##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545570_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1293441 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95940595666907 31.0 31.0 34.0 31.0 34.0 2 32.65879077592252 34.0 31.0 34.0 31.0 34.0 3 32.591096926724916 34.0 31.0 34.0 31.0 34.0 4 36.034230397830285 37.0 35.0 37.0 35.0 37.0 5 35.793061299278435 37.0 35.0 37.0 35.0 37.0 6 35.78639613248691 37.0 35.0 37.0 35.0 37.0 7 35.779989964752936 37.0 35.0 37.0 35.0 37.0 8 35.751344668987606 37.0 35.0 37.0 33.0 37.0 9 37.98477162854742 39.0 38.0 39.0 35.0 39.0 10 37.95992318165266 39.0 39.0 39.0 35.0 39.0 11 37.77064203160407 39.0 38.0 39.0 35.0 39.0 12 37.27364062218532 39.0 37.0 39.0 34.0 39.0 13 36.92762174695251 39.0 37.0 39.0 33.0 39.0 14 37.11956246941298 39.0 35.0 41.0 33.0 41.0 15 36.8499320803964 39.0 35.0 41.0 32.0 41.0 16 36.838431749109546 38.0 35.0 41.0 32.0 41.0 17 36.90357349117586 38.0 35.0 41.0 32.0 41.0 18 36.96257734214394 38.0 35.0 41.0 32.0 41.0 19 36.794902125415845 38.0 35.0 41.0 31.0 41.0 20 36.70089783762847 38.0 35.0 41.0 31.0 41.0 21 36.77162236236519 38.0 35.0 41.0 31.0 41.0 22 36.81341398641299 38.0 35.0 41.0 32.0 41.0 23 36.7780965656725 38.0 35.0 41.0 32.0 41.0 24 36.763073847202925 38.0 35.0 41.0 32.0 41.0 25 36.77452701746736 38.0 35.0 41.0 32.0 41.0 26 36.72831926620542 38.0 35.0 41.0 32.0 41.0 27 36.70139109553509 38.0 35.0 41.0 32.0 41.0 28 36.61025357940563 38.0 35.0 41.0 31.0 41.0 29 36.55463991013119 38.0 35.0 41.0 31.0 41.0 30 36.491133341219275 38.0 35.0 41.0 31.0 41.0 31 36.41423690759764 38.0 35.0 41.0 31.0 41.0 32 36.254177036293115 38.0 35.0 40.0 31.0 41.0 33 36.127724418817714 38.0 35.0 40.0 31.0 41.0 34 36.01856443394016 37.0 35.0 40.0 30.0 41.0 35 35.92350946042379 37.0 35.0 40.0 30.0 41.0 36 35.69620106367434 37.0 34.0 40.0 30.0 41.0 37 35.59236950119874 37.0 34.0 40.0 29.0 41.0 38 35.6063562234381 37.0 34.0 40.0 29.0 41.0 39 35.708488442843546 37.0 34.0 40.0 30.0 41.0 40 35.66882524985678 37.0 34.0 40.0 30.0 41.0 41 35.62380193607594 37.0 34.0 40.0 30.0 41.0 42 35.532948159212516 36.0 34.0 40.0 29.0 41.0 43 35.455648150940014 36.0 34.0 40.0 29.0 41.0 44 35.447761436354654 36.0 34.0 40.0 30.0 41.0 45 35.397372589859145 36.0 34.0 40.0 30.0 41.0 46 35.304706592724365 36.0 34.0 40.0 29.0 41.0 47 35.20149740111841 36.0 34.0 40.0 29.0 41.0 48 35.13737232699443 35.0 34.0 40.0 29.0 41.0 49 35.14818921002195 35.0 34.0 40.0 29.0 41.0 50 35.07401110680735 35.0 34.0 40.0 29.0 41.0 51 34.9426560623948 35.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 11.0 11 5.0 12 11.0 13 14.0 14 8.0 15 35.0 16 54.0 17 129.0 18 336.0 19 626.0 20 1156.0 21 1943.0 22 3113.0 23 4633.0 24 6513.0 25 9498.0 26 12826.0 27 15854.0 28 18963.0 29 22929.0 30 28093.0 31 34783.0 32 43903.0 33 58574.0 34 108837.0 35 224716.0 36 85131.0 37 111016.0 38 161922.0 39 337629.0 40 179.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 1.0806059186310006 92.62718593271745 2.943852869980154 3.348355278671389 2 3.073043146150462 2.154099027323241 92.30154293856465 2.4713148879616464 3 25.592895230628997 15.541489716191151 45.73258463277413 13.133030420405726 4 25.440974887915257 14.251287843821247 47.85428944961541 12.453447818648087 5 23.162633626118236 12.982579027570642 49.32246619675733 14.532321149553788 6 21.54261384941408 14.062179875232037 49.77103710180828 14.624169173545603 7 21.172979672053074 16.02021275033032 48.4539302527135 14.352877324903107 8 23.493224661967574 17.810476086655672 46.36175905974837 12.334540191628378 9 82.37051400102517 3.083712361058603 10.03331423698491 4.512459400931315 10 84.49685760695694 3.202078796017754 8.764991986491847 3.5360716105334533 11 79.06212962168355 5.34705487146302 9.453697540127457 6.137117966725966 12 52.23825439273999 18.577113297011614 13.876628311612205 15.308003998636197 13 44.0445292827427 19.706735753698855 20.52973425150432 15.719000712054127 14 38.48331698160179 21.576399696623195 22.29000008504447 17.65028323673055 15 26.12535090506641 28.31130295081105 27.227604506119725 18.335741638002816 16 19.226775709135556 31.891133805098182 30.103421802772605 18.778668682993658 17 19.41665680923985 21.560395874260983 41.18927728439102 17.833670032108152 18 26.13957652494393 19.779255489813604 36.766346512906274 17.314821472336195 19 23.97697305095478 18.968085904188904 29.772676140620252 27.282264904236065 20 24.96356617735173 20.98062455110051 34.069741101449544 19.98606817009821 21 28.016275964655517 25.708633018436867 27.121066983341336 19.154024033566277 22 30.75045556774526 24.91470426559851 24.162911180332152 20.171928986324076 23 27.540258890819143 28.895017244698444 25.806202215640294 17.75852164884212 24 29.68863674493077 21.881400079323292 26.348631286622275 22.08133188912366 25 26.983372260505117 24.26055769068709 24.71515902155568 24.04091102725211 26 30.23547266554872 18.17516222232015 31.190367399827284 20.398997712303846 27 30.47181896970948 20.44878738187517 26.136638625186613 22.942755023228738 28 21.390693506700345 24.561769728963284 26.794805483976464 27.25273128035991 29 18.86719224147062 25.025803264315883 28.98323155056937 27.123772943644127 30 19.21981752549981 27.33151338174683 30.67724001326694 22.771429079486424 31 22.422282887275106 24.485384335273118 29.413943117621912 23.678389659829865 32 23.993672691680565 28.20561587269926 29.23635480860743 18.564356627012753 33 30.464087654558654 26.495371648184957 24.33671114492273 18.70382955233366 34 33.05778926135788 23.56651752959741 25.707859886921785 17.667833322122924 35 32.029524346297976 26.604151252357084 22.91322139935258 18.45310300199236 36 24.827495030697186 22.30275675504333 30.015284810053185 22.8544634042063 37 21.46120310087588 27.204642500121768 31.514773383555955 19.819381015446393 38 23.642284418075505 32.3936692899019 24.52148957702748 19.442556714995117 39 24.984208788804438 31.5123766758592 24.379078751949258 19.124335783387107 40 25.283410685141416 29.590371729363767 23.935687828049364 21.19052975744545 41 25.723013264617407 29.29843726926856 22.08558411245662 22.892965353657416 42 27.775677437161804 23.163097505027288 22.310488070194157 26.75073698761675 43 20.92789698177188 25.48218279766916 23.8789399748423 29.710980245716655 44 19.30795451821923 25.31433594574472 23.49825001681561 31.879459519220436 45 18.756093242753245 21.72739228151883 26.017653685015397 33.49886079071253 46 22.078625928820873 21.33425490609931 26.61110943599283 29.976009729086982 47 21.56186482413964 24.66444159416626 26.670253996896648 27.10343958479745 48 22.622755889136034 27.36669086568309 24.36871878964715 25.64183445553373 49 21.708991751459866 24.02281974979918 27.378287838409328 26.889900660331627 50 20.696807971913678 20.869757491837664 34.17913921083374 24.254295325414923 51 23.577418683960072 19.208065926470557 29.82888280176676 27.38563258780261 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 723.0 1 1044.0 2 1365.0 3 4944.5 4 8524.0 5 5437.0 6 2350.0 7 2425.0 8 2500.0 9 2591.5 10 2683.0 11 2767.5 12 2852.0 13 2692.0 14 2532.0 15 2402.0 16 2272.0 17 2450.0 18 2628.0 19 2340.0 20 2052.0 21 2088.0 22 2124.0 23 3095.0 24 4066.0 25 4323.0 26 6285.0 27 7990.0 28 8874.5 29 9759.0 30 13272.5 31 16786.0 32 18113.5 33 19441.0 34 22795.5 35 26150.0 36 30499.0 37 34848.0 38 46102.5 39 57357.0 40 69919.0 41 82481.0 42 100416.5 43 118352.0 44 127359.0 45 136366.0 46 124342.0 47 112318.0 48 103696.5 49 95075.0 50 87410.5 51 79746.0 52 81257.0 53 82768.0 54 81793.0 55 80818.0 56 84024.0 57 87230.0 58 82291.0 59 77352.0 60 65324.0 61 53296.0 62 45160.0 63 37024.0 64 27157.0 65 17290.0 66 13503.5 67 9717.0 68 7022.0 69 4327.0 70 3219.5 71 2112.0 72 2018.0 73 1924.0 74 1304.0 75 639.0 76 594.0 77 456.5 78 319.0 79 185.5 80 52.0 81 30.0 82 8.0 83 4.5 84 1.0 85 1.0 86 1.0 87 1.5 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1293441.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.507014099504415 #Duplication Level Percentage of deduplicated Percentage of total 1 68.86203761592806 10.678445882307999 2 12.243368671135277 3.797161812174507 3 5.572901605637584 2.5925719132131846 4 3.117973397039013 1.934018297190546 5 1.860129649029171 1.4422528347200776 6 1.2686671585456568 1.1803943709087423 7 0.8688397494130745 0.9431177171050902 8 0.62039257011662 0.7696349065620965 9 0.446949096409541 0.623776134580516 >10 2.6177785182594726 8.052242977070371 >50 0.7163471149808721 8.298900865129827 >100 1.781119867878349 54.68839004947961 >500 0.01499679933661254 1.5075802985767006 >1k 0.00749839966830627 2.4796626177947094 >5k 9.99786622440836E-4 1.0118493231860177 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGC 7963 0.6156446254603032 TruSeq Adapter, Index 21 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5090 0.3935239411770618 No Hit ATCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTG 3666 0.2834300134292944 TruSeq Adapter, Index 21 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGC 3048 0.2356504857971875 TruSeq Adapter, Index 15 (95% over 21bp) ATGCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCT 3012 0.23286721234289004 No Hit ATTGCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTC 2503 0.19351481822518382 No Hit ATATCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTC 2442 0.18879871598317977 No Hit CTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGCT 2336 0.1806035219233038 TruSeq Adapter, Index 21 (95% over 23bp) ATGTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTC 2329 0.18006232986274598 No Hit ATGCCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTC 2128 0.16452238640958497 No Hit ATGGCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTC 2025 0.1565591318042338 No Hit ATTTCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTC 1935 0.1496009481684901 No Hit ATAGCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTC 1660 0.1283398315037176 No Hit ATCCTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCT 1600 0.12370104241322179 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1927416867101012 0.0 2 0.0 0.0 0.0 1.1178708576579837 0.0 3 0.0 0.0 0.0 1.5001843918663471 0.0 4 0.0 0.0 0.0 2.019883396304895 0.0 5 0.0 0.0 0.0 3.808291216994049 0.0 6 0.0 0.0 0.0 4.1934653378082185 0.0 7 0.0 0.0 0.0 4.870341979263067 0.0 8 0.0 0.0 0.0 6.937618337442528 0.0 9 0.0 0.0 0.0 7.194452626752979 0.0 10 0.0 0.0 0.0 7.70379166888942 0.0 11 0.0 0.0 0.0 8.106825127701997 0.0 12 0.0 0.0 0.0 9.199337271665271 0.0 13 7.731315150826361E-5 0.0 0.0 10.166834049639682 0.0 14 7.731315150826361E-5 0.0 0.0 10.564842153604223 0.0 15 1.5462630301652723E-4 0.0 0.0 10.747146564860708 0.0 16 1.5462630301652723E-4 0.0 0.0 10.856312734790377 0.0 17 1.5462630301652723E-4 0.0 0.0 10.999496691383682 0.0 18 1.5462630301652723E-4 0.0 0.0 11.384438872743326 0.0 19 1.5462630301652723E-4 0.0 0.0 11.851642247307764 0.0 20 2.3193945452479084E-4 0.0 0.0 12.388659397684162 0.0 21 3.0925260603305446E-4 0.0 0.0 12.758138948742154 0.0 22 3.0925260603305446E-4 0.0 0.0 13.183670534643637 0.0 23 3.865657575413181E-4 0.0 0.0 13.80333544398237 0.0 24 3.865657575413181E-4 0.0 0.0 14.320869680178687 0.0 25 4.638789090495817E-4 0.0 0.0 14.858350709464135 0.0 26 6.185052120661089E-4 0.0 0.0 15.308931756454296 0.0 27 6.958183635743725E-4 0.0 0.0 15.702146445025324 0.0 28 7.731315150826362E-4 0.0 0.0 16.05631799208468 0.0 29 7.731315150826362E-4 0.0 0.0 16.357066151451825 0.0 30 7.731315150826362E-4 0.0 0.0 16.66941128354521 0.0 31 7.731315150826362E-4 0.0 0.0 16.98013283945692 0.0 32 7.731315150826362E-4 0.0 0.0 17.35370998754485 0.0 33 7.731315150826362E-4 0.0 0.0 17.698217390665675 0.0 34 7.731315150826362E-4 0.0 0.0 18.03638511536282 0.0 35 7.731315150826362E-4 0.0 0.0 18.398056038118476 0.0 36 7.731315150826362E-4 0.0 0.0 18.796759960446593 0.0 37 8.504446665908998E-4 0.0 0.0 19.23311538755923 0.0 38 8.504446665908998E-4 0.0 0.0 19.617207124252285 0.0 39 8.504446665908998E-4 0.0 0.0 20.018771633186205 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCATAAT 25 3.8910774E-5 45.000004 37 GCATAAC 30 2.1657142E-6 45.000004 25 TCGCCAA 25 3.8910774E-5 45.000004 39 ACAACGA 25 3.8910774E-5 45.000004 15 AAGTATT 100 0.0 45.000004 17 CAGGTCG 25 3.8910774E-5 45.000004 20 GTGCAAC 30 2.1657142E-6 45.000004 12 CTAGACA 50 2.1827873E-11 45.000004 39 GGTACTC 25 3.8910774E-5 45.000004 17 CCTTACG 25 3.8910774E-5 45.000004 3 TCGTTAC 60 0.0 45.000004 2 CGAACGA 25 3.8910774E-5 45.000004 26 ACACGAG 25 3.8910774E-5 45.000004 40 TCCGCTA 30 2.1657142E-6 45.000004 2 CTCGTTT 25 3.8910774E-5 45.000004 35 GTCGAAC 25 3.8910774E-5 45.000004 24 AGTCAAT 45 3.8562575E-10 45.000004 32 CGTGCAT 25 3.8910774E-5 45.000004 23 TAGACGG 60 0.0 45.000004 4 CAGCCGA 25 3.8910774E-5 45.000004 28 >>END_MODULE