##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545592_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1098396 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.90405463967458 31.0 31.0 34.0 31.0 34.0 2 32.604921175969324 34.0 31.0 34.0 31.0 34.0 3 32.5445540588276 34.0 31.0 34.0 31.0 34.0 4 36.00602605981813 37.0 35.0 37.0 35.0 37.0 5 35.753896591029104 37.0 35.0 37.0 35.0 37.0 6 35.7449335212437 37.0 35.0 37.0 35.0 37.0 7 35.73704110357285 37.0 35.0 37.0 33.0 37.0 8 35.698596863062136 37.0 35.0 37.0 33.0 37.0 9 37.911478191836096 39.0 38.0 39.0 35.0 39.0 10 37.87157546094487 39.0 38.0 39.0 35.0 39.0 11 37.6952228522318 39.0 38.0 39.0 35.0 39.0 12 37.215670850949934 39.0 37.0 39.0 33.0 39.0 13 36.92241778010845 39.0 37.0 39.0 33.0 39.0 14 37.41367138991766 39.0 35.0 41.0 33.0 41.0 15 37.197670967483496 39.0 35.0 41.0 32.0 41.0 16 37.25058448865437 39.0 35.0 41.0 32.0 41.0 17 37.3920389367769 39.0 35.0 41.0 32.0 41.0 18 37.513126413424665 39.0 35.0 41.0 33.0 41.0 19 37.48972319636998 39.0 35.0 41.0 33.0 41.0 20 37.448807169727495 39.0 35.0 41.0 33.0 41.0 21 37.4076435092626 39.0 35.0 41.0 32.0 41.0 22 37.33630220794686 39.0 35.0 41.0 32.0 41.0 23 37.23994078638305 39.0 35.0 41.0 32.0 41.0 24 37.22943728855531 39.0 35.0 41.0 32.0 41.0 25 37.21215026274677 39.0 35.0 41.0 32.0 41.0 26 37.10379043623611 39.0 35.0 41.0 32.0 41.0 27 37.0385425657049 39.0 35.0 41.0 32.0 41.0 28 36.931144141093014 39.0 35.0 41.0 32.0 41.0 29 36.87612937410552 39.0 35.0 41.0 31.0 41.0 30 36.850210670832745 39.0 35.0 41.0 31.0 41.0 31 36.77354706317212 38.0 35.0 41.0 31.0 41.0 32 36.68141271454011 38.0 35.0 41.0 31.0 41.0 33 36.57404888582988 38.0 35.0 41.0 31.0 41.0 34 36.47422696368159 38.0 35.0 41.0 31.0 41.0 35 36.381580959872394 38.0 35.0 41.0 30.0 41.0 36 36.29212870403752 38.0 35.0 41.0 30.0 41.0 37 36.16744598487249 38.0 35.0 41.0 30.0 41.0 38 36.11737752140394 38.0 35.0 40.0 30.0 41.0 39 36.089878331676374 38.0 35.0 40.0 30.0 41.0 40 36.032919821266645 38.0 35.0 40.0 30.0 41.0 41 35.97884642697169 38.0 35.0 40.0 30.0 41.0 42 35.84387597915506 38.0 35.0 40.0 30.0 41.0 43 35.71768014450162 38.0 35.0 40.0 29.0 41.0 44 35.69175870997345 38.0 35.0 40.0 29.0 41.0 45 35.69715020812166 38.0 35.0 40.0 30.0 41.0 46 35.64172029031424 37.0 35.0 40.0 29.0 41.0 47 35.53974887017068 37.0 34.0 40.0 29.0 41.0 48 35.508196497438085 37.0 34.0 40.0 29.0 41.0 49 35.47662591633618 37.0 34.0 40.0 29.0 41.0 50 35.39870228952036 37.0 34.0 40.0 29.0 41.0 51 35.2503951216137 36.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 4.0 11 5.0 12 2.0 13 6.0 14 16.0 15 18.0 16 50.0 17 99.0 18 247.0 19 483.0 20 897.0 21 1444.0 22 2215.0 23 3632.0 24 5394.0 25 7793.0 26 10709.0 27 12933.0 28 15148.0 29 17914.0 30 21699.0 31 27451.0 32 34697.0 33 44770.0 34 73785.0 35 160109.0 36 75610.0 37 101754.0 38 152763.0 39 326593.0 40 154.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 1.6317430143591198 91.66211457434295 2.9810742209549197 3.7250681903430096 2 3.477252284239928 2.209039362852742 91.28847883641237 3.025229516494962 3 26.224512835079516 16.709456334509596 44.58619659940495 12.47983423100594 4 26.258835611200332 15.470194720301238 44.51809729824217 13.752872370256263 5 24.764383701324476 14.189326982254125 46.43762358930659 14.608665727114811 6 21.99379822941817 14.243223755366916 49.221865338184045 14.54111267703087 7 22.889649998725414 17.466378246097037 44.91713371133908 14.72683804383847 8 24.21631178554911 18.306603447208474 44.69171409946868 12.785370667773735 9 80.71533399611798 3.984446410948328 10.293100120539405 5.007119472394291 10 82.11992760352368 3.930003386756689 10.003678090597562 3.9463909191220656 11 75.32920731685113 6.606269505715607 11.215171941631251 6.8493512358020245 12 44.68934701146034 23.21758272972589 16.51144031842796 15.581629940385799 13 37.409640967374244 23.362703433005947 24.413599466858944 14.81405613276086 14 32.404433373755914 25.175346596309527 24.57701958128034 17.84320044865422 15 21.273566181959875 32.376119359502404 29.67299589583356 16.677318562704162 16 15.671670326548895 37.2400300073926 28.5769431061293 18.511356559929208 17 14.743680785436217 24.99663145168045 42.266996602318294 17.99269116056504 18 18.043219385358285 22.279032334422194 40.4844882901977 19.19325999002181 19 18.17167943073354 21.392831000841227 29.966423767020274 30.46906580140496 20 20.355409160266426 23.909591804777147 33.16144632718983 22.5735527077666 21 25.76821110055026 25.188183496662408 28.83859737289648 20.20500802989086 22 28.46396017465468 23.337302757839616 26.33203325576568 21.86670381174003 23 22.99871813080164 27.601975972235877 28.572755181191482 20.826550715771 24 25.603698483971172 23.101868542857037 25.980884853914255 25.313548119257533 25 24.166602937374133 27.715778280328767 23.683534899981428 24.43408388231567 26 24.147484149614527 21.07773517019363 33.24793608134043 21.526844598851415 27 24.54324305623837 23.457751120725128 28.726342776193647 23.27266304684285 28 20.016642449535503 30.342153467419763 26.963772628450943 22.677431454593787 29 19.031660712529906 29.805097615067787 28.615544849034407 22.547696823367893 30 20.37680399418789 25.835855192480672 31.945127258293 21.842213555038438 31 17.9453494003984 26.39594463199065 31.54645501258198 24.11225095502897 32 19.992243234680387 27.958860010415187 31.35772526484073 20.69117149006369 33 25.02194108500031 26.011383872483147 24.517660297379088 24.449014745137454 34 26.385383777799625 26.759565766809057 25.952479797814267 20.902570657577048 35 26.481797093215924 27.32866834911999 24.767752249644026 21.421782308020056 36 22.097859059938312 25.63492583731186 26.350150583214067 25.91706451953576 37 20.013364943062427 24.379185648891657 29.69703094330278 25.910418464743135 38 24.794973761739847 27.827759751492177 24.006824496811717 23.370441989956266 39 22.154122921059436 29.734449142203722 26.30836237568236 21.80306556105448 40 22.397477776685275 27.743272917964013 28.257750392390356 21.601498912960356 41 20.740607212699246 29.130568574539602 25.911419925054354 24.2174042877068 42 25.671524659594535 24.4694081187477 26.88738851925899 22.97167870239877 43 20.243518730949496 24.34103911521892 27.869730042716835 27.54571211111475 44 19.710377677995915 26.279957319582376 26.069377528687287 27.940287473734426 45 20.521196362696152 23.17661389881245 28.405784434757592 27.896405303733808 46 22.91932964067604 25.48488887432219 28.13447973226414 23.46130175273763 47 19.456644051872 28.434371574550525 26.835676750461584 25.273307623115887 48 20.408304473068 28.24054348340671 25.512110386418012 25.83904165710727 49 21.369069078911433 26.1866394269462 28.746280940571523 23.698010553570846 50 21.198183533079145 22.959752220510634 31.533709154075577 24.30835509233464 51 21.184345172415046 22.164865858943404 29.109355824311084 27.541433144330462 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 681.0 1 896.5 2 1112.0 3 3287.5 4 5463.0 5 3695.0 6 1927.0 7 2000.0 8 2073.0 9 2256.5 10 2440.0 11 2556.5 12 2673.0 13 2664.0 14 2655.0 15 2865.5 16 3076.0 17 3355.0 18 3634.0 19 3588.0 20 3542.0 21 3882.0 22 4222.0 23 4818.0 24 5414.0 25 6412.0 26 8128.0 27 8846.0 28 11351.0 29 13856.0 30 15397.0 31 16938.0 32 20585.0 33 24232.0 34 29209.0 35 34186.0 36 38269.0 37 42352.0 38 52009.5 39 61667.0 40 73920.5 41 86174.0 42 91704.0 43 97234.0 44 105672.0 45 114110.0 46 120444.0 47 126778.0 48 114805.5 49 102833.0 50 88752.5 51 74672.0 52 62611.5 53 50551.0 54 47765.0 55 44979.0 56 44288.5 57 43598.0 58 40240.5 59 36883.0 60 32555.5 61 28228.0 62 22761.5 63 17295.0 64 13242.5 65 9190.0 66 8177.0 67 7164.0 68 6102.5 69 5041.0 70 3574.5 71 2108.0 72 1839.5 73 1571.0 74 1282.0 75 603.0 76 213.0 77 183.5 78 154.0 79 89.5 80 25.0 81 109.5 82 194.0 83 99.5 84 5.0 85 4.0 86 3.0 87 1.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1098396.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.716655865857366 #Duplication Level Percentage of deduplicated Percentage of total 1 69.71671544356285 11.654303401679437 2 12.122741379451533 4.053033915821606 3 5.426961730714295 2.721619549485857 4 2.974076940801634 1.988664829518511 5 1.8375757470506973 1.5359060695446136 6 1.145961347328629 1.1493984887320163 7 0.7870869770104979 0.9210223491827738 8 0.5563156085075525 0.743978926418063 9 0.4319672394189765 0.6498942918022302 >10 2.7077956430538297 9.272358563051297 >50 0.7199857317744445 8.86250028235102 >100 1.5514954493362358 51.733909817140635 >500 0.01257378271132256 1.3626812719524601 >1k 0.008200293072601669 2.7234434032228063 >5k 5.466862048401113E-4 0.6272848400966862 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 6864 0.6249112341996875 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3492 0.3179181278883026 No Hit ATCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTG 3003 0.2733986649623633 No Hit ATGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCT 2715 0.24717861317776102 No Hit CTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGCT 2433 0.22150481247200463 TruSeq Adapter, Index 16 (95% over 22bp) ATTGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 2214 0.20156664809413 No Hit ATGCCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 2064 0.18791037112298295 No Hit ATATCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 2027 0.18454182280343337 No Hit ATGTCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 1955 0.1779868098572828 No Hit ATGGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 1746 0.1589590639441513 No Hit CCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 1744 0.15877698025120265 TruSeq Adapter, Index 13 (95% over 21bp) ATAGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 1700 0.15477113900633285 No Hit ATTTCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 1478 0.1345598490890353 No Hit ATACCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 1181 0.10752042068616419 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.104184647431345E-5 0.0 0.0 0.23862067960917557 0.0 2 9.104184647431345E-5 0.0 0.0 1.1124403220696362 0.0 3 9.104184647431345E-5 0.0 0.0 1.5141169487143071 0.0 4 9.104184647431345E-5 0.0 0.0 2.0153023135554027 0.0 5 9.104184647431345E-5 0.0 0.0 3.914344189163107 0.0 6 9.104184647431345E-5 0.0 0.0 4.329495009085976 0.0 7 9.104184647431345E-5 0.0 0.0 5.028332222622806 0.0 8 9.104184647431345E-5 0.0 0.0 7.057199771302882 0.0 9 9.104184647431345E-5 0.0 0.0 7.317761535912367 0.0 10 9.104184647431345E-5 0.0 0.0 7.835425474965313 0.0 11 9.104184647431345E-5 0.0 0.0 8.23446188806223 0.0 12 9.104184647431345E-5 0.0 0.0 9.251945564259156 0.0 13 9.104184647431345E-5 0.0 0.0 10.170011544106133 0.0 14 9.104184647431345E-5 0.0 0.0 10.5688658735101 0.0 15 9.104184647431345E-5 0.0 0.0 10.77571294869974 0.0 16 1.820836929486269E-4 0.0 0.0 10.909999672249352 0.0 17 1.820836929486269E-4 0.0 0.0 11.087076063641893 0.0 18 2.731255394229404E-4 0.0 0.0 11.509328147589757 0.0 19 2.731255394229404E-4 0.0 0.0 12.055124017203267 0.0 20 2.731255394229404E-4 0.0 0.0 12.677303996008725 0.0 21 4.552092323715673E-4 0.0 0.0 13.077706036802756 0.0 22 4.552092323715673E-4 0.0 0.0 13.493221024111522 0.0 23 4.552092323715673E-4 0.0 0.0 14.136886878684919 0.0 24 4.552092323715673E-4 0.0 0.0 14.683502124916696 0.0 25 7.283347717945076E-4 0.0 0.0 15.25852242724846 0.0 26 8.19376618268821E-4 0.0 0.0 15.690333905076129 0.0 27 9.104184647431346E-4 0.0 0.0 16.077808003670807 0.0 28 0.0010014603112174479 0.0 0.0 16.42249243442256 0.0 29 0.0010014603112174479 0.0 0.0 16.772366250423346 0.0 30 0.0010014603112174479 0.0 0.0 17.1131358817767 0.0 31 0.0010014603112174479 0.0 0.0 17.481127025225874 0.0 32 0.0010014603112174479 0.0 0.0 17.87825155954683 0.0 33 0.0010014603112174479 0.0 0.0 18.285026529594063 0.0 34 0.0010925021576917615 0.0 0.0 18.663942694620154 0.0 35 0.0010925021576917615 0.0 0.0 19.02892945713568 0.0 36 0.0010925021576917615 0.0 0.0 19.396374349506008 0.0 37 0.0010925021576917615 0.0 0.0 19.850308996026932 0.0 38 0.0010925021576917615 0.0 0.0 20.235689132152704 0.0 39 0.0013656276971147018 0.0 0.0 20.657212881328775 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATA 35 1.2118653E-7 45.000004 38 CGGGTCG 25 3.8906917E-5 45.000004 3 AACGTAA 25 3.8906917E-5 45.000004 29 ACTATGC 25 3.8906917E-5 45.000004 20 TCGTTAC 35 1.2118653E-7 45.000004 2 ACCGGTA 25 3.8906917E-5 45.000004 2 TACCCGC 25 3.8906917E-5 45.000004 42 CGAACAG 25 3.8906917E-5 45.000004 3 TCACCGA 25 3.8906917E-5 45.000004 14 GTCGAGA 25 3.8906917E-5 45.000004 33 GTCGAAC 25 3.8906917E-5 45.000004 45 TTAGCGA 70 0.0 45.000004 2 CGTTGAA 35 1.2118653E-7 45.000004 41 GCTATGC 25 3.8906917E-5 45.000004 34 CCGGATC 35 1.2118653E-7 45.000004 40 CCGGATA 25 3.8906917E-5 45.000004 21 TCTTACG 25 3.8906917E-5 45.000004 15 CTCCCGT 25 3.8906917E-5 45.000004 15 GGTCCGT 50 2.1827873E-11 45.000004 10 CCGTGCA 25 3.8906917E-5 45.000004 42 >>END_MODULE