##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545586_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1477682 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.932729775418526 31.0 31.0 34.0 31.0 34.0 2 32.59523767630654 34.0 31.0 34.0 31.0 34.0 3 32.56006096034194 34.0 31.0 34.0 31.0 34.0 4 36.026318247092405 37.0 35.0 37.0 35.0 37.0 5 35.79987236766774 37.0 35.0 37.0 35.0 37.0 6 35.80239117753346 37.0 35.0 37.0 35.0 37.0 7 35.78744953244338 37.0 35.0 37.0 35.0 37.0 8 35.75934673360033 37.0 35.0 37.0 33.0 37.0 9 37.92129632762665 39.0 38.0 39.0 35.0 39.0 10 37.8848527626377 39.0 38.0 39.0 35.0 39.0 11 37.69520505765111 39.0 38.0 39.0 35.0 39.0 12 37.247635147480985 39.0 37.0 39.0 34.0 39.0 13 36.983736013567196 39.0 37.0 39.0 33.0 39.0 14 37.68201683447454 40.0 36.0 41.0 33.0 41.0 15 37.59003628656233 40.0 36.0 41.0 33.0 41.0 16 37.6319898327245 40.0 36.0 41.0 33.0 41.0 17 37.70445061928074 40.0 35.0 41.0 33.0 41.0 18 37.75327370841629 40.0 35.0 41.0 33.0 41.0 19 37.719162174270245 40.0 35.0 41.0 33.0 41.0 20 37.696482057709304 40.0 36.0 41.0 33.0 41.0 21 37.665531555503826 40.0 36.0 41.0 33.0 41.0 22 37.571731265590294 40.0 35.0 41.0 33.0 41.0 23 37.51768783811402 39.0 35.0 41.0 32.0 41.0 24 37.4795152136928 39.0 35.0 41.0 32.0 41.0 25 37.403152369725014 39.0 35.0 41.0 32.0 41.0 26 37.336155546321876 39.0 35.0 41.0 32.0 41.0 27 37.267879015918176 39.0 35.0 41.0 32.0 41.0 28 37.17432302755261 39.0 35.0 41.0 32.0 41.0 29 37.12300955144612 39.0 35.0 41.0 32.0 41.0 30 37.05465519644957 39.0 35.0 41.0 31.0 41.0 31 36.99355409350591 39.0 35.0 41.0 31.0 41.0 32 36.83562363214819 39.0 35.0 41.0 31.0 41.0 33 36.71450894035388 39.0 35.0 41.0 31.0 41.0 34 36.664559763196685 39.0 35.0 41.0 31.0 41.0 35 36.48139586189721 39.0 35.0 41.0 30.0 41.0 36 36.40122502676489 38.0 35.0 41.0 30.0 41.0 37 36.27459967706178 38.0 35.0 41.0 30.0 41.0 38 36.14878844027335 38.0 35.0 41.0 30.0 41.0 39 36.128937078478316 38.0 35.0 40.0 30.0 41.0 40 36.06758219968843 38.0 35.0 40.0 30.0 41.0 41 36.03817262442122 38.0 35.0 40.0 30.0 41.0 42 35.898118133671524 38.0 35.0 40.0 29.0 41.0 43 35.77950059620405 38.0 35.0 40.0 29.0 41.0 44 35.6833229341631 38.0 35.0 40.0 29.0 41.0 45 35.644702987516936 37.0 35.0 40.0 29.0 41.0 46 35.58135918282824 37.0 34.0 40.0 29.0 41.0 47 35.49822424581202 37.0 34.0 40.0 29.0 41.0 48 35.45531988614601 37.0 34.0 40.0 29.0 41.0 49 35.42083208701195 37.0 34.0 40.0 29.0 41.0 50 35.30244463964507 37.0 34.0 40.0 28.0 41.0 51 35.11521694112806 36.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 11.0 11 18.0 12 10.0 13 19.0 14 16.0 15 36.0 16 78.0 17 149.0 18 324.0 19 639.0 20 1251.0 21 2067.0 22 3248.0 23 4875.0 24 7070.0 25 10009.0 26 13616.0 27 16742.0 28 19936.0 29 24144.0 30 29031.0 31 36209.0 32 44686.0 33 57965.0 34 92943.0 35 181105.0 36 107408.0 37 150363.0 38 226878.0 39 446588.0 40 245.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.3268199788587802 91.09876143852331 3.346119124412424 3.2282994582054867 2 3.4883012718568676 2.248183303308831 91.13902720612418 3.124488218710115 3 26.74770349777557 16.0158274919773 43.43898078206272 13.797488228184413 4 26.728145839226574 15.112114785183822 44.227039376537036 13.93269999905257 5 23.42127737903013 14.093966090133058 47.55001414377383 14.934742387062979 6 21.84488949584552 15.037132481819498 47.72549168224287 15.392486340092118 7 21.66034370047141 16.886177134187193 46.205002158786534 15.248477006554861 8 25.69754520932109 18.797684481505495 43.53230261991416 11.972467689259258 9 82.36291705522568 4.209363042928045 8.950775606659619 4.47694429518665 10 83.66786629328908 4.094182645521838 8.423260214308627 3.8146908468804517 11 76.39749282998642 6.843353306056378 10.076795954745338 6.68235790921186 12 43.92535065054592 21.921428291066682 15.412314692877088 18.740906365510305 13 32.7251059429566 22.0736261252421 24.482669478277465 20.71859845352383 14 27.073551684327207 22.20004033344116 29.66091486530932 21.065493116922315 15 21.442773208308687 27.76652892841626 31.54115702837282 19.24954083490223 16 17.793747233843277 31.74877950736356 31.464347538915682 18.993125719877487 17 16.80943531828905 22.85660920279194 40.36775165428015 19.96620382463886 18 20.508066011496386 20.187970077459156 36.50338841509878 22.800575495945676 19 19.882965347077384 20.308158318230852 29.753153926216875 30.055722408474892 20 22.220207054021095 21.54787024542493 32.65262756127502 23.57929513927895 21 26.580617480621676 23.988043435597103 27.21011692637523 22.221222157405993 22 26.886434293711364 21.433840298521602 27.442507927957436 24.237217479809594 23 25.142689699136888 24.503445260888338 28.323482318929244 22.03038272104553 24 27.911079650425464 21.574262933432227 24.3924606241397 26.12219679200261 25 25.843787770305116 25.191008620257943 23.746178135755866 25.21902547368108 26 26.264040571652085 20.310932934149566 31.07299134725875 22.3520351469396 27 25.68874764665199 23.618951844848894 27.42017565348972 23.272124855009398 28 22.945329238631857 26.49555181696738 25.92127399535218 24.637844949048578 29 21.408327366781215 26.154003364729355 26.406967128245455 26.030702140243978 30 21.115774571254168 25.874579239646962 30.57667346560356 22.43297272349531 31 22.011501798086464 23.91637713662344 29.185372766265 24.886748299025093 32 22.664416295251616 27.83948102501079 27.885566718685073 21.610535961052513 33 25.395653462652994 28.731350858980488 24.217389127024624 21.6556065513419 34 28.484410042214765 24.509400534079727 24.984062876857134 22.022126546848376 35 25.25211784402869 26.4573162561363 24.393002012611646 23.897563887223367 36 24.366541651045353 25.42136941507036 25.45283762000214 24.759251313882146 37 23.651638173842546 25.112845659620948 28.0884520485463 23.147064117990205 38 26.171463142949563 26.401756264202987 26.034221165311617 21.39255942753583 39 25.777264661814925 27.62725674400852 25.97568353678261 20.619795057393944 40 22.88855112263667 26.773351776633948 27.939096503848592 22.399000596880793 41 23.126152988261346 28.651090018014703 23.847079412214537 24.375677581509418 42 25.685702336497297 23.280381029206552 27.073890052122174 23.960026582173974 43 22.60432217486577 23.765668120745868 27.227982745949397 26.402026958438963 44 23.12520555843544 25.033870616276033 25.183226160973742 26.65769766431478 45 21.21667584771284 23.60771803405604 28.346897370340844 26.82870874789028 46 22.38397706678433 24.694893759279736 28.45937082538733 24.461758348548603 47 21.34139821693707 27.38931651058888 26.263769877416117 25.005515395057937 48 21.395943105485483 26.6575623171968 25.873158094908106 26.07333648240961 49 22.88983692025754 24.26381318849387 29.07980201423581 23.76654787701278 50 22.642896103491818 23.427909387811454 30.153172333424916 23.77602217527181 51 21.44629223337633 24.07162028095355 28.629299132018932 25.852788353651192 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 464.0 1 876.5 2 1289.0 3 3709.5 4 6130.0 5 4191.0 6 2252.0 7 2374.0 8 2496.0 9 2524.0 10 2552.0 11 2721.5 12 2891.0 13 2844.0 14 2797.0 15 2804.0 16 2811.0 17 2780.5 18 2750.0 19 2610.5 20 2471.0 21 3439.5 22 4408.0 23 5157.5 24 5907.0 25 7724.0 26 12472.5 27 15404.0 28 16496.5 29 17589.0 30 21111.5 31 24634.0 32 28512.0 33 32390.0 34 39320.5 35 46251.0 36 53056.5 37 59862.0 38 64223.5 39 68585.0 40 81734.0 41 94883.0 42 108269.5 43 121656.0 44 133362.5 45 145069.0 46 141054.0 47 137039.0 48 121114.0 49 105189.0 50 95703.0 51 86217.0 52 85937.0 53 85657.0 54 78779.0 55 71901.0 56 74303.5 57 76706.0 58 74591.5 59 72477.0 60 63882.5 61 55288.0 62 46941.0 63 38594.0 64 32929.0 65 27264.0 66 22290.5 67 17317.0 68 14808.0 69 12299.0 70 9876.0 71 7453.0 72 5914.0 73 4375.0 74 3484.0 75 2014.5 76 1436.0 77 869.5 78 303.0 79 282.0 80 261.0 81 232.0 82 203.0 83 111.0 84 19.0 85 12.0 86 5.0 87 4.0 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1477682.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.008771110483778 #Duplication Level Percentage of deduplicated Percentage of total 1 71.58319328655442 11.459589566819686 2 11.594917974046863 3.71240775782701 3 4.871979494332885 2.3398321373923694 4 2.6082296573164334 1.6701820635021725 5 1.5299264440030915 1.2246121128960934 6 0.9470785789093072 0.909693851604081 7 0.6614758432991992 0.741259075934378 8 0.4618844223470315 0.5915361597481316 9 0.3402550580790659 0.49023588095749177 >10 2.642994407158166 9.1740101890643 >50 0.9425652606648145 11.162624055920443 >100 1.7972426786088025 52.521951105248576 >500 0.009340736812991648 0.9808732178628361 >1k 0.008491578920901499 2.5774175331826448 >5k 4.2457894604507496E-4 0.44377529203980715 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 6529 0.4418406666657644 TruSeq Adapter, Index 21 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3649 0.24694081676571822 No Hit GCCCTGCTAGAGGACTTGCGTCTGTATCTATGCTCTGCCCCATGCAGCTCC 3366 0.22778919957067895 No Hit ATCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTG 3153 0.2133747315051547 No Hit ATGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCT 2609 0.17656031541292375 No Hit ATTGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTC 2142 0.14495676336315932 No Hit CTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGCT 2081 0.14082867626458195 TruSeq Adapter, Index 21 (95% over 22bp) ATGTCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTC 2070 0.14008426711565816 No Hit CCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTCTGC 2021 0.13676826272499767 TruSeq Adapter, Index 15 (95% over 22bp) ATATCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTC 1980 0.13399364680628173 No Hit ATGCCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTC 1950 0.13196344003648958 No Hit ATAGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTC 1657 0.1121350872515196 No Hit ATGGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTTC 1625 0.10996953336374132 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1582 0.10705957032703924 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.154092693827224 0.0 2 0.0 0.0 0.0 0.8072778852283509 0.0 3 0.0 0.0 0.0 1.130757497215233 0.0 4 0.0 0.0 0.0 1.4923373229152146 0.0 5 0.0 0.0 0.0 2.877885769739362 0.0 6 0.0 0.0 0.0 3.1829581736801287 0.0 7 0.0 0.0 0.0 3.690645213246152 0.0 8 0.0 0.0 0.0 5.216954662775888 0.0 9 0.0 0.0 0.0 5.399334904262216 0.0 10 0.0 0.0 0.0 5.774584788878798 0.0 11 0.0 0.0 0.0 6.053264504812267 0.0 12 0.0 0.0 0.0 6.807757014026022 0.0 13 0.0 0.0 0.0 7.482936112099897 0.0 14 0.0 0.0 0.0 7.7692629401995825 0.0 15 1.3534711798614317E-4 0.0 0.0 7.919430567605208 0.0 16 1.3534711798614317E-4 0.0 0.0 8.022159030156692 0.0 17 1.3534711798614317E-4 0.0 0.0 8.151347854274466 0.0 18 1.3534711798614317E-4 0.0 0.0 8.467654069008082 0.0 19 1.3534711798614317E-4 0.0 0.0 8.90780289669902 0.0 20 1.3534711798614317E-4 0.0 0.0 9.392616273325384 0.0 21 3.3836779496535793E-4 0.0 0.0 9.693019201695629 0.0 22 4.7371491295150104E-4 0.0 0.0 10.059133155848146 0.0 23 5.413884719445727E-4 0.0 0.0 10.532509701004681 0.0 24 6.090620309376442E-4 0.0 0.0 10.948363721017106 0.0 25 6.767355899307159E-4 0.0 0.0 11.431485258668644 0.0 26 6.767355899307159E-4 0.0 0.0 11.778785963421088 0.0 27 6.767355899307159E-4 0.0 0.0 12.097460752719462 0.0 28 6.767355899307159E-4 0.0 0.0 12.38385525437814 0.0 29 7.444091489237874E-4 0.0 0.0 12.661046152013762 0.0 30 7.444091489237874E-4 0.0 0.0 12.984390416882658 0.0 31 7.444091489237874E-4 0.0 0.0 13.299343160436413 0.0 32 8.12082707916859E-4 0.0 0.0 13.63459797168809 0.0 33 8.12082707916859E-4 0.0 0.0 13.939399681392885 0.0 34 8.797562669099306E-4 0.0 0.0 14.251374788350944 0.0 35 8.797562669099306E-4 0.0 0.0 14.597660389718492 0.0 36 9.474298259030021E-4 0.0 0.0 14.916064484780893 0.0 37 9.474298259030021E-4 0.0 0.0 15.301939118159387 0.0 38 9.474298259030021E-4 0.0 0.0 15.629208449449882 0.0 39 0.0010151033848960736 0.0 0.0 15.94686813536336 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGT 35 1.2122473E-7 45.000004 33 AGCGTTC 65 0.0 45.000004 7 GTACCTA 20 7.0339406E-4 45.000004 35 CGACGTG 20 7.0339406E-4 45.000004 2 CGACGTC 20 7.0339406E-4 45.000004 41 CGAAACG 20 7.0339406E-4 45.000004 42 CGACGGT 35 1.2122473E-7 45.000004 30 CCGATCA 20 7.0339406E-4 45.000004 18 CGTGCAT 20 7.0339406E-4 45.000004 21 ACCGAAT 80 0.0 45.000004 2 AGGCGTA 20 7.0339406E-4 45.000004 14 TACGGGT 20 7.0339406E-4 45.000004 6 GCGCATT 20 7.0339406E-4 45.000004 31 ACGGGTA 20 7.0339406E-4 45.000004 7 AACGGTA 35 1.2122473E-7 45.000004 21 CTAACCG 35 1.2122473E-7 45.000004 19 CCGTAGA 35 1.2122473E-7 45.000004 25 CGCTCAT 40 6.8175723E-9 45.000004 27 TATTACG 35 1.2122473E-7 45.000004 15 GTATCGC 20 7.0339406E-4 45.000004 11 >>END_MODULE