##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545574_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2023975 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.81681246062822 31.0 31.0 34.0 31.0 34.0 2 32.454619251720004 33.0 31.0 34.0 31.0 34.0 3 32.4469373386529 34.0 31.0 34.0 31.0 34.0 4 35.95500339678109 37.0 35.0 37.0 35.0 37.0 5 35.73273829963315 37.0 35.0 37.0 35.0 37.0 6 35.74678392766709 37.0 35.0 37.0 35.0 37.0 7 35.73613409256537 37.0 35.0 37.0 33.0 37.0 8 35.71626675230672 37.0 35.0 37.0 33.0 37.0 9 37.86032040909596 39.0 38.0 39.0 35.0 39.0 10 37.784438048888944 39.0 38.0 39.0 35.0 39.0 11 37.61675317135834 39.0 37.0 39.0 35.0 39.0 12 37.15466890648353 39.0 37.0 39.0 33.0 39.0 13 36.937302585259204 39.0 37.0 39.0 33.0 39.0 14 37.7873842315246 40.0 36.0 41.0 33.0 41.0 15 37.756628910930225 40.0 36.0 41.0 33.0 41.0 16 37.678322113662475 40.0 36.0 41.0 32.0 41.0 17 37.76234489062365 40.0 36.0 41.0 32.0 41.0 18 37.81817561975815 40.0 36.0 41.0 33.0 41.0 19 37.782449387961805 40.0 36.0 41.0 33.0 41.0 20 37.72179350041379 40.0 36.0 41.0 33.0 41.0 21 37.69320421447893 40.0 36.0 41.0 33.0 41.0 22 37.60786719203548 40.0 36.0 41.0 32.0 41.0 23 37.55110710359565 40.0 35.0 41.0 32.0 41.0 24 37.53710495435961 40.0 35.0 41.0 32.0 41.0 25 37.46602057831742 40.0 35.0 41.0 32.0 41.0 26 37.33988463296237 39.0 35.0 41.0 32.0 41.0 27 37.249044578119786 39.0 35.0 41.0 32.0 41.0 28 37.157812720018775 39.0 35.0 41.0 31.0 41.0 29 37.1133047591991 39.0 35.0 41.0 31.0 41.0 30 37.04014575278845 39.0 35.0 41.0 31.0 41.0 31 36.93099321878976 39.0 35.0 41.0 31.0 41.0 32 36.776604948183646 39.0 35.0 41.0 31.0 41.0 33 36.673925814301064 39.0 35.0 41.0 30.0 41.0 34 36.60605343445447 39.0 35.0 41.0 30.0 41.0 35 36.48884546498845 39.0 35.0 41.0 30.0 41.0 36 36.378778394001905 39.0 35.0 41.0 30.0 41.0 37 36.26415099000729 39.0 35.0 41.0 30.0 41.0 38 36.16580985437073 38.0 35.0 41.0 30.0 41.0 39 36.090079669956395 38.0 35.0 41.0 29.0 41.0 40 36.00175891500636 38.0 35.0 40.0 29.0 41.0 41 35.898788275546885 38.0 35.0 40.0 29.0 41.0 42 35.76930446275275 38.0 35.0 40.0 28.0 41.0 43 35.62509615978458 38.0 34.0 40.0 28.0 41.0 44 35.55367926975383 38.0 34.0 40.0 28.0 41.0 45 35.51984782420732 38.0 34.0 40.0 28.0 41.0 46 35.43601576106424 37.0 34.0 40.0 28.0 41.0 47 35.34727257006633 37.0 34.0 40.0 28.0 41.0 48 35.27444459541249 37.0 34.0 40.0 28.0 41.0 49 35.22401462468657 37.0 34.0 40.0 28.0 41.0 50 35.09198581998295 37.0 34.0 40.0 27.0 41.0 51 34.86893019923665 36.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 10.0 10 26.0 11 24.0 12 37.0 13 39.0 14 46.0 15 76.0 16 177.0 17 354.0 18 667.0 19 1296.0 20 2182.0 21 3625.0 22 5566.0 23 8163.0 24 11319.0 25 15529.0 26 20212.0 27 24828.0 28 29046.0 29 34140.0 30 41255.0 31 50616.0 32 61914.0 33 80587.0 34 127957.0 35 187306.0 36 159118.0 37 222823.0 38 333081.0 39 601681.0 40 273.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.407391395644709 90.39775688928964 3.5460912313640236 3.648760483701627 2 3.7558270235551325 3.083289072246446 89.97492557961438 3.1859583245840484 3 29.439247026272557 16.510628836818636 40.69837819143023 13.351745945478577 4 28.35944119863141 15.503106510702949 41.901604515866055 14.23584777479959 5 25.47738978989365 14.061092651836116 45.548783952370954 14.91273360589928 6 23.551377857928088 14.869057177089637 46.19849553477686 15.381069430205413 7 23.220247285663113 17.424721155152607 43.9016786274534 15.453352931730876 8 26.335750194542918 20.01200607715016 42.210748650551515 11.441495077755407 9 81.76963648266407 4.631331908743932 9.112266702898998 4.486764905693005 10 82.28821996319124 4.623327857310491 9.068936128163637 4.019516051334627 11 75.81679615607901 7.236205980805099 10.396669919341889 6.550327943774009 12 41.97739596585926 23.304339233439148 17.01261132178016 17.70565347892143 13 32.69976160772737 24.901987425734013 23.978062970145384 18.420187996393235 14 26.386541335737846 23.34697810002594 29.16177324324658 21.10470732098964 15 23.0306204375054 23.699996294420632 33.087266394100716 20.182116873973246 16 20.01166022307588 28.03399251472968 31.53280055336652 20.421546708827925 17 20.199804839486653 22.966835064662362 36.084338986400525 20.749021109450464 18 25.144282908632764 21.143195938685015 31.96492051532257 21.74760063735965 19 24.446991687150284 21.724329598932794 28.92194814659272 24.9067305673242 20 24.850010499141543 21.85061574377154 30.397707481564744 22.901666275522178 21 27.313084400746057 24.01808322731259 26.860410825232524 21.80842154670883 22 26.422411344013636 23.249743697427093 27.387986511691103 22.939858446868165 23 26.714559221334255 23.842142318951566 27.838634370483824 21.60466408923035 24 29.645919539520005 20.4713002878 26.469398090391433 23.413382082288567 25 28.32455934485357 23.24623574895935 24.93484356279104 23.49436134339604 26 26.98017515038476 22.1173186427698 28.484739188972195 22.417767017873246 27 28.332711619461705 22.925629022097603 24.865919786558628 23.87573957188206 28 24.676095307501328 24.94966588026038 25.404019318420435 24.970219493817858 29 24.121938265047742 23.33912227176719 27.414716090860807 25.124223372324263 30 23.73245716967848 23.395545893600463 27.839869563606268 25.032127373114786 31 24.663842191726676 23.17899183537346 27.287837053323287 24.869328919576574 32 25.86958831013229 24.089675020689487 27.33734359367087 22.703393075507357 33 25.659457256141998 24.40450104373819 25.14749441075112 24.788547289368694 34 27.59668474165936 23.622920243580083 25.716424362949148 23.06397065181141 35 26.035795896688445 24.89161180350548 25.1903803159624 23.882211983843675 36 24.296792203461013 24.72604651737299 26.139799157598294 24.837362121567708 37 24.444175446831114 24.73686680912561 27.87405970923554 22.944898034807743 38 25.99246532195309 26.470435652614288 24.33864054644944 23.198458478983188 39 25.5991304240418 26.79227757259848 25.45145073432231 22.157141269037414 40 24.963450635506863 24.719574105411382 26.872960387356564 23.444014871725194 41 23.945404463987945 25.830655022912836 24.73592806235255 25.488012450746673 42 25.780950851665658 23.985128274805767 27.414172605886932 22.819748267641646 43 23.3813658765548 24.717696611865264 27.68779258637088 24.213144925209058 44 23.119257895972034 25.081979767536655 26.586593213848985 25.212169122642326 45 23.07834829975667 23.277609654269448 27.736014525871123 25.908027520102767 46 24.859348559147225 23.495102459269507 27.177311972726937 24.468237008856335 47 22.759866105065527 24.319569164638892 27.28457614348003 25.63598858681555 48 22.68985535888536 24.535036252918143 26.5214244247088 26.25368396348769 49 23.29332131078694 24.570461591669858 28.810731357847803 23.325485739695402 50 23.42627749848689 24.618831754344793 28.81863659383145 23.136254153336875 51 23.338430563618623 24.225496856433505 27.149495423609483 25.286577156338392 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 795.0 1 1405.0 2 2015.0 3 5234.5 4 8454.0 5 6016.0 6 3578.0 7 3627.0 8 3676.0 9 4079.0 10 4482.0 11 4530.0 12 4578.0 13 4821.0 14 5064.0 15 5223.5 16 5383.0 17 5695.5 18 6008.0 19 5952.5 20 5897.0 21 7569.0 22 9241.0 23 9598.0 24 9955.0 25 12088.5 26 16151.0 27 18080.0 28 20928.5 29 23777.0 30 28049.0 31 32321.0 32 38591.5 33 44862.0 34 51987.5 35 59113.0 36 63987.0 37 68861.0 38 77142.0 39 85423.0 40 91900.5 41 98378.0 42 107218.0 43 116058.0 44 129173.0 45 142288.0 46 156489.0 47 170690.0 48 167796.0 49 164902.0 50 152488.5 51 140075.0 52 134439.0 53 128803.0 54 128488.0 55 128173.0 56 124085.0 57 119997.0 58 113355.5 59 106714.0 60 98444.5 61 90175.0 62 78621.5 63 67068.0 64 56832.0 65 46596.0 66 39538.5 67 32481.0 68 27098.5 69 21716.0 70 17656.5 71 13597.0 72 11476.5 73 9356.0 74 7149.5 75 4018.5 76 3094.0 77 2399.0 78 1704.0 79 1217.5 80 731.0 81 590.5 82 450.0 83 276.0 84 102.0 85 89.0 86 76.0 87 43.0 88 10.0 89 7.0 90 4.0 91 4.0 92 4.0 93 3.5 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2023975.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.453635599954296 #Duplication Level Percentage of deduplicated Percentage of total 1 74.41767524483926 13.732766611640033 2 9.39753840514964 3.468374985304142 3 3.60229403318734 1.9942626423698655 4 1.8787369891947026 1.3867811114701727 5 1.163504475744927 1.0735443807156373 6 0.8216511368381036 0.9097470401699128 7 0.5945949494891205 0.7680706969211822 8 0.4629737018115524 0.6834838388473832 9 0.361367310125174 0.6001686592907072 >10 4.15675465368464 19.329727300687807 >50 2.0857958439224453 27.77302510123703 >100 1.0506674434896004 26.377860063024954 >500 0.0021486041745166014 0.2816605510883158 >1k 0.004297208349033203 1.6205270172329158 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4840 0.23913338850529278 No Hit ACTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 4507 0.2226806161143295 No Hit ATGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCT 2404 0.11877617065428181 No Hit ATCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTG 2160 0.10672068577922157 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.940772489778777E-5 0.0 0.0 0.08137452290665645 0.0 2 4.940772489778777E-5 0.0 0.0 0.4171988290369199 0.0 3 4.940772489778777E-5 0.0 0.0 0.5784656431032992 0.0 4 4.940772489778777E-5 0.0 0.0 0.8077668943539322 0.0 5 4.940772489778777E-5 0.0 0.0 1.6911276078014799 0.0 6 4.940772489778777E-5 0.0 0.0 1.9103990908978619 0.0 7 9.881544979557554E-5 0.0 0.0 2.2969651304981533 0.0 8 9.881544979557554E-5 0.0 0.0 3.3899628206870145 0.0 9 9.881544979557554E-5 0.0 0.0 3.542336244271792 0.0 10 9.881544979557554E-5 0.0 0.0 3.823812053014489 0.0 11 9.881544979557554E-5 0.0 0.0 4.044812806482294 0.0 12 9.881544979557554E-5 0.0 0.0 4.646253041663064 0.0 13 9.881544979557554E-5 0.0 0.0 5.1801035091836605 0.0 14 9.881544979557554E-5 0.0 0.0 5.387912400103756 0.0 15 9.881544979557554E-5 0.0 0.0 5.512321051396386 0.0 16 9.881544979557554E-5 0.0 0.0 5.610741239392779 0.0 17 1.482231746933633E-4 0.0 0.0 5.722106251312392 0.0 18 1.482231746933633E-4 0.0 0.0 5.9498264553662965 0.0 19 1.482231746933633E-4 0.0 0.0 6.2326856804061315 0.0 20 1.482231746933633E-4 0.0 0.0 6.538321866623846 0.0 21 1.482231746933633E-4 0.0 0.0 6.746130757543942 0.0 22 1.482231746933633E-4 0.0 0.0 6.979384626786398 0.0 23 1.482231746933633E-4 0.0 0.0 7.335416692399857 0.0 24 5.928926987734532E-4 0.0 0.0 7.660667745401994 0.0 25 5.928926987734532E-4 0.0 0.0 8.003705579367335 0.0 26 6.42300423671241E-4 0.0 0.0 8.271001371064365 0.0 27 6.917081485690288E-4 0.0 0.0 8.515273162959028 0.0 28 6.917081485690288E-4 0.0 0.0 8.74709420817945 0.0 29 7.411158734668165E-4 0.0 0.0 8.993786978594104 0.0 30 8.893390481601799E-4 0.0 0.0 9.224965723390852 0.0 31 0.0010375622228535432 0.0 0.0 9.481688261959757 0.0 32 0.0010375622228535432 0.0 0.0 9.752689633024124 0.0 33 0.0010375622228535432 0.0 0.0 10.009807433392211 0.0 34 0.0010375622228535432 0.0 0.0 10.280462950382292 0.0 35 0.0010869699477513309 0.0 0.0 10.551266690547067 0.0 36 0.0011363776726491187 0.0 0.0 10.836250447757507 0.0 37 0.0011363776726491187 0.0 0.0 11.156560728269865 0.0 38 0.001284600847342482 0.0 0.0 11.42133672599711 0.0 39 0.0013340085722402697 0.0 0.0 11.70785212267938 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGCGAA 55 1.8189894E-12 45.0 19 CGACTTA 20 7.034562E-4 45.0 32 ATACGCA 60 3.6379788E-12 41.250004 1 ATCGTTC 125 0.0 39.6 1 TCGTATT 105 0.0 38.57143 2 ATCGTAC 70 0.0 38.571426 1 CGAATTA 70 0.0 38.571426 18 ATTGTTT 3750 0.0 38.459995 1 ATCGTTA 160 0.0 37.96875 1 ATCGGTT 250 0.0 37.8 1 CGTTTTT 2875 0.0 37.565216 1 CGACATA 30 1.14022885E-4 37.500004 8 CGGGATA 285 0.0 37.10526 8 ACATACG 480 0.0 37.031254 19 AGTTACG 165 0.0 36.818184 3 TTACGGG 770 0.0 36.525974 5 AGGGTAC 315 0.0 36.428574 8 ATGCGAT 180 0.0 36.25 1 ATTCGTT 460 0.0 36.195652 1 ATGCGTT 485 0.0 36.18557 1 >>END_MODULE