SRR1545602_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545602_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	849551
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	4502	0.5299269849602908	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2488	0.2928605816484237	No Hit
ATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTG	1935	0.22776737358910765	No Hit
ATGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT	1689	0.19881090128785675	No Hit
CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT	1669	0.1964567165479177	No Hit
ATGTCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC	1450	0.17067839364558454	No Hit
ATTGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC	1366	0.16079081773784032	No Hit
ATGCCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC	1246	0.14666570929820574	No Hit
ATTAGTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT	1165	0.1371312611014524	No Hit
CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC	1162	0.13677813339046155	No Hit
ATGTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT	1148	0.13513020407250417	No Hit
ATATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC	1125	0.13242289162157422	No Hit
GCCCTGCTAGAGGACTTGCGTCTGTATCTATGCTCTGCCCCATGCAGCTCC	1038	0.12218218800283914	No Hit
ATGGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC	1020	0.12006342173689397	No Hit
ATTTCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC	976	0.11488421530902794	No Hit
ATTGTTCTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT	918	0.10805707956320455	No Hit
ATAGTTTAGGGAAGGCATCATTATAACTAAAAATGGGATATATTCCTTATA	881	0.10370183779431724	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAT	30	2.1648302E-6	45.000004	42
GTCATCG	30	2.1648302E-6	45.000004	43
GACAGTA	30	2.1648302E-6	45.000004	11
AAACTCG	20	7.0322456E-4	45.000004	43
ACTATGT	20	7.0322456E-4	45.000004	45
ACTATCC	30	2.1648302E-6	45.000004	43
CCTTAGT	20	7.0322456E-4	45.000004	25
GATACGA	20	7.0322456E-4	45.000004	13
GGTACGT	20	7.0322456E-4	45.000004	28
CCGGGTA	20	7.0322456E-4	45.000004	35
GTACCAC	20	7.0322456E-4	45.000004	11
TACCCGG	30	2.1648302E-6	45.000004	19
CGAACGG	20	7.0322456E-4	45.000004	13
CGAACAC	20	7.0322456E-4	45.000004	17
CGTATTA	30	2.1648302E-6	45.000004	26
ACGCCCG	30	2.1648302E-6	45.000004	28
CTCCGTC	20	7.0322456E-4	45.000004	22
CTACTAT	40	6.8121153E-9	45.000004	35
ATCTAAT	30	2.1648302E-6	45.000004	1
GATCGCG	20	7.0322456E-4	45.000004	11