SRR1545572_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545572_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	3151121
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC	7821	0.24819738753288118	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7050	0.22372990437371337	No Hit
ATCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTG	4293	0.13623723113139738	No Hit
ATGCCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTC	3856	0.12236915053404805	No Hit
ATGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCT	3719	0.11802149139940993	No Hit
ATGTCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTC	3178	0.10085299802832072	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGTAC	115	0.0	45.000004	1
CGAGTTA	25	3.892358E-5	45.0	16
GATCGAC	40	6.8212103E-9	45.0	11
CAATTCG	20	7.0351595E-4	45.0	3
ACTACGC	20	7.0351595E-4	45.0	27
ACTCGAT	20	7.0351595E-4	45.0	34
GTATACG	25	3.892358E-5	45.0	3
CGTTAGA	30	2.166711E-6	44.999996	25
ACCGCGT	50	1.0822987E-9	40.5	13
TAGCACG	50	1.0822987E-9	40.5	29
CGTAATC	45	1.9301297E-8	40.000004	36
CGTAAAC	45	1.9301297E-8	40.000004	37
CCGAATA	45	1.9301297E-8	40.000004	13
CACGTTA	45	1.9301297E-8	40.000004	33
CACGCTA	40	3.460773E-7	39.375	13
ATTACGC	225	0.0	39.0	1
GTCGATC	35	6.251754E-6	38.57143	27
CGCATAT	35	6.251754E-6	38.57143	45
TGCACGA	35	6.251754E-6	38.57143	16
GTACGTC	35	6.251754E-6	38.57143	30