##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545583_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1528056 Sequences flagged as poor quality 0 Sequence length 52 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.506171239797496 33.0 31.0 34.0 31.0 34.0 2 32.9356574628155 34.0 31.0 34.0 31.0 34.0 3 33.0311879931102 34.0 33.0 34.0 31.0 34.0 4 36.42036352070866 37.0 37.0 37.0 35.0 37.0 5 36.39696647243295 37.0 37.0 37.0 35.0 37.0 6 36.41470665996534 37.0 37.0 37.0 35.0 37.0 7 36.47300295277137 37.0 37.0 37.0 35.0 37.0 8 36.505368913181194 37.0 37.0 37.0 35.0 37.0 9 38.332246985712565 39.0 39.0 39.0 37.0 39.0 10 38.07132919212385 39.0 39.0 39.0 35.0 39.0 11 37.88342508389745 39.0 38.0 39.0 35.0 39.0 12 37.53901820352134 39.0 37.0 39.0 35.0 39.0 13 37.49369329396305 39.0 37.0 39.0 35.0 39.0 14 38.866164590826514 41.0 38.0 41.0 35.0 41.0 15 38.88674367955101 41.0 38.0 41.0 35.0 41.0 16 38.917147015554406 41.0 38.0 41.0 35.0 41.0 17 38.844773359091555 41.0 38.0 41.0 35.0 41.0 18 38.83206440078112 40.0 38.0 41.0 35.0 41.0 19 38.81173072191071 40.0 38.0 41.0 35.0 41.0 20 38.7314574858513 40.0 38.0 41.0 35.0 41.0 21 38.68653373960117 40.0 38.0 41.0 35.0 41.0 22 38.78289604569466 40.0 38.0 41.0 35.0 41.0 23 38.781100299989006 40.0 38.0 41.0 35.0 41.0 24 38.7131865586078 40.0 38.0 41.0 35.0 41.0 25 38.62786965922715 40.0 37.0 41.0 35.0 41.0 26 38.50400705209757 40.0 37.0 41.0 35.0 41.0 27 38.42072607286644 40.0 37.0 41.0 35.0 41.0 28 38.38025635186145 40.0 37.0 41.0 35.0 41.0 29 38.310044919819696 40.0 36.0 41.0 35.0 41.0 30 38.255885255514194 40.0 36.0 41.0 34.0 41.0 31 38.14966794410676 40.0 36.0 41.0 34.0 41.0 32 38.08780895464564 40.0 36.0 41.0 34.0 41.0 33 38.01669048778317 40.0 36.0 41.0 34.0 41.0 34 37.91286706769909 40.0 35.0 41.0 34.0 41.0 35 37.792179736868285 40.0 35.0 41.0 34.0 41.0 36 37.71246472642364 40.0 35.0 41.0 33.0 41.0 37 37.65479275628642 40.0 35.0 41.0 33.0 41.0 38 37.54692759951206 40.0 35.0 41.0 33.0 41.0 39 37.460849602370594 40.0 35.0 41.0 33.0 41.0 40 37.31725277084086 39.0 35.0 41.0 33.0 41.0 41 37.177649248456866 39.0 35.0 41.0 33.0 41.0 42 37.07510981272937 39.0 35.0 41.0 33.0 41.0 43 36.98000335066254 39.0 35.0 41.0 33.0 41.0 44 36.8541584863382 39.0 35.0 41.0 32.0 41.0 45 36.77153062453208 39.0 35.0 41.0 32.0 41.0 46 36.73263807085604 38.0 35.0 41.0 32.0 41.0 47 36.69117034977776 38.0 35.0 41.0 32.0 41.0 48 36.573101378483514 38.0 35.0 40.0 32.0 41.0 49 36.47356903150146 38.0 35.0 40.0 32.0 41.0 50 36.38034797154031 38.0 35.0 40.0 32.0 41.0 51 36.277544802022966 37.0 35.0 40.0 32.0 41.0 52 35.93068644081107 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 3.0 11 4.0 12 9.0 13 32.0 14 27.0 15 60.0 16 79.0 17 157.0 18 277.0 19 505.0 20 878.0 21 1308.0 22 1953.0 23 2654.0 24 3661.0 25 4738.0 26 5918.0 27 7487.0 28 9415.0 29 12071.0 30 15451.0 31 19779.0 32 26187.0 33 36535.0 34 82296.0 35 160779.0 36 101902.0 37 144365.0 38 236721.0 39 651766.0 40 1036.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.34712863926453 13.71703654839875 45.86081923699131 12.075015575345406 2 25.72569329919846 12.753328412047725 49.42109451486071 12.099883773893104 3 26.107420146905614 14.19038307496584 45.139183380713796 14.563013397414753 4 23.18272366981315 14.275393048422307 46.991340631495184 15.55054265026936 5 22.42790840126278 17.46100928238232 44.42985073845461 15.681231577900286 6 26.144591559471642 19.833042768066093 42.779060453281815 11.24330521918045 7 88.29323009104378 2.720319150607046 5.4095530530294695 3.5768977053197 8 89.16296261393562 2.7513389561639103 5.402288921348433 2.6834095085520424 9 82.2698906322805 4.33753736774045 7.139201704649569 6.253370295329491 10 46.309428450266225 22.728028292156832 12.993306528033004 17.969236729543944 11 35.25453255639845 23.626097472867485 21.946185218342784 19.173184752391272 12 29.177530142874346 23.17480511185454 26.376520232242797 21.271144513028318 13 23.86725355615239 24.742156046637035 30.804957409937856 20.585632987272717 14 20.30638929463318 29.649633259514047 29.172621945792564 20.871355500060208 15 19.448109231598842 22.009010140989595 36.182247247483076 22.360633379928487 16 23.929685823032663 20.905909207515954 32.37937614851812 22.785028820933263 17 23.743632432319234 21.450195542571738 27.41915217766888 27.387019847440147 18 24.310300146067945 21.598619422324834 29.44525593302863 24.645824498578587 19 27.832226044071685 24.334448475710314 25.489314527739822 22.344010952478182 20 29.077730135544773 21.774790976246944 24.766893359929217 24.38058552827907 21 27.22014114665955 24.510358259121393 25.323941007397632 22.945559586821425 22 29.67351981864539 21.24614542922511 24.02582104320784 25.05451370892166 23 29.416853832582053 23.190053244121945 22.38595967687048 25.00713324642552 24 28.50111514237698 19.529650745784185 27.29585826697451 24.673375844864324 25 29.97076023391813 22.144149167308004 23.23906977231201 24.646020826461857 26 25.028009444680038 26.32547498259226 22.678095567178165 25.968420005549536 27 24.21501568005361 24.909689173695206 24.21972754925212 26.655567596999063 28 24.662774139167677 23.771772762254788 26.30008324302251 25.26536985555503 29 24.016200976927546 23.512489071081163 24.67547000895255 27.795839943038736 30 24.866758809886548 27.332048040124185 23.872816179511748 23.928376970477522 31 27.626997963425424 26.255451370892168 22.324116393640022 23.793434272042386 32 29.790923892841626 24.040938290219728 21.134565748899256 25.03357206803939 33 27.65913029365416 26.48175197767621 21.772696812158717 24.086420916510914 34 25.8311868151429 25.91240111618946 23.229187935520688 25.02722413314695 35 26.46447512394834 24.158276921788207 25.426293277209737 23.95095467705372 36 26.581682870261297 26.541370211562924 21.47944839717916 25.397498520996614 37 28.444703597250363 27.04279162543781 22.527053982314786 21.985450794997043 38 24.768725753506416 26.076204013465475 24.509507504960553 24.645562728067556 39 26.1667766102813 27.33211348275194 22.175561628631414 24.325548278335347 40 26.647583596412698 23.239462428078554 25.588852764558368 24.524101210950384 41 23.952983398514192 24.057887930808818 24.991754228902604 26.997374441774387 42 24.942083274434967 24.984359211966055 22.780382394362512 27.29317511923647 43 23.926217363761538 22.559448083054548 26.039883355060283 27.474451198123628 44 27.137159894663547 23.21387436062553 23.372638175564248 26.27632756914668 45 23.766406466778704 25.11478636908595 24.042378028030388 27.076429136104956 46 24.822454150894995 24.597789609804877 23.353528928259173 27.226227311040958 47 25.336047893532697 23.96607192406561 26.237323763003452 24.46055641939824 48 23.94009120084604 22.008617485223056 28.4376357934526 25.613655520478307 49 23.927002675294624 23.228926165009657 25.621443193181403 27.222627966514317 50 23.2163611804803 23.716342856544525 27.165365667226855 25.901930295748322 51 24.3126560806672 23.816470077012887 25.57216489448031 26.298708947839604 52 24.44367222143691 22.417699351332672 26.264286125639373 26.874342301591042 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 106.0 1 93.0 2 80.0 3 87.5 4 95.0 5 96.5 6 98.0 7 197.0 8 296.0 9 382.0 10 468.0 11 596.5 12 725.0 13 934.0 14 1099.0 15 1055.0 16 983.5 17 912.0 18 883.5 19 855.0 20 1527.0 21 2199.0 22 2239.5 23 2280.0 24 2744.0 25 3208.0 26 4341.0 27 5474.0 28 6609.0 29 7744.0 30 11361.5 31 14979.0 32 17287.0 33 19595.0 34 21970.0 35 24345.0 36 24916.0 37 25487.0 38 30202.5 39 45188.5 40 55459.0 41 61785.5 42 68112.0 43 77209.0 44 86306.0 45 87156.0 46 88006.0 47 98869.0 48 109732.0 49 122840.0 50 135948.0 51 139823.0 52 143698.0 53 130713.0 54 117728.0 55 112021.5 56 106315.0 57 101466.5 58 96618.0 59 93968.0 60 91318.0 61 85343.5 62 79369.0 63 70154.5 64 54004.5 65 47069.0 66 38296.5 67 29524.0 68 26340.5 69 23157.0 70 18646.5 71 14136.0 72 12320.0 73 10504.0 74 9153.0 75 7802.0 76 5878.5 77 3955.0 78 3884.5 79 3814.0 80 2760.0 81 1706.0 82 1026.0 83 346.0 84 290.5 85 235.0 86 151.5 87 68.0 88 65.5 89 41.0 90 19.0 91 18.0 92 17.0 93 17.0 94 17.0 95 10.5 96 4.0 97 5.0 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1528056.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.870143351467544 #Duplication Level Percentage of deduplicated Percentage of total 1 70.3231699608924 11.86361958169871 2 11.903391711950967 4.016238490985669 3 4.813381373999781 2.436073013539804 4 2.4417664070385694 1.6477179727015407 5 1.409229541176246 1.1886952187383055 6 0.8900915061397775 0.9009582782701021 7 0.6687729464754594 0.7897606833637031 8 0.45966754809010696 0.6203725944238164 9 0.3510914461814133 0.5330666723899046 >10 3.44645619492844 13.975011252477076 >50 1.6812907664532237 20.658932381756443 >100 1.6031363884403682 38.957137805883015 >500 0.0038882764696589033 0.45149576360529275 >1k 0.0046659317635906845 1.9609202901665874 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGCTT 4964 0.32485720418623404 Illumina Single End Adapter 1 (95% over 21bp) GTCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC 3575 0.23395739423162504 No Hit GCCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC 3526 0.2307507054715272 No Hit GCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGCT 3058 0.2001235556812054 No Hit TGCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC 2802 0.18337024297538834 No Hit TTCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC 2590 0.16949640589088358 No Hit ATCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC 2228 0.14580617464281415 No Hit AGCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC 1775 0.11616066426884879 No Hit GGCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC 1575 0.10307213871742921 No Hit ACCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC 1529 0.1000617778406027 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.33997445119812364 0.0 2 0.0 0.0 0.0 0.7133900851801243 0.0 3 0.0 0.0 0.0 2.325961875742774 0.0 4 0.0 0.0 0.0 2.6619443266477143 0.0 5 0.0 0.0 0.0 3.296017946986236 0.0 6 0.0 0.0 0.0 5.128935065207035 0.0 7 0.0 0.0 0.0 5.352814294764066 0.0 8 0.0 0.0 0.0 5.792392425408493 0.0 9 6.54426277570979E-5 0.0 0.0 6.079554676006638 0.0 10 6.54426277570979E-5 0.0 0.0 7.172446559550173 0.0 11 1.308852555141958E-4 0.0 0.0 8.098917840707408 0.0 12 1.308852555141958E-4 0.0 0.0 8.47999026213699 0.0 13 1.308852555141958E-4 0.0 0.0 8.684433031250164 0.0 14 1.308852555141958E-4 0.0 0.0 8.78776694047862 0.0 15 1.308852555141958E-4 0.0 0.0 8.964920133817085 0.0 16 1.308852555141958E-4 0.0 0.0 9.360717146492014 0.0 17 1.308852555141958E-4 0.0 0.0 9.8792190862115 0.0 18 1.308852555141958E-4 0.0 0.0 10.457666472956488 0.0 19 1.308852555141958E-4 0.0 0.0 10.820153188103054 0.0 20 1.308852555141958E-4 0.0 0.0 11.223999643992105 0.0 21 1.308852555141958E-4 0.0 0.0 11.833924934688257 0.0 22 1.308852555141958E-4 0.0 0.0 12.360476317621867 0.0 23 1.308852555141958E-4 0.0 0.0 12.945926065536865 0.0 24 1.308852555141958E-4 0.0 0.0 13.397022098666541 0.0 25 1.9632788327129372E-4 0.0 0.0 13.797334652656708 0.0 26 1.9632788327129372E-4 0.0 0.0 14.143984251886057 0.0 27 1.9632788327129372E-4 0.0 0.0 14.47381509578183 0.0 28 1.9632788327129372E-4 0.0 0.0 14.819744826105849 0.0 29 1.9632788327129372E-4 0.0 0.0 15.17850131147026 0.0 30 1.9632788327129372E-4 0.0 0.0 15.564220159470596 0.0 31 2.617705110283916E-4 0.0 0.0 15.937374022941567 0.0 32 2.617705110283916E-4 0.0 0.0 16.29586873779495 0.0 33 2.617705110283916E-4 0.0 0.0 16.659533420241143 0.0 34 2.617705110283916E-4 0.0 0.0 17.021627479621166 0.0 35 2.617705110283916E-4 0.0 0.0 17.432018198285927 0.0 36 2.617705110283916E-4 0.0 0.0 17.805499274895684 0.0 37 2.617705110283916E-4 0.0 0.0 18.183692220703954 0.0 38 2.617705110283916E-4 0.0 0.0 18.549385624610615 0.0 39 2.617705110283916E-4 0.0 0.0 18.941256079620118 0.0 40 2.617705110283916E-4 0.0 0.0 19.350665158868523 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGGACG 35 1.019871E-7 46.000004 27 TCGTATC 35 1.019871E-7 46.000004 12 TCGTAAT 35 1.019871E-7 46.000004 32 CGTAATC 35 1.019871E-7 46.000004 33 AGCGTAC 20 6.3121103E-4 46.0 20 CATGCGT 25 3.417689E-5 46.0 18 TAACGTA 20 6.3121103E-4 46.0 46 CGATTAG 25 3.417689E-5 46.0 1 TTATCGC 20 6.3121103E-4 46.0 26 GTATCGA 20 6.3121103E-4 46.0 14 TCCCGTA 20 6.3121103E-4 46.0 20 TTACGAC 20 6.3121103E-4 46.0 37 TTACCGG 45 3.110472E-10 46.0 2 TTCGATC 25 3.417689E-5 46.0 21 AATACGC 25 3.417689E-5 46.0 35 AATACCC 20 6.3121103E-4 46.0 39 ATCGCAA 20 6.3121103E-4 46.0 28 GCGTACA 25 3.417689E-5 46.0 32 ACGAATC 20 6.3121103E-4 46.0 34 ACGCGTT 20 6.3121103E-4 46.0 41 >>END_MODULE