753 26.25060121653936 28 23.28760216432289 23.009045582552627 29.001722779266142 24.70162947385834 29 23.32402923002927 24.90693536206974 26.78924591441849 24.979789493482503 30 27.854241883647536 23.076857709536355 27.313727678508204 21.755172728307908 31 26.377614406762856 23.66643231732223 26.11673316636179 23.839220109553125 32 29.949846218864916 23.77004834092561 23.73894653832405 22.541158901885428 33 30.798885773672918 21.503808979413325 24.018522851327152 23.6787823955866 34 23.34521697897824 23.017599994561433 28.33334560787595 25.303837418584372 35 25.913183481940276 23.77021829613108 28.53083355663559 21.78576466529305 36 28.170471869297646 24.220259680223617 24.655741568380627 22.953526882098107 37 26.12398458846197 25.453964516752205 25.710143663135188 22.711907231650645 38 26.699849476339686 22.952393847394955 26.878642352497295 23.469114323768064 39 26.009264824767687 23.668755038463697 23.708467904809222 26.613512231959398 40 28.548452246269623 21.366995039007552 27.442157162110643 22.642395552612182 41 24.793461936548926 22.013334685421412 27.46226852809161 25.730934849938052 42 22.92049892050119 24.013820757309066 27.512235358500675 25.55344496368907 43 23.219676733868845 21.097955948743778 28.656713712155934 27.025653605231447 44 26.426958068085188 22.276028781347527 26.11763959412431 25.179373556442975 45 23.091643812412507 22.387009530521407 27.24194993006343 27.279396727002652 46 23.67226744604347 22.583024534166945 26.24980809224715 27.49489992754243 47 24.14791541442727 23.129260564557203 29.517026962260314 23.205797058755216 48 24.09324649000012 22.99726202163983 29.910020049049074 22.999471439310977 49 24.797257602804486 21.95521000514964 26.62665543451598 26.620876957529894 50 23.37156003582656 22.287755690525167 28.281735877147312 26.058948396500963 51 25.032872169325238 22.8053825946608 26.544000552920938 25.617744683093026 52 23.823980792795712 21.51128700845414 27.359502280515596 27.305229918234552 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 130.0 1 101.5 2 73.0 3 71.0 4 69.0 5 110.5 6 152.0 7 199.5 8 247.0 9 317.5 10 388.0 11 515.5 12 643.0 13 702.5 14 830.5 15 899.0 16 1033.0 17 1167.0 18 1114.5 19 1062.0 20 1449.5 21 1837.0 22 2601.5 23 3366.0 24 5266.0 25 7166.0 26 8320.5 27 9475.0 28 10655.5 29 11836.0 30 15265.0 31 18694.0 32 20118.0 33 21542.0 34 26204.0 35 30866.0 36 35155.5 37 39445.0 38 42159.5 39 52421.0 40 59968.0 41 70339.0 42 80710.0 43 89716.0 44 98722.0 45 108802.0 46 118882.0 47 139898.5 48 160915.0 49 166879.0 50 172843.0 51 161375.5 52 149908.0 53 136903.0 54 123898.0 55 119924.0 56 115950.0 57 112225.0 58 108500.0 59 100826.5 60 93153.0 61 87553.0 62 81953.0 63 70430.5 64 53414.5 65 47921.0 66 40726.0 67 33531.0 68 28500.0 69 23469.0 70 19573.0 71 15677.0 72 13263.5 73 10850.0 74 8454.5 75 6059.0 76 5114.0 77 4169.0 78 3272.5 79 2376.0 80 1762.5 81 1149.0 82 829.5 83 510.0 84 318.5 85 127.0 86 142.5 87 158.0 88 103.0 89 35.5 90 23.0 91 22.5 92 22.0 93 20.0 94 18.0 95 22.0 96 26.0 97 17.5 98 9.0 99 17.5 100 26.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1765171.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.24054966403589 #Duplication Level Percentage of deduplicated Percentage of total 1 70.60377714300856 12.878517034455694 2 11.566416702826189 4.219555966056706 3 4.652559188513946 2.545957108288654 4 2.3086876328716217 1.6844692570456103 5 1.2928667971752081 1.17913005114287 6 0.9099309080459304 0.995858395143184 7 0.6364360073945373 0.8126259820602537 8 0.4845463191980679 0.7070712959886515 9 0.39462331954364566 0.6478331632850314 >10 4.074638468264564 17.85846230324621 >50 1.874446065205008 24.99992631285097 >100 1.1929959740335272 28.929592792979307 >500 0.003416546658121271 0.40496466995477065 >1k 0.004348332110336163 1.8470989276070775 >5k 3.105951507382974E-4 0.28893673989498186 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGCTT 5100 0.2889238493041184 Illumina Single End Adapter 1 (95% over 22bp) GTCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 3932 0.22275462263995952 No Hit GCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGCT 3321 0.188140412458623 Illumina Single End Adapter 1 (95% over 21bp) TGCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 3282 0.18593099478747385 No Hit GCCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 3280 0.1858176913171585 No Hit TTCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 3163 0.17918943830371106 No Hit ATCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 2864 0.16225056949156766 No Hit GGCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 2767 0.15675535118127365 No Hit ACCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 1832 0.10378597880885194 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3045597282076354 0.0 2 0.0 0.0 0.0 0.6543841928062494 0.0 3 0.0 0.0 0.0 2.3225511862590085 0.0 4 0.0 0.0 0.0 2.669373108894266 0.0 5 5.665173515767028E-5 0.0 0.0 3.3051755325687995 0.0 6 5.665173515767028E-5 0.0 0.0 5.2268590408521325 0.0 7 5.665173515767028E-5 0.0 0.0 5.485020997965636 0.0 8 5.665173515767028E-5 0.0 0.0 5.956816648358714 0.0 9 5.665173515767028E-5 0.0 0.0 6.288285950766243 0.0 10 5.665173515767028E-5 0.0 0.0 7.386706443738312 0.0 11 5.665173515767028E-5 0.0 0.0 8.350862324386702 0.0 12 5.665173515767028E-5 0.0 0.0 8.736377382134648 0.0 13 1.1330347031534056E-4 0.0 0.0 8.939813763085843 0.0 14 1.1330347031534056E-4 0.0 0.0 9.06048195897168 0.0 15 1.1330347031534056E-4 0.0 0.0 9.239501442069919 0.0 16 1.1330347031534056E-4 0.0 0.0 9.640595726986223 0.0 17 1.1330347031534056E-4 0.0 0.0 10.151990940254514 0.0 18 1.1330347031534056E-4 0.0 0.0 10.69851022932056 0.0 19 1.1330347031534056E-4 0.0 0.0 11.08266564542472 0.0 20 1.1330347031534056E-4 0.0 0.0 11.529421228878109 0.0 21 1.6995520547301082E-4 0.0 0.0 12.179896451958479 0.0 22 1.6995520547301082E-4 0.0 0.0 12.763409324082483 0.0 23 1.6995520547301082E-4 0.0 0.0 13.324318153878576 0.0 24 1.6995520547301082E-4 0.0 0.0 13.747789874182162 0.0 25 1.6995520547301082E-4 0.0 0.0 14.146958000103107 0.0 26 1.6995520547301082E-4 0.0 0.0 14.520292934792153 0.0 27 1.6995520547301082E-4 0.0 0.0 14.932207701123573 0.0 28 1.6995520547301082E-4 0.0 0.0 15.287414080562167 0.0 29 1.6995520547301082E-4 0.0 0.0 15.71966681981519 0.0 30 1.6995520547301082E-4 0.0 0.0 16.172427487195293 0.0 31 1.6995520547301082E-4 0.0 0.0 16.562418032020695 0.0 32 1.6995520547301082E-4 0.0 0.0 16.973086460178646 0.0 33 1.6995520547301082E-4 0.0 0.0 17.384774619569434 0.0 34 1.6995520547301082E-4 0.0 0.0 17.84642960936929 0.0 35 1.6995520547301082E-4 0.0 0.0 18.333181317843994 0.0 36 1.6995520547301082E-4 0.0 0.0 18.736031806550187 0.0 37 1.6995520547301082E-4 0.0 0.0 19.16290263096323 0.0 38 1.6995520547301082E-4 0.0 0.0 19.666196646103977 0.0 39 1.6995520547301082E-4 0.0 0.0 20.57772306479089 0.0 40 1.6995520547301082E-4 0.0 0.0 21.026234852034165 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAATCCG 35 1.0199801E-7 46.000004 41 GACGTAT 20 6.312377E-4 46.000004 12 ATTACGA 20 6.312377E-4 46.000004 41 CGATTAC 20 6.312377E-4 46.000004 37 ACTCGAT 30 1.8619739E-6 46.0 12 GTATACG 30 1.8619739E-6 46.0 1 TAATGCG 25 3.417906E-5 46.0 1 GCGTAAT 25 3.417906E-5 46.0 46 TTGTACG 140 0.0 42.714287 1 CTATGCG 60 1.8189894E-12 42.166668 1 TCGTAAG 60 1.8189894E-12 42.166668 1 CCGATAG 50 8.731149E-10 41.399998 11 CCGATCA 45 1.589251E-8 40.888885 38 CGGATAA 125 0.0 40.48 11 ACGTAGG 75 0.0 39.86667 2 TACGGGA 660 0.0 39.727272 4 CGATTAG 35 5.3747463E-6 39.428574 1 TACGCGA 35 5.3747463E-6 39.428574 29 TCGTTAG 105 0.0 39.42857 1 TTGGGAC 2750 0.0 38.472725 5 >>END_MODULE