##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545598_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2011354 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.87008353576745 31.0 31.0 34.0 31.0 34.0 2 32.55101638001068 34.0 31.0 34.0 31.0 34.0 3 32.52572645093802 34.0 31.0 34.0 31.0 34.0 4 36.00863448204543 37.0 35.0 37.0 35.0 37.0 5 35.781973237928284 37.0 35.0 37.0 35.0 37.0 6 35.7876246548345 37.0 35.0 37.0 35.0 37.0 7 35.76808508099519 37.0 35.0 37.0 35.0 37.0 8 35.73016982589837 37.0 35.0 37.0 33.0 37.0 9 37.89159342413121 39.0 38.0 39.0 35.0 39.0 10 37.831766064054364 39.0 38.0 39.0 35.0 39.0 11 37.67863836997366 39.0 38.0 39.0 35.0 39.0 12 37.21368540793913 39.0 37.0 39.0 33.0 39.0 13 37.003742255217134 39.0 37.0 39.0 33.0 39.0 14 37.684469765143284 40.0 36.0 41.0 33.0 41.0 15 37.55189837293684 40.0 36.0 41.0 32.0 41.0 16 37.41928273193083 40.0 36.0 41.0 32.0 41.0 17 37.56998221098822 40.0 36.0 41.0 32.0 41.0 18 37.655827865209204 40.0 35.0 41.0 33.0 41.0 19 37.67245397876256 40.0 35.0 41.0 33.0 41.0 20 37.64006286312603 40.0 35.0 41.0 33.0 41.0 21 37.62563526858027 40.0 35.0 41.0 33.0 41.0 22 37.524375122429966 40.0 35.0 41.0 32.0 41.0 23 37.456715227652616 39.0 35.0 41.0 32.0 41.0 24 37.45317681522 39.0 35.0 41.0 32.0 41.0 25 37.41736263233623 39.0 35.0 41.0 32.0 41.0 26 37.315578958253994 39.0 35.0 41.0 32.0 41.0 27 37.22088851589526 39.0 35.0 41.0 32.0 41.0 28 37.147485226369895 39.0 35.0 41.0 32.0 41.0 29 37.06385002341706 39.0 35.0 41.0 31.0 41.0 30 36.96315119069045 39.0 35.0 41.0 31.0 41.0 31 36.84443563887809 39.0 35.0 41.0 31.0 41.0 32 36.74768389850817 39.0 35.0 41.0 31.0 41.0 33 36.569578502839384 39.0 35.0 41.0 30.0 41.0 34 36.536997465388986 39.0 35.0 41.0 30.0 41.0 35 36.47746393722836 39.0 35.0 41.0 30.0 41.0 36 36.33348033215436 38.0 35.0 41.0 30.0 41.0 37 36.24705695765141 38.0 35.0 41.0 30.0 41.0 38 36.14374048526515 38.0 35.0 41.0 30.0 41.0 39 36.0619264435798 38.0 35.0 40.0 30.0 41.0 40 35.96459399986278 38.0 35.0 40.0 29.0 41.0 41 35.886254234709554 38.0 35.0 40.0 29.0 41.0 42 35.7473373657745 38.0 35.0 40.0 28.0 41.0 43 35.61369853342574 38.0 34.0 40.0 28.0 41.0 44 35.54872140856359 38.0 34.0 40.0 28.0 41.0 45 35.51865658655811 37.0 34.0 40.0 28.0 41.0 46 35.44819907385771 37.0 34.0 40.0 28.0 41.0 47 35.35391333400287 37.0 34.0 40.0 28.0 41.0 48 35.29803754088042 37.0 34.0 40.0 28.0 41.0 49 35.25348745173649 37.0 34.0 40.0 28.0 41.0 50 35.12859794944102 36.0 34.0 40.0 28.0 41.0 51 34.96821693247434 36.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 24.0 11 22.0 12 28.0 13 34.0 14 47.0 15 66.0 16 140.0 17 257.0 18 592.0 19 1125.0 20 1883.0 21 3069.0 22 4824.0 23 7173.0 24 10367.0 25 14717.0 26 19811.0 27 24079.0 28 28543.0 29 33732.0 30 40976.0 31 50357.0 32 63890.0 33 82372.0 34 134617.0 35 220225.0 36 149395.0 37 209834.0 38 314714.0 39 594187.0 40 243.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.0983377366689306 91.13905359275394 3.3287029533339236 3.4339057172432104 2 3.4687081438672656 2.629522202456654 90.90001063959899 3.0017590140770842 3 28.57144987903671 16.16721869944326 41.65383120027603 13.607500221243999 4 28.051451907521002 15.14646352655972 43.263940609161786 13.538143956757487 5 25.229273414824043 13.644539946722457 46.069911114602405 15.056275523851099 6 23.427253481982785 14.002010585903824 46.99799239716131 15.572743534952076 7 23.71049551695027 16.868437878165654 43.80148894724648 15.619577657637592 8 25.97767474049819 19.06551507094226 43.24484899227088 11.71196119628867 9 81.61795487020186 4.415433583546209 9.300451337755563 4.6661602084963665 10 82.10523856069096 4.572790269639258 9.190425951871227 4.131545217798557 11 76.16928695793978 6.84245538080318 10.425166330740387 6.563091330516658 12 43.03334967390126 21.834246979895138 17.3511475354413 17.781255810762303 13 35.36801577444846 23.21103097714276 23.761356777573713 17.65959647083507 14 30.363476543661633 22.937931363648566 26.75555869329815 19.943033399391656 15 23.35038983689594 25.112188108110256 32.03588229620445 19.501539758789352 16 19.22252373276907 29.948383029541294 32.065663229844176 18.76343000784546 17 19.031508128355327 22.644447471703142 38.259997991402805 20.064046408538726 18 23.653170948525222 21.43799649390411 34.35397249812813 20.554860059442547 19 23.567358108020766 21.14908663517213 28.475096875040396 26.80845838176671 20 24.145774438512564 22.522141800995747 30.710605890360426 22.621477870131265 21 26.51189198917744 24.467050554004917 27.363059908897192 21.657997547920456 22 26.36602010387033 24.37134388078876 26.54505372997493 22.717582285365978 23 25.27217983507627 23.541256288052725 29.7748183561919 21.411745520679105 24 27.888974292938983 20.74612425261789 27.14479897621204 24.22010247823108 25 26.77037458348953 24.196387110374403 25.319908877303547 23.71332942883252 26 25.922637188679865 22.130316194961207 29.437831430966405 22.509215185392524 27 28.614455734793577 22.61874339375366 26.07820403568939 22.688596835763374 28 23.731874150447908 26.66253677870728 24.624954135373482 24.98063493547133 29 24.038085786987274 24.941457346643105 27.723613048722402 23.29684381764722 30 23.880132487866383 24.551421579692086 29.003646299955154 22.564799632486373 31 23.498499021057455 25.445247330902465 28.137165312520818 22.91908833551926 32 26.703852230885268 24.38775073905439 27.436343875816988 21.472053154243362 33 26.40340785361503 24.85300946526569 27.132071231618106 21.61151144950118 34 27.27520864054761 24.781863361695653 25.92646545560851 22.016462542148226 35 27.55218623872277 25.09414056401807 24.767246342513552 22.586426854745607 36 23.411045494726437 24.25749022797578 28.321767326885272 24.009696950412508 37 24.322769636772044 24.790066790828465 28.744716245872183 22.142447326527304 38 26.751879579626458 27.332384055715703 23.491041358209444 22.424695006448392 39 25.116811859076027 26.543413044148366 25.563923605690498 22.77585149108511 40 24.875283018305083 24.73458177923926 27.62735948023073 22.76277572222493 41 22.88388816687664 26.381184018327954 25.342779043370783 25.392148771424623 42 26.037137172273006 22.9095425270738 27.8090281472083 23.244292153444892 43 23.04736013650506 23.44301400946825 27.64520815331364 25.864417700713048 44 22.652750336340592 24.784597838073257 26.854745609176707 25.707906216409445 45 22.828502590792073 23.224753076783102 27.539160187614907 26.407584144809913 46 24.932160126959253 23.81674235365828 27.28231827912938 23.96877924025308 47 22.193010280636823 25.02209954090627 26.703255617857423 26.081634560599475 48 22.68695614993681 25.458621406276567 26.244460199447733 25.60996224433889 49 23.16076632954716 24.86310216898666 29.325717899484626 22.65041360198155 50 22.867729897372616 25.173440378968596 28.671581432209347 23.28724829144944 51 22.941312170806334 24.56056964611898 27.088269891824112 25.40984829125057 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 597.0 1 1186.0 2 1775.0 3 4928.5 4 8082.0 5 5757.5 6 3433.0 7 3323.5 8 3214.0 9 3425.5 10 3637.0 11 3857.0 12 4077.0 13 4186.0 14 4295.0 15 4184.0 16 4073.0 17 4719.5 18 5366.0 19 5240.0 20 5114.0 21 6298.5 22 7483.0 23 8126.0 24 8769.0 25 10502.5 26 17170.5 27 22105.0 28 22266.5 29 22428.0 30 27039.5 31 31651.0 32 36598.5 33 41546.0 34 49130.5 35 56715.0 36 62283.0 37 67851.0 38 75583.5 39 83316.0 40 98318.5 41 113321.0 42 125473.5 43 137626.0 44 152793.0 45 167960.0 46 178249.0 47 188538.0 48 182441.0 49 176344.0 50 159773.5 51 143203.0 52 132827.0 53 122451.0 54 120666.0 55 118881.0 56 115429.5 57 111978.0 58 102342.0 59 92706.0 60 83531.0 61 74356.0 62 65780.5 63 57205.0 64 49410.0 65 41615.0 66 33002.0 67 24389.0 68 20991.5 69 17594.0 70 14690.5 71 11787.0 72 8888.0 73 5989.0 74 4798.5 75 2817.0 76 2026.0 77 1606.5 78 1187.0 79 840.5 80 494.0 81 322.5 82 151.0 83 95.5 84 40.0 85 38.5 86 37.0 87 58.5 88 80.0 89 47.5 90 15.0 91 10.0 92 5.0 93 3.0 94 1.0 95 1.5 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2011354.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.549754127151765 #Duplication Level Percentage of deduplicated Percentage of total 1 72.56601693092533 12.00949738193546 2 11.053748039239085 3.658736244657855 3 4.535839571818514 2.252010890214052 4 2.335461515822603 1.5460525544115695 5 1.4535402694427972 1.202786703659611 6 0.9572431765931326 0.9505283527506035 7 0.6167389888412619 0.7144815038165756 8 0.46363974851926276 0.613849907325462 9 0.373129364699921 0.555767931906363 >10 2.8990671073857524 10.428446657893279 >50 1.0110365819438474 12.39665558556167 >100 1.7191514245559185 50.12503070609268 >500 0.009051341301519154 0.9889629171492227 >1k 0.006034227534346103 2.1630255785109145 >5k 3.017113767173051E-4 0.3941670841147109 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 7894 0.39247193681470294 TruSeq Adapter, Index 27 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4930 0.24510851893798902 No Hit ATGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCT 3555 0.17674660949788054 No Hit ATCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTG 3486 0.1733160845877951 TruSeq Adapter, Index 27 (95% over 21bp) ATGCCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 2868 0.14259051365398634 No Hit ATTGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 2821 0.14025377929494262 No Hit ATGTCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 2713 0.1348842620443741 No Hit ATATCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 2549 0.12673055066388114 No Hit CTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGCT 2413 0.11996893634835043 TruSeq Adapter, Index 27 (95% over 23bp) ATGGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 2312 0.11494744336402243 No Hit CCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 2238 0.1112683296923366 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13145373713428865 0.0 2 0.0 0.0 0.0 0.7065389782206414 0.0 3 0.0 0.0 0.0 0.9654690323036124 0.0 4 0.0 0.0 0.0 1.3106096689096003 0.0 5 0.0 0.0 0.0 2.6337979291561804 0.0 6 0.0 0.0 0.0 2.922906658897439 0.0 7 0.0 0.0 0.0 3.4032795818140418 0.0 8 0.0 0.0 0.0 4.811932658298837 0.0 9 0.0 0.0 0.0 4.987734630502636 0.0 10 0.0 0.0 0.0 5.3298424842170995 0.0 11 4.971775232007891E-5 0.0 0.0 5.5873804412351085 0.0 12 4.971775232007891E-5 0.0 0.0 6.289792846013183 0.0 13 4.971775232007891E-5 0.0 0.0 6.96232488164689 0.0 14 9.943550464015783E-5 0.0 0.0 7.243478771016937 0.0 15 1.4915325696023674E-4 0.0 0.0 7.39631114164886 0.0 16 1.4915325696023674E-4 0.0 0.0 7.510661971985041 0.0 17 1.4915325696023674E-4 0.0 0.0 7.64882760568254 0.0 18 1.4915325696023674E-4 0.0 0.0 7.964087873144161 0.0 19 1.4915325696023674E-4 0.0 0.0 8.33562863623211 0.0 20 1.4915325696023674E-4 0.0 0.0 8.74445771356012 0.0 21 1.4915325696023674E-4 0.0 0.0 9.011442043518944 0.0 22 1.4915325696023674E-4 0.0 0.0 9.327696666026965 0.0 23 1.4915325696023674E-4 0.0 0.0 9.769289742133905 0.0 24 1.4915325696023674E-4 0.0 0.0 10.161214783673088 0.0 25 1.4915325696023674E-4 0.0 0.0 10.574717329719185 0.0 26 2.983065139204735E-4 0.0 0.0 10.88684537878464 0.0 27 3.480242662405524E-4 0.0 0.0 11.171578946321732 0.0 28 3.480242662405524E-4 0.0 0.0 11.448457108992251 0.0 29 3.480242662405524E-4 0.0 0.0 11.776544556552452 0.0 30 3.480242662405524E-4 0.0 0.0 12.045020419080878 0.0 31 3.480242662405524E-4 0.0 0.0 12.376389238294204 0.0 32 3.480242662405524E-4 0.0 0.0 12.740024878763261 0.0 33 3.480242662405524E-4 0.0 0.0 13.05369417815064 0.0 34 3.977420185606313E-4 0.0 0.0 13.38894098204493 0.0 35 4.474597708807102E-4 0.0 0.0 13.714095082218247 0.0 36 4.474597708807102E-4 0.0 0.0 14.069925035573052 0.0 37 4.474597708807102E-4 0.0 0.0 14.461253464084393 0.0 38 4.474597708807102E-4 0.0 0.0 14.783772523384744 0.0 39 4.474597708807102E-4 0.0 0.0 15.128614853476812 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTA 40 6.8193913E-9 45.000004 29 CGAACGC 20 7.0345483E-4 45.000004 40 CGAACAG 20 7.0345483E-4 45.000004 43 AACGACT 30 2.1663182E-6 45.000004 1 TCGTATC 20 7.0345483E-4 45.000004 25 ACCGTAA 30 2.1663182E-6 45.000004 28 ACGACAC 20 7.0345483E-4 45.000004 30 CGTATCC 25 3.8918537E-5 45.0 41 CAACGAA 35 1.2125383E-7 45.0 41 CACGATC 35 1.2125383E-7 45.0 29 CGATTAC 35 1.2125383E-7 45.0 29 CCCGTAG 25 3.8918537E-5 45.0 32 CTACCGT 25 3.8918537E-5 45.0 17 CCGCGTA 25 3.8918537E-5 45.0 19 ATCGATC 70 0.0 45.0 1 CGGACTA 35 1.2125383E-7 45.0 40 TCGTAGA 65 0.0 44.999996 2 GCGATTA 130 0.0 43.26923 25 ATGCGAT 195 0.0 42.69231 1 GCCGTAA 65 0.0 41.53846 31 >>END_MODULE