##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545576_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2226422 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.89741253005944 31.0 31.0 34.0 31.0 34.0 2 32.55181138166978 34.0 31.0 34.0 31.0 34.0 3 32.526555163396694 34.0 31.0 34.0 31.0 34.0 4 36.00634291252961 37.0 35.0 37.0 35.0 37.0 5 35.786134883683324 37.0 35.0 37.0 35.0 37.0 6 35.79345020845105 37.0 35.0 37.0 35.0 37.0 7 35.77465772436672 37.0 35.0 37.0 35.0 37.0 8 35.750372121727146 37.0 35.0 37.0 33.0 37.0 9 37.91510998364191 39.0 38.0 39.0 35.0 39.0 10 37.86095807533343 39.0 38.0 39.0 35.0 39.0 11 37.685923423322265 39.0 38.0 39.0 35.0 39.0 12 37.21012817875497 39.0 37.0 39.0 33.0 39.0 13 36.98613874638321 39.0 37.0 39.0 33.0 39.0 14 37.80444183537532 40.0 36.0 41.0 33.0 41.0 15 37.766621961155614 40.0 36.0 41.0 33.0 41.0 16 37.801604996716705 40.0 36.0 41.0 33.0 41.0 17 37.84947058554039 40.0 36.0 41.0 33.0 41.0 18 37.86384881212996 40.0 36.0 41.0 33.0 41.0 19 37.810463604833224 40.0 36.0 41.0 33.0 41.0 20 37.76555522717616 40.0 36.0 41.0 33.0 41.0 21 37.74957712419299 40.0 36.0 41.0 33.0 41.0 22 37.682450586636314 40.0 35.0 41.0 33.0 41.0 23 37.634939827220535 40.0 35.0 41.0 33.0 41.0 24 37.58000415015662 40.0 35.0 41.0 32.0 41.0 25 37.48379238077956 40.0 35.0 41.0 32.0 41.0 26 37.38820942301145 40.0 35.0 41.0 32.0 41.0 27 37.28099973859403 39.0 35.0 41.0 32.0 41.0 28 37.17716003524938 39.0 35.0 41.0 32.0 41.0 29 37.098609338211716 39.0 35.0 41.0 31.0 41.0 30 36.98100494874736 39.0 35.0 41.0 31.0 41.0 31 36.90640498521844 39.0 35.0 41.0 31.0 41.0 32 36.77843104317151 39.0 35.0 41.0 31.0 41.0 33 36.65903094741248 39.0 35.0 41.0 30.0 41.0 34 36.61184133106841 39.0 35.0 41.0 30.0 41.0 35 36.503315633783714 39.0 35.0 41.0 30.0 41.0 36 36.41940341947753 39.0 35.0 41.0 30.0 41.0 37 36.268710513999594 38.0 35.0 41.0 30.0 41.0 38 36.18099309115702 38.0 35.0 41.0 30.0 41.0 39 36.111720060258115 38.0 35.0 41.0 30.0 41.0 40 36.05099078252012 38.0 35.0 40.0 30.0 41.0 41 35.96874626643107 38.0 35.0 40.0 30.0 41.0 42 35.849257687895644 38.0 35.0 40.0 29.0 41.0 43 35.708902445268684 38.0 35.0 40.0 29.0 41.0 44 35.59830705948827 38.0 34.0 40.0 29.0 41.0 45 35.55143858621591 37.0 34.0 40.0 29.0 41.0 46 35.47554506737716 37.0 34.0 40.0 28.0 41.0 47 35.38138681705445 37.0 34.0 40.0 28.0 41.0 48 35.304533013058624 37.0 34.0 40.0 28.0 41.0 49 35.2298117787194 37.0 34.0 40.0 28.0 41.0 50 35.10302943467141 36.0 34.0 40.0 28.0 41.0 51 34.91282290598997 36.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 10.0 10 22.0 11 23.0 12 30.0 13 35.0 14 37.0 15 80.0 16 160.0 17 295.0 18 673.0 19 1136.0 20 2067.0 21 3385.0 22 5235.0 23 7839.0 24 11143.0 25 15764.0 26 21303.0 27 26185.0 28 30946.0 29 36990.0 30 44257.0 31 54552.0 32 67308.0 33 87390.0 34 137574.0 35 233734.0 36 174415.0 37 243267.0 38 361436.0 39 658843.0 40 284.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.2511455600061443 90.70894915698821 3.413144498212828 3.62676078479282 2 3.2615559853433 2.800726906219935 91.10635809383845 2.8313590145983105 3 28.32459434913956 15.72181733741402 42.000977352900755 13.952610960545664 4 27.401678567674953 15.695003013804213 43.55441151767275 13.348906900848087 5 25.08567558171811 14.089197825030475 45.805197756759505 15.019928836491914 6 23.783541484947598 14.747518664476006 46.30883094040573 15.160108910170669 7 23.028159082150644 17.09747747731562 43.855073296976045 16.01929014355769 8 25.72427868571187 19.820052083567266 42.55967646744418 11.895992763276682 9 82.3555462531362 4.360583932426108 9.06292697431125 4.220942840126445 10 83.29629333522576 4.380616073682347 8.478895734950518 3.8441948561413786 11 76.68860620313669 6.754424812546768 9.98269869773116 6.5742702865853815 12 42.22815800418789 22.951983047239022 16.078802670832392 18.741056277740697 13 33.11380322328831 24.457582614616634 23.2712845992359 19.15732956285915 14 28.26274623588879 22.572180835439106 27.72717840553139 21.437894523140717 15 22.47049301525048 23.913705487998232 31.49340062216417 22.122400874587118 16 19.662085624378488 29.569461674381586 29.608537824365733 21.159914876874193 17 19.710593948496737 22.758443817030194 36.61390338399459 20.917058850478483 18 23.308159908588756 20.433143402284024 33.849198399943944 22.409498289183272 19 22.867587546296257 20.825387100917975 29.092418238770545 27.214607114015223 20 23.842335370383513 21.390509076895576 31.48360912711067 23.28354642561024 21 26.50544236447538 23.991902703081447 26.785398275798567 22.717256656644608 22 28.148482183521363 21.64005745541501 26.351248774940238 23.860211586123388 23 27.074966021715557 23.631593651158674 27.005751829617207 22.287688497508558 24 29.220695806994364 20.44001541486744 25.09173912223289 25.247549655905306 25 28.85850032024477 22.581972330492604 23.677676559071013 24.881850790191617 26 27.777079098212287 20.30297939923339 28.44653888615905 23.473402616395276 27 28.746482023623553 21.800539161039552 25.555263108251715 23.89771570708518 28 25.83234445221975 24.849242416756574 24.788112945344594 24.530300185679085 29 25.312227421396305 23.975912922168394 25.57430711697962 25.137552539455683 30 24.623364303802244 24.472808838575975 28.054699423559416 22.849127434062368 31 24.95995817504498 23.76593475989727 26.622356408623343 24.651750656434405 32 26.29155658720584 23.828546430101753 27.039483080925358 22.84041390176705 33 26.823710868828996 25.608981585701184 24.294181426522016 23.2731261189478 34 28.758564189538195 24.833611956762912 24.29440600209664 22.113417851602257 35 27.579183101855804 24.174797051053215 24.642677803219694 23.603342043871287 36 26.35937841074154 24.645462540345 24.97141152935068 24.023747519562775 37 25.64711451827192 23.679158757863515 27.227542667113426 23.446184056751147 38 27.65544896699727 25.67289579423847 24.258788315961663 22.412866922802596 39 26.049239542189216 27.112065906643036 25.435564326978444 21.403130224189304 40 26.469734848110555 24.955601408897323 25.56105715807695 23.01360658491517 41 24.99373434146806 25.648237396145024 24.441278427899114 24.9167498344878 42 26.821959179346955 22.977315172056333 27.139509041861785 23.061216606734934 43 23.794590603218975 24.566187362503605 27.74972579322339 23.889496241054033 44 24.29431617186679 25.435070260714276 25.09879079527601 25.171822772142928 45 24.46458937254483 22.390229704880745 27.069396547464947 26.075784375109478 46 25.262506389175098 23.92830290034863 26.279249845716578 24.52994086475969 47 23.570688755321317 24.461939380764296 26.815626148142623 25.15174571577176 48 23.949413004363056 24.61851347139042 25.702180449169116 25.72989307507741 49 24.64052187770333 24.806528142463556 27.701621705139456 22.851328274693657 50 24.71386826037472 22.847330829465392 29.090801294633273 23.347999615526614 51 23.70008920141824 24.355310897933993 26.130266409512664 25.814333491135105 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 876.0 1 1931.0 2 2986.0 3 6679.0 4 10372.0 5 7227.0 6 4082.0 7 4016.0 8 3950.0 9 4094.0 10 4238.0 11 4258.0 12 4278.0 13 4631.0 14 4984.0 15 5125.0 16 5266.0 17 4938.5 18 4611.0 19 5316.0 20 6021.0 21 6988.0 22 7955.0 23 7793.5 24 7632.0 25 9529.5 26 17031.5 27 22636.0 28 23404.0 29 24172.0 30 27446.5 31 30721.0 32 36207.5 33 41694.0 34 45508.5 35 49323.0 36 53878.0 37 58433.0 38 71007.5 39 83582.0 40 98173.0 41 112764.0 42 127717.0 43 142670.0 44 158116.0 45 173562.0 46 184089.5 47 194617.0 48 189476.0 49 184335.0 50 166937.5 51 149540.0 52 139355.5 53 129171.0 54 132377.0 55 135583.0 56 143901.0 57 152219.0 58 140114.0 59 128009.0 60 112514.0 61 97019.0 62 86086.5 63 75154.0 64 63669.5 65 52185.0 66 45299.0 67 38413.0 68 33454.0 69 28495.0 70 23885.5 71 19276.0 72 15666.5 73 12057.0 74 8998.0 75 4355.0 76 2771.0 77 2429.0 78 2087.0 79 1511.0 80 935.0 81 571.5 82 208.0 83 123.0 84 38.0 85 38.5 86 39.0 87 29.5 88 20.0 89 32.0 90 44.0 91 35.0 92 26.0 93 15.5 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2226422.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.945541417625165 #Duplication Level Percentage of deduplicated Percentage of total 1 72.98336962548166 11.63759343160964 2 10.850910005538541 3.460472698244762 3 4.259051946235733 2.037386676255568 4 2.2959569946804352 1.464411094070523 5 1.4100311189945598 1.1241854804034055 6 0.9122044703514591 0.872735649799921 7 0.6335956496617817 0.7072117971596344 8 0.4708052091243213 0.6005795169380432 9 0.36077154904385517 0.5177427909821622 >10 2.739013662297416 9.873134828427975 >50 1.2126882995694022 14.379477153554465 >100 1.856619611620626 50.099416242776066 >500 0.009045649751062911 0.9767151607862573 >1k 0.005370854539693603 1.7016452420509844 >5k 5.653531094414319E-4 0.5472922369406403 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTGC 6303 0.2830999693678916 Illumina Single End Adapter 1 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5839 0.2622593560430143 No Hit ATCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTG 4477 0.20108496951611152 Illumina Single End Adapter 1 (95% over 21bp) ATGCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCT 3219 0.14458175494133635 No Hit CCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTGC 2991 0.13434110873859492 Illumina Single End Adapter 1 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTGCT 2845 0.12778350195964647 Illumina Single End Adapter 1 (95% over 23bp) ATGCCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTC 2424 0.10887423857651425 No Hit ATGTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTC 2381 0.10694288863476915 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1389673655757983 0.0 2 0.0 0.0 0.0 0.604063380616972 0.0 3 0.0 0.0 0.0 0.8884209732027442 0.0 4 4.4915114924304556E-5 0.0 0.0 1.20902506353243 0.0 5 4.4915114924304556E-5 0.0 0.0 2.2046584160594893 0.0 6 4.4915114924304556E-5 0.0 0.0 2.444415299525427 0.0 7 4.4915114924304556E-5 0.0 0.0 2.850582683785913 0.0 8 4.4915114924304556E-5 0.0 0.0 4.099133048451731 0.0 9 4.4915114924304556E-5 0.0 0.0 4.254584261204749 0.0 10 4.4915114924304556E-5 0.0 0.0 4.5695290470539724 0.0 11 4.4915114924304556E-5 0.0 0.0 4.801066464488763 0.0 12 4.4915114924304556E-5 0.0 0.0 5.5256370984476435 0.0 13 8.983022984860911E-5 0.0 0.0 6.115731878323157 0.0 14 1.3474534477291367E-4 0.0 0.0 6.366043813796306 0.0 15 1.3474534477291367E-4 0.0 0.0 6.49661205288126 0.0 16 1.3474534477291367E-4 0.0 0.0 6.590888879107375 0.0 17 1.3474534477291367E-4 0.0 0.0 6.715663068367093 0.0 18 1.3474534477291367E-4 0.0 0.0 6.972532610619191 0.0 19 1.3474534477291367E-4 0.0 0.0 7.30256887508298 0.0 20 1.7966045969721822E-4 0.0 0.0 7.674780432460692 4.4915114924304556E-5 21 1.7966045969721822E-4 0.0 0.0 7.918355100695196 4.4915114924304556E-5 22 1.7966045969721822E-4 0.0 0.0 8.200466937534753 4.4915114924304556E-5 23 2.2457557462152278E-4 0.0 0.0 8.632235937302093 4.4915114924304556E-5 24 2.2457557462152278E-4 0.0 0.0 8.998922935544115 4.4915114924304556E-5 25 2.6949068954582733E-4 0.0 0.0 9.433297011977064 4.4915114924304556E-5 26 2.6949068954582733E-4 0.0 0.0 9.737237594669834 4.4915114924304556E-5 27 3.144058044701319E-4 0.0 0.0 10.014229108408019 4.4915114924304556E-5 28 3.5932091939443645E-4 0.0 0.0 10.272491019222771 4.4915114924304556E-5 29 3.5932091939443645E-4 0.0 0.0 10.516200432802048 4.4915114924304556E-5 30 3.5932091939443645E-4 0.0 0.0 10.774103022697405 4.4915114924304556E-5 31 4.0423603431874103E-4 0.0 0.0 11.054238594480292 4.4915114924304556E-5 32 4.4915114924304556E-4 0.0 0.0 11.3395843195944 4.4915114924304556E-5 33 4.940662641673501E-4 0.0 0.0 11.635844417635111 4.4915114924304556E-5 34 5.389813790916547E-4 0.0 0.0 11.938662122454772 4.4915114924304556E-5 35 5.389813790916547E-4 0.0 0.0 12.234248493771622 4.4915114924304556E-5 36 5.389813790916547E-4 0.0 0.0 12.529789949973544 4.4915114924304556E-5 37 5.838964940159592E-4 0.0 0.0 12.843342367260115 4.4915114924304556E-5 38 5.838964940159592E-4 0.0 0.0 13.152852424203498 4.4915114924304556E-5 39 5.838964940159592E-4 0.0 0.0 13.46716839844378 4.4915114924304556E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAC 40 6.8193913E-9 45.000004 2 TATTCGA 20 7.0347113E-4 45.000004 15 CAAATCG 40 6.8193913E-9 45.000004 15 TCCGTAT 20 7.0347113E-4 45.000004 39 TCGTAGT 75 0.0 45.000004 2 CGCACAT 20 7.0347113E-4 45.000004 14 ATACGTT 150 0.0 45.000004 1 CTTACGA 20 7.0347113E-4 45.000004 29 AATCCCG 35 1.2126111E-7 45.0 34 ATTACGC 110 0.0 45.0 1 CCCGTAA 25 3.8919876E-5 45.0 28 TCGCTCA 55 1.8189894E-12 45.0 32 ACGTGCA 45 3.8562575E-10 45.0 23 ATACCCG 35 1.2126111E-7 45.0 1 TACCGAA 25 3.8919876E-5 45.0 30 TAATGCG 100 0.0 42.75 3 TTCGTTA 85 0.0 42.35294 2 CGTCCTA 80 0.0 42.187504 14 CAGTACG 55 6.184564E-11 40.909092 27 ACACGTT 50 1.0822987E-9 40.5 25 >>END_MODULE