##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545580_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1276608 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.897801047776607 31.0 31.0 34.0 31.0 34.0 2 32.55400169825036 34.0 31.0 34.0 31.0 34.0 3 32.52224410312328 34.0 31.0 34.0 31.0 34.0 4 36.010683780769035 37.0 35.0 37.0 35.0 37.0 5 35.77274073168898 37.0 35.0 37.0 35.0 37.0 6 35.77640747982153 37.0 35.0 37.0 35.0 37.0 7 35.764959956384416 37.0 35.0 37.0 35.0 37.0 8 35.73731090514865 37.0 35.0 37.0 33.0 37.0 9 37.893569521732594 39.0 38.0 39.0 35.0 39.0 10 37.837369027924 39.0 38.0 39.0 35.0 39.0 11 37.68472076001404 39.0 38.0 39.0 35.0 39.0 12 37.20209727653281 39.0 37.0 39.0 33.0 39.0 13 36.86878744297388 39.0 37.0 39.0 33.0 39.0 14 37.50651100416103 39.0 35.0 41.0 33.0 41.0 15 37.342697993432594 40.0 35.0 41.0 32.0 41.0 16 37.39021297062215 40.0 35.0 41.0 32.0 41.0 17 37.46282570687321 40.0 35.0 41.0 32.0 41.0 18 37.526998107484836 39.0 35.0 41.0 33.0 41.0 19 37.47331757281797 39.0 35.0 41.0 32.0 41.0 20 37.428944515465986 39.0 35.0 41.0 32.0 41.0 21 37.40279239985963 39.0 35.0 41.0 32.0 41.0 22 37.33983885421367 39.0 35.0 41.0 32.0 41.0 23 37.26058038176167 39.0 35.0 41.0 32.0 41.0 24 37.211207355742715 39.0 35.0 41.0 32.0 41.0 25 37.15483923021006 39.0 35.0 41.0 32.0 41.0 26 37.05304682408382 39.0 35.0 41.0 32.0 41.0 27 36.972663495763776 39.0 35.0 41.0 32.0 41.0 28 36.874536271118465 39.0 35.0 41.0 31.0 41.0 29 36.806263159873666 39.0 35.0 41.0 31.0 41.0 30 36.75292415526144 39.0 35.0 41.0 31.0 41.0 31 36.68374003609566 38.0 35.0 41.0 31.0 41.0 32 36.563304475610366 38.0 35.0 41.0 31.0 41.0 33 36.46539893217025 38.0 35.0 41.0 31.0 41.0 34 36.346912286308715 38.0 35.0 41.0 30.0 41.0 35 36.25337926755903 38.0 35.0 41.0 30.0 41.0 36 36.149412348974785 38.0 35.0 41.0 30.0 41.0 37 36.03154609715747 38.0 35.0 40.0 30.0 41.0 38 35.95775993883792 38.0 35.0 40.0 30.0 41.0 39 35.89305331002156 38.0 35.0 40.0 30.0 41.0 40 35.80065141374643 38.0 35.0 40.0 30.0 41.0 41 35.71463988945706 37.0 35.0 40.0 29.0 41.0 42 35.58680581666416 37.0 34.0 40.0 29.0 41.0 43 35.47218645034341 37.0 34.0 40.0 29.0 41.0 44 35.379926336040505 37.0 34.0 40.0 29.0 41.0 45 35.316863908106484 37.0 34.0 40.0 28.0 41.0 46 35.236237748784276 36.0 34.0 40.0 28.0 41.0 47 35.160280211309974 36.0 34.0 40.0 28.0 41.0 48 35.10583280067178 36.0 34.0 40.0 28.0 41.0 49 35.06663987692385 36.0 34.0 40.0 28.0 41.0 50 34.96962497493357 36.0 34.0 40.0 28.0 41.0 51 34.78931747255226 36.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 4.0 10 6.0 11 15.0 12 26.0 13 26.0 14 33.0 15 40.0 16 79.0 17 187.0 18 396.0 19 716.0 20 1327.0 21 2102.0 22 3337.0 23 4705.0 24 6740.0 25 9487.0 26 12894.0 27 15670.0 28 18361.0 29 22199.0 30 26475.0 31 32622.0 32 40259.0 33 52673.0 34 88119.0 35 172984.0 36 96817.0 37 129090.0 38 189063.0 39 350012.0 40 142.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.0642985160675793 91.3285049130195 3.349422845540683 3.2577737253722363 2 3.3767609164285353 2.6909591667919988 91.07008572717702 2.8621941896024463 3 27.48110618138066 15.93543201985261 43.241778212262496 13.341683586504235 4 27.2681198927157 16.187036271118462 43.26731463377951 13.277529202386324 5 25.01245488043315 13.73632313129794 46.274110768536616 14.97711121973229 6 22.97126447586103 14.596258209254525 47.03158683009976 15.400890484784679 7 23.248013485737204 17.168543515315587 44.849476111696 14.733966887251215 8 26.49403732390836 19.288693161878978 42.03193149345766 12.185338020755001 9 82.48044818769739 4.408714343008974 9.034018273424575 4.076819195869053 10 83.6038940692836 4.517909961397704 8.464775404822781 3.4134205644959144 11 77.87300408582745 6.16923910863789 9.633262520679802 6.324494284854866 12 46.86450343410037 20.198291096405473 16.01047463277686 16.9267308367173 13 36.3023731638843 23.35344914022159 22.439072918233318 17.905104777660803 14 31.36890885847496 22.275592820975586 25.744472853060614 20.611025467488844 15 22.299405925703113 26.650859151752144 30.340558730636186 20.709176191908558 16 18.88880533413546 32.01248934676894 30.03498333082669 19.06372198826891 17 18.594509826039005 22.661459116659145 39.57369842582845 19.170332631473403 18 22.34319383867248 20.25437722464531 36.45042174261794 20.952007194064272 19 22.129502556775453 20.712622825487543 28.33743796059558 28.820436657141425 20 24.11954178573219 21.43437922995939 32.24513711335038 22.200941870958037 21 27.858042562791397 23.541134005113552 27.18618401263348 21.414639419461572 22 29.00381323005966 22.048036672181283 25.87763824133955 23.07051185641951 23 26.42627964104878 23.94376347320399 27.223861984258285 22.406094901488945 24 29.082694139469595 20.551571038251364 25.586241038752693 24.779493783526345 25 26.624069408933675 23.73649546297689 24.304250012533213 25.335185115556225 26 26.666604000601595 20.693274677896426 29.76935754750088 22.8707637740011 27 27.626569784930066 21.36309658093949 27.45940805634933 23.550925577781122 28 23.184015766781975 26.14396901789743 26.42048303002958 24.251532185291023 29 22.123940943500276 26.621876096656138 26.762169749837067 24.492013210006515 30 21.991480548453403 24.83260327367524 30.254079560836217 22.921836617035144 31 23.286396450594076 23.398882037399108 29.24343259638041 24.07128891562641 32 23.601450092745775 25.67099689176317 27.673491001153057 23.054062014337994 33 27.28942635484033 23.95480836717301 25.016293176918836 23.73947210106783 34 29.240142627964104 23.85023437108337 25.825782072492103 21.083840928460422 35 26.774467965107533 23.583355266456106 25.878343234571616 23.76383353386474 36 23.737670451696996 24.368091066325764 27.112159723266654 24.782078758710583 37 24.073012232415902 24.589615606356848 28.40096568406277 22.936406477164486 38 26.825070812653536 25.921974482378303 24.01998107484835 23.23297363011982 39 26.696370381511002 26.241179751341054 25.647497117361006 21.414952749786938 40 24.458565197774103 26.536180252669574 26.440379505690082 22.564875043866245 41 24.38618589261543 26.16175051386173 25.13590702862586 24.316156564896975 42 26.42103135809896 23.14249949867148 26.50711886499223 23.92935027823733 43 23.258275053892817 23.001970847746527 27.224488644909005 26.515265453451647 44 24.621026971474407 24.570972451997793 24.119855116057554 26.688145460470245 45 22.589393141825838 23.096283275680555 26.97076941394696 27.343554168546646 46 24.872161227252217 23.07035519125683 27.38930039604953 24.66818318544142 47 22.100441169098108 25.81230886850153 26.827734120419112 25.25951584198125 48 22.942359753346366 25.612795783827142 25.903331328019252 25.541513134807236 49 23.533379079560838 23.87138416804532 28.282761818819875 24.31247493357397 50 23.79038827893919 21.391922970872812 30.859277084273323 23.958411665914674 51 23.064950243144335 22.611561262345216 28.517524565097506 25.805963929412947 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 587.0 1 1229.5 2 1872.0 3 3777.5 4 5683.0 5 4139.5 6 2596.0 7 2453.5 8 2311.0 9 2430.0 10 2549.0 11 2863.5 12 3178.0 13 3189.0 14 3200.0 15 2979.5 16 2759.0 17 3022.0 18 3285.0 19 3205.0 20 3125.0 21 3744.5 22 4364.0 23 4839.0 24 5314.0 25 6267.0 26 8412.0 27 9604.0 28 11337.5 29 13071.0 30 15230.0 31 17389.0 32 18492.5 33 19596.0 34 25055.5 35 30515.0 36 32445.5 37 34376.0 38 46036.0 39 57696.0 40 68137.5 41 78579.0 42 86173.0 43 93767.0 44 100166.0 45 106565.0 46 114151.0 47 121737.0 48 112051.5 49 102366.0 50 91014.0 51 79662.0 52 77034.5 53 74407.0 54 73788.0 55 73169.0 56 73182.5 57 73196.0 58 68618.5 59 64041.0 60 58619.0 61 53197.0 62 47648.0 63 42099.0 64 36551.0 65 31003.0 66 25260.5 67 19518.0 68 16201.5 69 12885.0 70 10680.5 71 8476.0 72 7124.0 73 5772.0 74 4631.5 75 2439.0 76 1387.0 77 1023.0 78 659.0 79 437.0 80 215.0 81 127.0 82 39.0 83 30.0 84 21.0 85 17.5 86 14.0 87 29.5 88 45.0 89 25.5 90 6.0 91 4.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1276608.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.22198171263331 #Duplication Level Percentage of deduplicated Percentage of total 1 73.07659036875343 11.854471125835135 2 10.957556170732184 3.5550655163353944 3 4.578446416334043 2.22814422114127 4 2.417334149829089 1.5685580148740583 5 1.3985005475730237 1.1343225153918628 6 0.8648506268864773 0.8417754632107132 7 0.5708344012871309 0.6482045653035275 8 0.39516432177746513 0.5128278721087345 9 0.28210493149489996 0.41186709357785445 >10 2.4522220851629934 9.068321339645724 >50 1.1422948310101606 13.752096838336335 >100 1.850052569812529 51.57352618017488 >500 0.006782072788000891 0.7451406722452161 >1k 0.0072665065585723835 2.1056785818192965 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC 4348 0.34059006366872213 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3089 0.24196934376096657 No Hit ATCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG 2511 0.19669311174612725 No Hit ATGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCT 1967 0.1540801874968667 No Hit ATGCCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTC 1603 0.12556712788890562 No Hit CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGCT 1586 0.1242354740061162 No Hit CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC 1490 0.11671554619742316 No Hit ATTGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTC 1461 0.11444390133854715 No Hit ATGGGGGGCATCATCTGTCCTTATAGCTCATTAGGAAGAGAAACAGTGTTG 1434 0.11232892164235223 No Hit ATATCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTC 1408 0.11029227452749787 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.833258134055246E-5 0.0 0.0 0.13308705569759863 0.0 2 7.833258134055246E-5 0.0 0.0 0.6378622098561187 0.0 3 7.833258134055246E-5 0.0 0.0 0.9294944101869955 0.0 4 7.833258134055246E-5 0.0 0.0 1.2516763172406877 0.0 5 7.833258134055246E-5 0.0 0.0 2.355930716398456 0.0 6 7.833258134055246E-5 0.0 0.0 2.6108249360806135 0.0 7 1.5666516268110492E-4 0.0 0.0 3.044552438963253 0.0 8 1.5666516268110492E-4 0.0 0.0 4.342209981450845 0.0 9 1.5666516268110492E-4 0.0 0.0 4.513445004261293 0.0 10 1.5666516268110492E-4 0.0 0.0 4.835705243896325 0.0 11 1.5666516268110492E-4 0.0 0.0 5.092479445530656 0.0 12 1.5666516268110492E-4 0.0 0.0 5.798725998897077 0.0 13 1.5666516268110492E-4 0.0 0.0 6.398988569709731 0.0 14 1.5666516268110492E-4 0.0 0.0 6.6458145335138115 0.0 15 1.5666516268110492E-4 0.0 0.0 6.78031157567554 0.0 16 1.5666516268110492E-4 0.0 0.0 6.866947410638192 0.0 17 1.5666516268110492E-4 0.0 0.0 6.994472853060611 0.0 18 1.5666516268110492E-4 0.0 0.0 7.271535193262145 0.0 19 1.5666516268110492E-4 0.0 0.0 7.611811926605505 0.0 20 1.5666516268110492E-4 0.0 0.0 8.020316338296485 0.0 21 1.5666516268110492E-4 0.0 0.0 8.272233919887702 0.0 22 1.5666516268110492E-4 0.0 0.0 8.55987115857021 0.0 23 2.3499774402165738E-4 0.0 0.0 8.980752118113 0.0 24 8.616583947460771E-4 0.0 0.0 9.342021983255627 0.0 25 9.399909760866295E-4 0.0 0.0 9.721621672431946 0.0 26 0.0010966561387677344 0.0 0.0 10.019520479270065 0.0 27 0.0010966561387677344 0.0 0.0 10.285616258083923 0.0 28 0.0010966561387677344 0.0 0.0 10.535732190304307 0.0 29 0.0010966561387677344 0.0 0.0 10.752478442873615 0.0 30 0.0010966561387677344 0.0 0.0 10.985987867849802 0.0 31 0.0011749887201082869 0.0 0.0 11.241195417857321 0.0 32 0.0011749887201082869 0.0 0.0 11.52710933975034 0.0 33 0.0011749887201082869 0.0 0.0 11.800333383466185 0.0 34 0.0012533213014488394 0.0 0.0 12.0717557778112 0.0 35 0.0012533213014488394 0.0 0.0 12.352734747079761 0.0 36 0.0012533213014488394 0.0 0.0 12.619065523637639 0.0 37 0.0012533213014488394 0.0 0.0 12.92683423572467 0.0 38 0.0012533213014488394 0.0 0.0 13.222226399959894 0.0 39 0.0012533213014488394 0.0 0.0 13.509785306061062 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACA 20 7.03358E-4 45.000004 24 TTCGTAA 90 0.0 45.000004 2 CGATTAG 20 7.03358E-4 45.000004 44 CGTTCAC 20 7.03358E-4 45.000004 42 CCCACGT 20 7.03358E-4 45.000004 34 ATCGTAG 80 0.0 45.000004 1 CGTTAGC 20 7.03358E-4 45.000004 43 TACGCTA 20 7.03358E-4 45.000004 41 TCTACGA 20 7.03358E-4 45.000004 27 GAACGCT 20 7.03358E-4 45.000004 24 TTACGTA 45 3.8562575E-10 45.000004 2 CCGAATC 20 7.03358E-4 45.000004 40 ACCCGGT 20 7.03358E-4 45.000004 22 ACCCGAT 20 7.03358E-4 45.000004 34 CACGTTA 20 7.03358E-4 45.000004 41 TATACGG 75 0.0 45.000004 4 CGATCAA 20 7.03358E-4 45.000004 44 CGATAGA 45 3.8562575E-10 45.000004 13 ATCGCGA 125 0.0 45.000004 1 AGTACGA 45 3.8562575E-10 45.000004 28 >>END_MODULE