##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545602_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 849551 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.89871473284123 31.0 31.0 34.0 31.0 34.0 2 32.57786171754256 34.0 31.0 34.0 31.0 34.0 3 32.51823492644938 34.0 31.0 34.0 31.0 34.0 4 35.99682302769345 37.0 35.0 37.0 35.0 37.0 5 35.75893619099972 37.0 35.0 37.0 35.0 37.0 6 35.759912000574424 37.0 35.0 37.0 35.0 37.0 7 35.74056766456634 37.0 35.0 37.0 33.0 37.0 8 35.700013301143784 37.0 35.0 37.0 33.0 37.0 9 37.92660946782477 39.0 38.0 39.0 35.0 39.0 10 37.91646999414985 39.0 38.0 39.0 35.0 39.0 11 37.71118861610427 39.0 38.0 39.0 35.0 39.0 12 37.210972619654385 39.0 37.0 39.0 33.0 39.0 13 36.85994719563628 39.0 35.0 39.0 33.0 39.0 14 37.06415506544045 39.0 35.0 41.0 32.0 41.0 15 36.70468047239071 39.0 35.0 41.0 31.0 41.0 16 36.79935872007684 39.0 35.0 41.0 31.0 41.0 17 37.0381578033573 39.0 35.0 41.0 32.0 41.0 18 37.12641618925762 39.0 35.0 41.0 32.0 41.0 19 37.10893165919409 38.0 35.0 41.0 32.0 41.0 20 37.10848083281639 38.0 35.0 41.0 32.0 41.0 21 37.09615432151807 38.0 35.0 41.0 32.0 41.0 22 36.9805544340481 38.0 35.0 41.0 32.0 41.0 23 36.898701784825164 38.0 35.0 41.0 32.0 41.0 24 36.868672981374864 38.0 35.0 41.0 32.0 41.0 25 36.8288637174225 38.0 35.0 41.0 32.0 41.0 26 36.73532018678102 38.0 35.0 41.0 32.0 41.0 27 36.63736373684452 38.0 35.0 41.0 31.0 41.0 28 36.490380212606425 38.0 35.0 41.0 31.0 41.0 29 36.36323540317179 38.0 35.0 41.0 31.0 41.0 30 36.31394701436406 38.0 35.0 41.0 31.0 41.0 31 36.23572804928721 38.0 35.0 40.0 31.0 41.0 32 36.14547213763505 38.0 35.0 40.0 30.0 41.0 33 35.97579074122684 37.0 35.0 40.0 30.0 41.0 34 35.86373978725233 37.0 35.0 40.0 30.0 41.0 35 35.789378153871866 37.0 35.0 40.0 30.0 41.0 36 35.71010804530864 37.0 35.0 40.0 30.0 41.0 37 35.51371018337922 37.0 34.0 40.0 29.0 41.0 38 35.45093231601163 37.0 34.0 40.0 29.0 41.0 39 35.366674867076846 37.0 34.0 40.0 29.0 41.0 40 35.30404531334788 36.0 34.0 40.0 28.0 41.0 41 35.31883547897654 36.0 34.0 40.0 29.0 41.0 42 35.135040745052386 36.0 34.0 40.0 28.0 41.0 43 35.0851897060918 36.0 34.0 40.0 28.0 41.0 44 34.98918134402761 36.0 34.0 40.0 28.0 41.0 45 34.94046149083457 36.0 34.0 40.0 28.0 41.0 46 34.84207422509066 35.0 34.0 40.0 27.0 41.0 47 34.74141281688798 35.0 34.0 40.0 27.0 41.0 48 34.699764934653714 35.0 34.0 40.0 27.0 41.0 49 34.65360878864247 35.0 34.0 40.0 27.0 41.0 50 34.55937195059508 35.0 34.0 39.0 27.0 41.0 51 34.38933389519876 35.0 34.0 39.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 2.0 11 10.0 12 9.0 13 10.0 14 14.0 15 24.0 16 42.0 17 120.0 18 248.0 19 464.0 20 835.0 21 1434.0 22 2311.0 23 3506.0 24 4967.0 25 7213.0 26 9753.0 27 11705.0 28 13348.0 29 15717.0 30 18734.0 31 23219.0 32 29283.0 33 38836.0 34 65507.0 35 149347.0 36 59211.0 37 77569.0 38 109614.0 39 206377.0 40 117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 1.8864082321131987 91.72468751140308 2.5994907898407513 3.789413466642968 2 3.0743298518864672 2.43834684439192 91.72598231301005 2.761340990711564 3 26.51541814440805 15.784220135106663 44.54400030133564 13.156361419149645 4 26.126271406896112 15.879446907837199 43.881532715516784 14.112748969749903 5 22.96401275497292 15.436860176728647 47.75604996050855 13.843077107789881 6 20.798869049650932 14.64361762860617 49.44235248972693 15.11516083201597 7 22.491881005378133 17.37776778557144 46.23960186027678 13.890749348773646 8 24.86478151399975 18.757790880123736 44.22806870923582 12.149358896640695 9 83.30482807977391 3.79706456704777 8.905174615767624 3.992932737410703 10 85.28940581554257 3.30810039656242 8.297559534389343 3.104934253505675 11 78.96912604422806 5.901352596842332 9.0955104519917 6.0340109069379 12 50.5915477705282 19.61071201140367 14.41161272248517 15.38612749558296 13 41.741225659201156 21.625658730317543 21.48711495837213 15.146000652109173 14 34.754711606483895 23.99149668471934 24.048350246188868 17.205441462607894 15 21.287833220136285 34.471032345321234 29.233559845141727 15.007574589400754 16 15.224630422423138 38.89254441463785 31.465797815551984 14.417027347387032 17 15.31550195338479 21.207084683556374 46.27185419121395 17.205559171844893 18 18.619247108178318 19.385534241028495 42.71114977205606 19.28406887873712 19 19.292779362274896 18.49588782780551 29.32195948212644 32.88937332779315 20 23.155290265092972 20.51518978848827 34.23596699903831 22.09355294738044 21 28.025274527367987 22.41784189530705 29.757365949778176 19.799517627546788 22 29.538779896674832 21.5152474660144 25.120681395231127 23.82529124207964 23 23.30725289005604 27.431666845192343 28.338969643964873 20.922110620786746 24 27.659669637255448 20.899981284231316 25.561973324732712 25.878375753780524 25 24.37146210174551 27.16705648042319 23.102791945392333 25.35868947243897 26 24.753899412748616 20.268000390794665 34.76448147315464 20.213618723302073 27 24.65172779503526 21.932526711168606 31.174820581695506 22.240924912100628 28 19.584345142316355 29.77772964777865 27.464625431551493 23.173299778353506 29 21.35951814546743 29.616585702329818 26.680917331625764 22.342978820576988 30 20.9470649790301 26.297185219015688 34.0316237636116 18.724126038342607 31 18.964723718764382 24.943058156602724 32.01703017240872 24.075187952224177 32 22.37534886075115 28.43560892753937 28.62229577741654 20.566746434292938 33 30.210428802979454 23.19401660406497 24.82558433807976 21.769970254875812 34 29.099842151913187 25.6783877601227 25.35245088287813 19.86931920508598 35 28.73023514774275 25.238626050702077 24.2287985065052 21.802340295049973 36 23.97489968230277 24.172651200457654 27.453678472510774 24.398770644728803 37 22.88667778626592 25.931227201192158 30.253039546772353 20.929055465769565 38 29.148102939081937 24.377347563595357 24.007152013239935 22.467397484082767 39 23.382939929445083 30.292942978114322 26.752719966193904 19.571397126246687 40 22.451624446325177 31.306772636369097 24.286476032633708 21.955126884672023 41 22.747780886609515 29.586569846895593 23.49911894636108 24.166530320133813 42 24.729886728401237 23.990908138534355 24.58675229621294 26.692452836851466 43 21.064656506790058 22.76343621513011 26.153579949879408 30.018327328200428 44 21.895801429225557 23.06806772047823 26.020803930546844 29.015326919749374 45 22.02092634815332 21.636487980121263 27.37704975922576 28.96553591249966 46 21.58328340499864 26.88408347468251 27.287708448345064 24.244924671973784 47 20.559919298547115 31.33773016569929 24.103438169103445 23.99891236665015 48 21.108444342952925 27.357039188936273 24.58722313316093 26.947293334949872 49 22.70670036289758 24.246925729002733 29.03557290851285 24.01080099958684 50 24.382291351549227 22.70316908578767 31.122793098942854 21.791746463720248 51 21.853661522380648 22.65019992913904 28.929046049030603 26.567092499449707 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 602.0 1 677.0 2 752.0 3 2379.5 4 4007.0 5 2787.5 6 1568.0 7 1560.5 8 1553.0 9 1716.0 10 1879.0 11 1959.5 12 2040.0 13 2111.5 14 2183.0 15 2259.0 16 2335.0 17 2067.0 18 1799.0 19 2170.0 20 2541.0 21 2804.5 22 3068.0 23 3349.5 24 3631.0 25 4419.0 26 7186.0 27 9165.0 28 8389.0 29 7613.0 30 9121.0 31 10629.0 32 12532.0 33 14435.0 34 15791.5 35 17148.0 36 21259.0 37 25370.0 38 35202.5 39 45035.0 40 54780.0 41 64525.0 42 69712.5 43 74900.0 44 75833.5 45 76767.0 46 80240.5 47 83714.0 48 85347.0 49 86980.0 50 80733.0 51 74486.0 52 63278.0 53 52070.0 54 45778.0 55 39486.0 56 37150.0 57 34814.0 58 34857.0 59 34900.0 60 29630.5 61 24361.0 62 20476.5 63 16592.0 64 12392.0 65 8192.0 66 6984.0 67 5776.0 68 5007.0 69 4238.0 70 3151.0 71 2064.0 72 2051.5 73 2039.0 74 1230.0 75 324.0 76 227.0 77 236.0 78 245.0 79 129.5 80 14.0 81 92.5 82 171.0 83 88.5 84 6.0 85 3.5 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 849551.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.553288995994293 #Duplication Level Percentage of deduplicated Percentage of total 1 72.6124620517204 12.019750690527964 2 11.670942468316563 3.86384967067334 3 4.831781190259585 2.399456112233286 4 2.5091031861304023 1.661356406431464 5 1.4584607481750373 1.2071161126927725 6 0.8992493001121127 0.8931320126520842 7 0.6489243274103857 0.7519282349708736 8 0.44257310758922713 0.5860832441423801 9 0.3291846342335846 0.4904179545158283 >10 2.3303712208347505 8.11139823179962 >50 0.6504473003281019 7.90970737463919 >100 1.59299032150453 55.91267196902437 >500 0.013536143161263893 1.4803798463396363 >1k 0.009974000224089185 2.712752139357178 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 4502 0.5299269849602908 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2488 0.2928605816484237 No Hit ATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTG 1935 0.22776737358910765 No Hit ATGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT 1689 0.19881090128785675 No Hit CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT 1669 0.1964567165479177 No Hit ATGTCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC 1450 0.17067839364558454 No Hit ATTGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC 1366 0.16079081773784032 No Hit ATGCCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC 1246 0.14666570929820574 No Hit ATTAGTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT 1165 0.1371312611014524 No Hit CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 1162 0.13677813339046155 No Hit ATGTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT 1148 0.13513020407250417 No Hit ATATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC 1125 0.13242289162157422 No Hit GCCCTGCTAGAGGACTTGCGTCTGTATCTATGCTCTGCCCCATGCAGCTCC 1038 0.12218218800283914 No Hit ATGGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC 1020 0.12006342173689397 No Hit ATTTCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC 976 0.11488421530902794 No Hit ATTGTTCTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT 918 0.10805707956320455 No Hit ATAGTTTAGGGAAGGCATCATTATAACTAAAAATGGGATATATTCCTTATA 881 0.10370183779431724 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.22211733021325383 0.0 2 0.0 0.0 0.0 1.0050014654800006 0.0 3 0.0 0.0 0.0 1.337883187707389 0.0 4 0.0 0.0 0.0 1.7543384682026153 0.0 5 0.0 0.0 0.0 3.3204598664471 0.0 6 0.0 0.0 0.0 3.651458240882537 0.0 7 0.0 0.0 0.0 4.205515619427203 0.0 8 0.0 0.0 0.0 5.836965644204998 0.0 9 0.0 0.0 0.0 6.031421303723967 0.0 10 0.0 0.0 0.0 6.421156587420884 0.0 11 0.0 0.0 0.0 6.7342631578327845 0.0 12 0.0 0.0 0.0 7.5308015645911786 0.0 13 0.0 0.0 0.0 8.281433368920759 0.0 14 0.0 0.0 0.0 8.579355447760053 0.0 15 0.0 0.0 0.0 8.740734811682877 0.0 16 0.0 0.0 0.0 8.84384810329221 0.0 17 0.0 0.0 0.0 8.986158570821528 0.0 18 2.3541847399390973E-4 0.0 0.0 9.336696678598459 0.0 19 2.3541847399390973E-4 0.0 0.0 9.798352306100517 0.0 20 3.531277109908646E-4 0.0 0.0 10.330280348089756 0.0 21 3.531277109908646E-4 0.0 0.0 10.64397546468664 0.0 22 3.531277109908646E-4 0.0 0.0 10.994395863226575 0.0 23 3.531277109908646E-4 0.0 0.0 11.496661177492582 0.0 24 3.531277109908646E-4 0.0 0.0 11.902640335895079 0.0 25 3.531277109908646E-4 0.0 0.0 12.352407330460442 0.0 26 3.531277109908646E-4 0.0 0.0 12.68069839244495 0.0 27 3.531277109908646E-4 0.0 0.0 12.968968313850493 0.0 28 3.531277109908646E-4 0.0 0.0 13.266537264978794 0.0 29 3.531277109908646E-4 0.0 0.0 13.543389390395632 0.0 30 3.531277109908646E-4 0.0 0.0 13.834013496541115 0.0 31 3.531277109908646E-4 0.0 0.0 14.102272847657174 0.0 32 3.531277109908646E-4 0.0 0.0 14.433742059040599 0.0 33 3.531277109908646E-4 0.0 0.0 14.745082990897545 0.0 34 3.531277109908646E-4 0.0 0.0 15.057718724361457 0.0 35 3.531277109908646E-4 0.0 0.0 15.368824237744409 0.0 36 3.531277109908646E-4 0.0 0.0 15.677693275624419 0.0 37 3.531277109908646E-4 0.0 0.0 16.038118959309095 0.0 38 3.531277109908646E-4 0.0 0.0 16.348165089559075 0.0 39 3.531277109908646E-4 0.0 0.0 16.67421967604064 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAT 30 2.1648302E-6 45.000004 42 GTCATCG 30 2.1648302E-6 45.000004 43 GACAGTA 30 2.1648302E-6 45.000004 11 AAACTCG 20 7.0322456E-4 45.000004 43 ACTATGT 20 7.0322456E-4 45.000004 45 ACTATCC 30 2.1648302E-6 45.000004 43 CCTTAGT 20 7.0322456E-4 45.000004 25 GATACGA 20 7.0322456E-4 45.000004 13 GGTACGT 20 7.0322456E-4 45.000004 28 CCGGGTA 20 7.0322456E-4 45.000004 35 GTACCAC 20 7.0322456E-4 45.000004 11 TACCCGG 30 2.1648302E-6 45.000004 19 CGAACGG 20 7.0322456E-4 45.000004 13 CGAACAC 20 7.0322456E-4 45.000004 17 CGTATTA 30 2.1648302E-6 45.000004 26 ACGCCCG 30 2.1648302E-6 45.000004 28 CTCCGTC 20 7.0322456E-4 45.000004 22 CTACTAT 40 6.8121153E-9 45.000004 35 ATCTAAT 30 2.1648302E-6 45.000004 1 GATCGCG 20 7.0322456E-4 45.000004 11 >>END_MODULE