##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545571_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2549684 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.50414129750981 33.0 31.0 34.0 31.0 34.0 2 32.91824908498465 34.0 31.0 34.0 31.0 34.0 3 33.000860106585755 34.0 33.0 34.0 31.0 34.0 4 36.392492167656854 37.0 37.0 37.0 35.0 37.0 5 36.37507040088105 37.0 37.0 37.0 35.0 37.0 6 36.37991178514671 37.0 37.0 37.0 35.0 37.0 7 36.447059714066526 37.0 37.0 37.0 35.0 37.0 8 36.471524314385626 37.0 37.0 37.0 35.0 37.0 9 38.2669675928468 39.0 39.0 39.0 37.0 39.0 10 38.039291143529944 39.0 39.0 39.0 35.0 39.0 11 37.85793965056062 39.0 38.0 39.0 35.0 39.0 12 37.488872346533924 39.0 37.0 39.0 35.0 39.0 13 37.4067668777778 39.0 37.0 39.0 35.0 39.0 14 38.51116020651971 40.0 38.0 41.0 34.0 41.0 15 38.644243757265606 40.0 38.0 41.0 34.0 41.0 16 38.755679135139886 41.0 38.0 41.0 35.0 41.0 17 38.72015904716035 40.0 38.0 41.0 35.0 41.0 18 38.70404724663919 40.0 38.0 41.0 35.0 41.0 19 38.67040543063376 40.0 38.0 41.0 35.0 41.0 20 38.54125138644632 40.0 37.0 41.0 34.0 41.0 21 38.525670239919926 40.0 37.0 41.0 34.0 41.0 22 38.68114989936008 40.0 38.0 41.0 35.0 41.0 23 38.69237913404171 40.0 38.0 41.0 35.0 41.0 24 38.63489671661272 40.0 37.0 41.0 35.0 41.0 25 38.55189427395709 40.0 37.0 41.0 35.0 41.0 26 38.43600383420063 40.0 37.0 41.0 35.0 41.0 27 38.36164246236004 40.0 36.0 41.0 35.0 41.0 28 38.2936214840741 40.0 36.0 41.0 34.0 41.0 29 38.219891170827445 40.0 36.0 41.0 34.0 41.0 30 38.144956002390884 40.0 36.0 41.0 34.0 41.0 31 38.04864289064841 40.0 36.0 41.0 34.0 41.0 32 37.99267517072704 40.0 35.0 41.0 34.0 41.0 33 37.91740427441204 40.0 35.0 41.0 34.0 41.0 34 37.73954772434545 40.0 35.0 41.0 33.0 41.0 35 37.675503709479294 40.0 35.0 41.0 33.0 41.0 36 37.60807966791179 40.0 35.0 41.0 33.0 41.0 37 37.51247801688366 40.0 35.0 41.0 33.0 41.0 38 37.357509793370475 40.0 35.0 41.0 33.0 41.0 39 37.25070753865969 39.0 35.0 41.0 33.0 41.0 40 37.12551633849528 39.0 35.0 41.0 33.0 41.0 41 36.95340991275781 39.0 35.0 41.0 32.0 41.0 42 36.88274076316908 39.0 35.0 41.0 32.0 41.0 43 36.79159221299581 39.0 35.0 41.0 32.0 41.0 44 36.67712704790084 38.0 35.0 41.0 32.0 41.0 45 36.61623714938792 38.0 35.0 41.0 32.0 41.0 46 36.60622414385469 38.0 35.0 41.0 32.0 41.0 47 36.575251678247184 38.0 35.0 41.0 32.0 41.0 48 36.42416942648579 38.0 35.0 40.0 32.0 41.0 49 36.34040963507635 38.0 35.0 40.0 31.0 41.0 50 36.21366334024138 37.0 35.0 40.0 31.0 41.0 51 36.04151141866992 37.0 35.0 40.0 31.0 41.0 52 35.63054245153517 36.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 6.0 10 10.0 11 11.0 12 26.0 13 39.0 14 69.0 15 86.0 16 155.0 17 309.0 18 595.0 19 1023.0 20 1679.0 21 2699.0 22 3668.0 23 4939.0 24 6962.0 25 8996.0 26 11233.0 27 14220.0 28 17572.0 29 22283.0 30 28675.0 31 36676.0 32 47710.0 33 67563.0 34 160788.0 35 253683.0 36 161475.0 37 238345.0 38 398973.0 39 1057820.0 40 1396.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.89633225136919 13.525911446281185 45.371622522634176 11.206133779715447 2 27.174779305984586 12.794997340846944 47.85518519157668 12.17503816159179 3 27.467717568137857 14.118337801860935 43.50095933456852 14.91298529543269 4 24.486995251176225 14.348601630633443 45.83618989647344 15.328213221716888 5 24.687765228946017 16.29496047353319 42.60371089123201 16.413563406288777 6 26.621338173671717 18.895282709543615 42.44710324887319 12.036275867911476 7 85.38065893655842 3.3293145346639035 7.044637688435115 4.245388840342567 8 86.12200570737394 3.3222156157390486 7.216619785040028 3.33915889184699 9 78.82251290748187 5.139107434489921 9.322253267463733 6.716126390564478 10 45.51885645436846 20.404214796814035 15.507176575607016 18.569752173210485 11 36.04607472926057 23.515110107762375 23.032893487977336 17.405921674999725 12 30.00764016246719 23.11627636993447 26.225602859020963 20.650480608577375 13 25.946391788158845 22.191338220736373 32.13515870986365 19.72711128124113 14 20.391468119186534 28.08551961733297 32.48194678242481 19.041065481055693 15 20.484107050128564 22.573267903002883 36.380351447473494 20.562273599395063 16 26.592981718518843 21.936796873651794 30.618186410551267 20.852034997278093 17 26.819245051543643 22.194593526099705 26.92659168744048 24.05956973491617 18 26.512108951540664 21.649074944189163 29.20883529096155 22.629980813308627 19 28.18439461517584 24.604264685349243 26.143906460565308 21.067434238909605 20 27.168857003456115 25.280348466711956 24.85107958476423 22.699714945067704 21 27.542981796959936 24.807819321923816 27.8283504936298 19.82084838748645 22 29.34842121611933 20.265648605866453 27.177328641510083 23.20860153650413 23 27.345506345100016 23.24539040916443 24.968505901123432 24.440597344612115 24 27.416260211069293 21.875220615574325 27.10986930145069 23.598649871905693 25 31.044631413147666 22.342180442752905 23.72494003178433 22.888248112315097 26 24.450245599062473 24.995371975507553 24.16570053387008 26.388681891559894 27 24.615717084940723 22.592015324251946 26.528228596171132 26.264038994636195 28 23.970578314802932 24.906106011568493 26.333969229128 24.789346444500573 29 24.592302418652665 25.611997408306287 25.740876124256967 24.054824048784084 30 27.15069789040524 24.282695424217277 26.8630544020357 21.70355228334178 31 24.71933776891568 26.390486036701017 24.129617631047612 24.760558563335692 32 28.861145145829838 25.94894112368435 22.537930190564794 22.651983539921027 33 27.812858377744064 23.580843743773737 23.978736188484532 24.627561689997663 34 25.239637539397037 24.142756514140576 25.72020689622714 24.897399050235244 35 23.93127932716368 27.42080979446865 26.12496293658351 22.522947941784157 36 26.539367231390244 25.670710566485887 23.008537528572166 24.781384673551702 37 26.601061151107352 27.068256301565214 24.452677272948335 21.8780052743791 38 25.667612143308737 23.482086407570506 26.957928904130863 23.89237254498989 39 23.952850627764068 25.721618835902802 23.13823987600032 27.187290660332806 40 27.008366526989224 22.58903456271444 26.658989898356033 23.743609011940304 41 24.223354737292937 22.952609029197344 26.294944785314573 26.529091448195146 42 24.19746917657247 24.625639883216902 25.33768890576244 25.83920203444819 43 22.579503969903723 22.468039176619534 28.011745769279646 26.9407110841971 44 26.640046374374236 21.999510527579105 25.703342061212293 25.65710103683437 45 22.564835485495458 22.911937322428976 26.610317200092247 27.91290999198332 46 22.24303090108421 24.45220662638978 25.583366409327585 27.721396063198423 47 23.37438678675475 24.447264837524965 28.678142075645454 23.500206300074833 48 22.39595181206769 24.373412548378546 30.024504997482044 23.206130642071724 49 23.9673230094396 22.536282927609854 26.209796978762856 27.286597084187687 50 21.357038754606453 23.560841265035197 27.720141005708943 27.36197897464941 51 23.695093195862704 24.33144656357415 25.78794078011236 26.185519460450784 52 22.118427224707062 23.196639269807555 27.11163422604527 27.573299279440118 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 323.0 1 276.0 2 229.0 3 210.5 4 192.0 5 296.5 6 401.0 7 557.5 8 714.0 9 942.5 10 1171.0 11 1272.5 12 1374.0 13 1357.5 14 1812.0 15 2283.0 16 2352.5 17 2422.0 18 2603.5 19 2785.0 20 3925.0 21 5065.0 22 5118.0 23 5171.0 24 7702.5 25 10234.0 26 10877.5 27 11521.0 28 15082.0 29 18643.0 30 22700.5 31 26758.0 32 32464.0 33 38170.0 34 43158.0 35 48146.0 36 51717.0 37 55288.0 38 63650.0 39 81717.5 40 91423.0 41 100802.0 42 110181.0 43 124066.5 44 137952.0 45 158276.0 46 178600.0 47 203571.5 48 228543.0 49 240093.5 50 251644.0 51 232334.0 52 213024.0 53 192528.5 54 172033.0 55 161930.5 56 151828.0 57 149251.5 58 146675.0 59 139911.5 60 133148.0 61 124733.5 62 116319.0 63 101185.0 64 77439.5 65 68828.0 66 59936.5 67 51045.0 68 43264.0 69 35483.0 70 31524.5 71 27566.0 72 22424.0 73 17282.0 74 14667.0 75 12052.0 76 9871.5 77 7691.0 78 5892.0 79 4093.0 80 3137.5 81 2182.0 82 1610.5 83 1039.0 84 707.0 85 375.0 86 280.0 87 185.0 88 128.0 89 55.0 90 39.0 91 32.0 92 25.0 93 22.5 94 20.0 95 13.0 96 6.0 97 7.0 98 8.0 99 19.0 100 30.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2549684.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.62538950222124 #Duplication Level Percentage of deduplicated Percentage of total 1 68.81416475284252 11.440622922860308 2 12.19444436977582 4.0547477482138365 3 5.164874989276037 2.5760417528098456 4 2.8185649834888276 1.8743896275129412 5 1.6060345462228363 1.3350474942488897 6 1.05607644451807 1.053460934054031 7 0.763525178394962 0.888573243989844 8 0.5495260746290014 0.7308868025867076 9 0.4255676330451993 0.6367704893023316 >10 3.5822884302154683 13.03423797621882 >50 1.3240481655448757 16.235721713077996 >100 1.6914113921685032 43.241471011730205 >500 0.005210171932840659 0.561147479687729 >1k 0.003078737960314935 1.1146959231995017 >5k 0.0011841299847365136 1.2221848805070725 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCTT 7673 0.30093925364868745 Illumina Single End Adapter 2 (95% over 21bp) GTCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 6368 0.24975644040594835 No Hit GCCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 6151 0.24124558180543157 No Hit GCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCT 5819 0.22822436035210636 No Hit TGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 5030 0.19727934912718595 No Hit ATCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 3946 0.15476427667114825 No Hit TTCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 3926 0.15397986574022507 No Hit GGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 3426 0.13436959246714494 No Hit AGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 3223 0.12640782151827443 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3209809529337753 0.0 2 0.0 0.0 0.0 0.711068508881885 0.0 3 0.0 0.0 0.0 2.4217510875857555 0.0 4 0.0 0.0 0.0 2.8116033202545885 0.0 5 3.922054654616023E-5 0.0 0.0 3.546125715971077 0.0 6 3.922054654616023E-5 0.0 0.0 5.729690424382002 0.0 7 3.922054654616023E-5 0.0 0.0 6.049141776000477 0.0 8 3.922054654616023E-5 0.0 0.0 6.58638482258978 0.0 9 7.844109309232046E-5 0.0 0.0 6.943448678346022 0.0 10 7.844109309232046E-5 0.0 0.0 8.270240547456076 0.0 11 7.844109309232046E-5 0.0 0.0 9.333038917763927 0.0 12 7.844109309232046E-5 0.0 0.0 9.773799419849675 0.0 13 1.1766163963848069E-4 0.0 0.0 9.997984063907527 0.0 14 1.1766163963848069E-4 0.0 0.0 10.148669403737875 0.0 15 1.1766163963848069E-4 0.0 0.0 10.351557291021162 0.0 16 1.1766163963848069E-4 0.0 0.0 10.782865641389286 0.0 17 1.1766163963848069E-4 0.0 0.0 11.307675774723457 0.0 18 1.9610273273080114E-4 0.0 0.0 11.899396160465376 0.0 19 1.9610273273080114E-4 0.0 0.0 12.314977071668489 0.0 20 1.9610273273080114E-4 0.0 0.0 12.792644108054175 0.0 21 1.9610273273080114E-4 0.0 0.0 13.491318924227473 0.0 22 1.9610273273080114E-4 0.0 0.0 14.100296350449703 0.0 23 1.9610273273080114E-4 0.0 0.0 14.692330500563992 0.0 24 2.745438258231216E-4 0.0 0.0 15.158035270253098 0.0 25 2.745438258231216E-4 0.0 0.0 15.579028616879581 0.0 26 3.1376437236928185E-4 0.0 0.0 15.965233338719623 0.0 27 3.1376437236928185E-4 0.0 0.0 16.38822693321996 0.0 28 3.1376437236928185E-4 0.0 0.0 16.762626270549607 0.0 29 3.1376437236928185E-4 0.0 0.0 17.203543654821537 0.0 30 3.1376437236928185E-4 0.0 0.0 17.651991384030335 0.0 31 3.1376437236928185E-4 0.0 0.0 18.036980268927444 0.0 32 3.1376437236928185E-4 0.0 0.0 18.463699815349667 0.0 33 3.1376437236928185E-4 0.0 0.0 18.9076764022522 0.0 34 3.1376437236928185E-4 0.0 0.0 19.393344430133304 0.0 35 3.1376437236928185E-4 0.0 0.0 19.895367425924153 0.0 36 3.1376437236928185E-4 0.0 0.0 20.297613351301575 0.0 37 3.1376437236928185E-4 0.0 0.0 20.74872807767551 0.0 38 3.1376437236928185E-4 0.0 0.0 21.27495015068534 0.0 39 3.1376437236928185E-4 0.0 0.0 22.272838516459295 0.0 40 3.1376437236928185E-4 0.0 0.0 22.757094604664736 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGACG 35 1.0202348E-7 46.000004 11 GATCGAC 50 1.6370905E-11 46.0 9 CGCATAT 20 6.312909E-4 46.0 43 TTAACGC 30 1.8623032E-6 46.0 22 CGTAAAC 40 5.6152203E-9 46.0 35 ATAACGG 30 1.8623032E-6 46.0 2 ACCGTAG 25 3.418335E-5 46.0 29 CGGTAAC 25 3.418335E-5 46.0 46 ACGGGTA 95 0.0 43.57895 5 ATCCGAT 60 1.8189894E-12 42.166668 34 AGTACGA 55 4.7293724E-11 41.81818 36 CGTTACA 45 1.5897967E-8 40.888885 31 GTATACG 45 1.5897967E-8 40.888885 1 TAAATCG 45 1.5897967E-8 40.888885 38 ACGCAGT 40 2.9124385E-7 40.25 43 GAACGTA 40 2.9124385E-7 40.25 1 CGTTATG 75 0.0 39.866665 1 TACGGGA 390 0.0 39.512817 4 ATTCGAC 35 5.3756885E-6 39.428574 11 TTATCGA 35 5.3756885E-6 39.428574 14 >>END_MODULE