##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545567_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 899071 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.54864521266952 33.0 31.0 34.0 31.0 34.0 2 32.923747957614026 34.0 31.0 34.0 31.0 34.0 3 32.984634139016826 34.0 33.0 34.0 31.0 34.0 4 36.3704301440042 37.0 37.0 37.0 35.0 37.0 5 36.34752205331948 37.0 37.0 37.0 35.0 37.0 6 36.340097723094175 37.0 37.0 37.0 35.0 37.0 7 36.45160170887505 37.0 37.0 37.0 35.0 37.0 8 36.51507278068139 37.0 37.0 37.0 35.0 37.0 9 38.31436671853502 39.0 39.0 39.0 37.0 39.0 10 38.06192169472711 39.0 39.0 39.0 35.0 39.0 11 37.849066425232266 39.0 38.0 39.0 35.0 39.0 12 37.31598171890763 39.0 35.0 39.0 35.0 39.0 13 37.18303003878448 39.0 35.0 39.0 34.0 39.0 14 38.43457079585483 40.0 36.0 41.0 35.0 41.0 15 38.51466680606982 40.0 36.0 41.0 35.0 41.0 16 38.60006050690101 40.0 36.0 41.0 35.0 41.0 17 38.56688515145078 40.0 36.0 41.0 35.0 41.0 18 38.611229813885664 40.0 36.0 41.0 35.0 41.0 19 38.59261726826914 40.0 36.0 41.0 35.0 41.0 20 38.48399292158239 40.0 36.0 41.0 35.0 41.0 21 38.46103366697402 40.0 36.0 41.0 35.0 41.0 22 38.520143570418796 40.0 36.0 41.0 35.0 41.0 23 38.530844616276134 40.0 36.0 41.0 35.0 41.0 24 38.50747827479699 40.0 35.0 41.0 35.0 41.0 25 38.46227383599293 40.0 35.0 41.0 35.0 41.0 26 38.35878034104092 40.0 35.0 41.0 35.0 41.0 27 38.246335383968564 40.0 35.0 41.0 35.0 41.0 28 38.186707167732024 40.0 36.0 41.0 35.0 41.0 29 37.96947182146905 40.0 35.0 41.0 34.0 41.0 30 38.06420849966243 40.0 36.0 41.0 34.0 41.0 31 37.99386589045804 40.0 35.0 41.0 34.0 41.0 32 37.7276733428172 40.0 35.0 41.0 34.0 41.0 33 37.830882099411504 40.0 35.0 41.0 34.0 41.0 34 37.8359061742621 40.0 35.0 41.0 34.0 41.0 35 37.84132176435454 40.0 35.0 41.0 34.0 41.0 36 37.640366556145175 40.0 35.0 41.0 34.0 41.0 37 37.48396177832451 40.0 35.0 41.0 33.0 41.0 38 37.51083618535132 39.0 35.0 41.0 33.0 41.0 39 37.5520298174449 40.0 35.0 41.0 34.0 41.0 40 37.46817770787847 40.0 35.0 41.0 33.0 41.0 41 37.39622009830147 39.0 35.0 41.0 33.0 41.0 42 37.34973433688774 39.0 35.0 41.0 33.0 41.0 43 37.257927349452935 39.0 35.0 41.0 33.0 41.0 44 37.11429019510139 39.0 35.0 41.0 33.0 41.0 45 37.01564503804482 39.0 35.0 41.0 33.0 41.0 46 37.0707307876686 39.0 35.0 41.0 33.0 41.0 47 37.05514247484348 39.0 35.0 41.0 33.0 41.0 48 36.98650495900769 39.0 35.0 41.0 33.0 41.0 49 36.98201031954095 39.0 35.0 41.0 33.0 41.0 50 36.89498270993058 39.0 35.0 41.0 33.0 41.0 51 36.7883548685254 38.0 35.0 41.0 32.0 41.0 52 36.41289953741139 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 3.0 13 5.0 14 7.0 15 5.0 16 23.0 17 40.0 18 75.0 19 172.0 20 295.0 21 438.0 22 747.0 23 1225.0 24 1852.0 25 2617.0 26 3246.0 27 4154.0 28 5321.0 29 6958.0 30 8804.0 31 11587.0 32 15272.0 33 21303.0 34 50332.0 35 137514.0 36 46889.0 37 62565.0 38 113876.0 39 403182.0 40 560.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.014296979882566 13.745744218198563 47.714474162774685 12.525484639144183 2 23.979752433345087 14.057065571017194 49.380416007189645 12.582765988448074 3 23.702466212345854 14.284633805339068 45.88247201833893 16.13042796397615 4 20.00242472507733 15.360188461200504 50.5925560940126 14.044830719709566 5 23.549975474684423 16.23542523337979 45.41343230957288 14.801166982362906 6 22.002044332427584 17.18151291722233 46.526136423041116 14.290306327308965 7 81.65172717171392 2.4396293507409315 8.941563013377142 6.967080464168013 8 84.55071957609577 2.3892440085377014 8.805200034257583 4.2548363811089445 9 75.6108249515333 4.059412437949839 11.341262258486816 8.98850035203004 10 42.36873394870928 24.004444587802297 15.235837881546619 18.390983581941807 11 35.39242173310006 19.54906787116924 29.53203918266744 15.526471213063262 12 32.48219551069938 24.483049725772492 24.19608684964814 18.838667913879995 13 19.587107136143864 32.98927448444005 33.494907521208 13.928710858208085 14 13.778889542650136 41.40240314724866 28.418222809989423 16.40048450011178 15 12.18157409147887 25.52946319033758 41.238233687884495 21.050729030299053 16 16.050122849029723 24.351691913096964 40.118522341394616 19.479662896478697 17 14.58027230329974 24.474151652094218 26.77830783108342 34.167268213522625 18 17.56045962999585 24.95131085309169 32.53246962698163 24.955759889930828 19 21.505865498942796 27.731958877552497 29.17789585027211 21.58427977323259 20 23.654082936720236 23.792336756496425 26.08025395102278 26.473326355760555 21 19.8143416927028 31.912162665684914 28.982138229350074 19.291357412262215 22 25.916306943500565 22.344508943120175 24.88602123747735 26.853162875901905 23 20.980434248240684 30.380025604207013 21.15950798101596 27.480032166536343 24 20.598706887442706 22.299351219202933 33.83592619492787 23.266015698426486 25 26.395468211075656 24.187744905574753 27.206416400929406 22.210370482420185 26 18.367403686694377 32.92843390566485 24.52576047942821 24.178401928212566 27 22.76371943928789 28.3187868366347 23.599026105835915 25.318467618241495 28 22.50656510998575 25.88794433365107 31.374274111833216 20.231216444529963 29 17.32010041476146 22.400121903609392 34.63007927071388 25.649698410915267 30 22.71956274865945 32.019050775745185 27.258136454184374 18.00325002141099 31 25.187109805565967 25.428358828168186 27.716720926378454 21.667810439887393 32 24.128127811930312 25.461726604461717 29.534708604770927 20.875436978837044 33 23.22530701134838 29.568966188432285 22.700098212488225 24.505628587731113 34 17.68981537609377 27.353123390699956 29.435606309179143 25.521454924027136 35 19.98663064429839 24.179402961501374 33.60157317942632 22.232393214773914 36 24.277837901567285 24.492059025371745 25.069432781170786 26.160670291890188 37 21.4078754625608 32.311463721997484 27.646648596162038 18.63401221927968 38 17.325105581205488 27.814266059076537 33.816572884677626 21.044055475040345 39 17.583928299322302 30.741064943703 27.902913118096347 23.772093638878353 40 24.87923645629767 22.18734671677765 29.322489547544077 23.610927279380604 41 20.321976796048364 24.40641506621835 28.531673249387424 26.739934888345857 42 20.526298812885745 26.69700168284819 24.34991229836131 28.426787205904763 43 20.693026468432414 22.291454178813463 28.85534067943466 28.160178673319457 44 27.164929132404446 23.75029335836658 24.921947209953384 24.162830299275587 45 18.1300475713264 27.833508143405805 27.433094827883448 26.603349457384347 46 20.527744749858464 26.45553020840401 26.61135772369479 26.40536731804273 47 21.595513591251414 23.900448351687466 31.434224883240592 23.069813173820535 48 19.77952797943655 20.39482977428924 37.55921389968089 22.26642834659332 49 19.64550074465754 19.779861657199486 29.961260011723212 30.61337758641976 50 17.741201751585802 23.97674933347867 34.3494562720853 23.93259264285023 51 21.923185154453876 24.138138144818374 28.513098520584023 25.425578180143727 52 18.55671020419967 21.19209717586264 31.76311993157381 28.48807268836388 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 470.0 1 361.0 2 252.0 3 217.0 4 182.0 5 198.0 6 214.0 7 315.5 8 417.0 9 589.5 10 762.0 11 884.0 12 1006.0 13 1104.0 14 1074.5 15 947.0 16 968.0 17 989.0 18 951.0 19 913.0 20 995.0 21 1077.0 22 1587.5 23 2098.0 24 2100.0 25 2102.0 26 3057.0 27 4012.0 28 4354.5 29 4697.0 30 6823.5 31 8950.0 32 11772.0 33 14594.0 34 16038.0 35 17482.0 36 19703.0 37 21924.0 38 25306.5 39 40027.0 40 51365.0 41 66814.0 42 82263.0 43 94047.0 44 105831.0 45 120052.5 46 134274.0 47 131946.5 48 129619.0 49 108603.5 50 87588.0 51 69577.0 52 51566.0 53 45599.0 54 39632.0 55 34546.5 56 29461.0 57 24565.0 58 19669.0 59 17871.0 60 16073.0 61 13948.5 62 11824.0 63 10760.5 64 7740.5 65 5784.0 66 4614.5 67 3445.0 68 3197.5 69 2950.0 70 2558.0 71 2166.0 72 1473.0 73 780.0 74 850.0 75 920.0 76 677.5 77 435.0 78 350.0 79 265.0 80 261.5 81 258.0 82 206.0 83 154.0 84 96.0 85 38.0 86 25.5 87 13.0 88 11.5 89 9.5 90 9.0 91 6.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 899071.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.441482983304926 #Duplication Level Percentage of deduplicated Percentage of total 1 62.92083752529635 10.974327169927504 2 13.344653708604493 4.6550110115344445 3 6.504898068355629 3.403652069020733 4 3.8829808991099517 2.708997811052971 5 2.490158614485369 2.1716029550138365 6 1.7534566861600667 1.834973097217383 7 1.2801480175268096 1.562937590466377 8 0.9310738924252793 1.299144756074799 9 0.7093417878970205 1.1134775450657677 >10 4.1710518036185 14.217324970867939 >50 0.768464106153238 9.713560194356601 >100 1.2218898152610822 39.12141401411576 >500 0.01084140232747307 1.341650116963773 >1k 0.008290484132773522 3.8418666091799634 >5k 0.001913188646024659 2.0400600891421456 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCTT 7726 0.859331465479367 Illumina Single End Adapter 2 (95% over 21bp) TTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 5375 0.597839325259073 No Hit TGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 5240 0.5828238259269847 No Hit GTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 4677 0.5202036324161273 No Hit GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCT 4554 0.5065228441357802 No Hit GCCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 3822 0.4251054699795678 No Hit ATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 3678 0.4090889373586736 No Hit GGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 3291 0.3660445059400203 No Hit CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCT 2531 0.2815128059964118 No Hit TCCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 2264 0.25181548509517043 No Hit CTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 2173 0.24169392628613312 No Hit AGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 1875 0.20854860183456034 No Hit ACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 1863 0.20721389078281913 No Hit TCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCT 1504 0.167283785151562 No Hit GACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 1175 0.13069045714965782 No Hit TACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 1133 0.12601896846856367 No Hit CGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 952 0.10588707677146743 No Hit TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAAT 916 0.10188294361624388 No Hit AACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 912 0.10143803993233015 No Hit CCCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 910 0.10121558809037329 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8920318862470261 0.0 2 0.0 0.0 0.0 1.9357759287086338 0.0 3 0.0 0.0 0.0 6.4747945379174725 0.0 4 0.0 0.0 0.0 7.410426985188044 0.0 5 0.0 0.0 0.0 8.953130509158898 0.0 6 0.0 0.0 0.0 13.823602362883465 0.0 7 0.0 0.0 0.0 14.379175838170735 0.0 8 0.0 0.0 0.0 15.583641336446176 0.0 9 0.0 0.0 0.0 16.357662520535087 0.0 10 1.1122592097843218E-4 0.0 0.0 18.69340686108216 0.0 11 1.1122592097843218E-4 0.0 0.0 20.8828891155426 0.0 12 1.1122592097843218E-4 0.0 0.0 21.773808742579842 0.0 13 1.1122592097843218E-4 0.0 0.0 22.192908012826575 0.0 14 1.1122592097843218E-4 0.0 0.0 22.374873619547287 0.0 15 1.1122592097843218E-4 0.0 0.0 22.65772113659544 0.0 16 1.1122592097843218E-4 0.0 0.0 23.43107496515848 0.0 17 1.1122592097843218E-4 0.0 0.0 24.553789411514774 0.0 18 1.1122592097843218E-4 0.0 0.0 25.736232177436488 0.0 19 6.673555258705931E-4 0.0 0.0 26.443072905254425 0.0 20 6.673555258705931E-4 0.0 0.0 27.26692330194167 0.0 21 6.673555258705931E-4 0.0 0.0 28.40498692539299 0.0 22 6.673555258705931E-4 0.0 0.0 29.382440318951453 0.0 23 6.673555258705931E-4 0.0 0.0 30.47011860019954 0.0 24 8.898073678274575E-4 0.0 0.0 31.250813339547154 0.0 25 0.0011122592097843218 0.0 0.0 31.95353870828889 0.0 26 0.0011122592097843218 0.0 0.0 32.606657316274244 0.0 27 0.0011122592097843218 0.0 0.0 33.163343050771296 0.0 28 0.0011122592097843218 0.0 0.0 33.80500538889587 0.0 29 0.0011122592097843218 0.0 0.0 34.39038741100536 0.0 30 0.0011122592097843218 0.0 0.0 35.07542785831152 0.0 31 0.0011122592097843218 0.0 0.0 35.69495623816139 0.0 32 0.0011122592097843218 0.0 0.0 36.26243088699335 0.0 33 0.0011122592097843218 0.0 0.0 36.79486937071711 0.0 34 0.0011122592097843218 0.0 0.0 37.33008850246532 0.0 35 0.001223485130762754 0.0 0.0 38.02469437897563 0.0 36 0.001223485130762754 0.0 0.0 38.587163861363564 0.0 37 0.001223485130762754 0.0 0.0 39.15052315111932 0.0 38 0.001223485130762754 0.0 0.0 39.69797713417517 0.0 39 0.001223485130762754 0.0 0.0 40.232862588160444 0.0 40 0.001223485130762754 0.0 0.0 40.77186340122193 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGTCGA 35 1.0192343E-7 46.000004 11 GTCGCGT 35 1.0192343E-7 46.000004 18 TCGCAAT 35 1.0192343E-7 46.000004 30 CGTATTG 55 1.8189894E-12 46.000004 1 GCGACGT 35 1.0192343E-7 46.000004 17 GCGACGA 35 1.0192343E-7 46.000004 10 CTGTATT 35 1.0192343E-7 46.000004 33 GGTAATC 110 0.0 46.000004 8 CGAGTCG 35 1.0192343E-7 46.000004 15 CAACGGA 55 1.8189894E-12 46.000004 37 ACTGACG 55 1.8189894E-12 46.000004 1 CGTGCCC 35 1.0192343E-7 46.000004 20 ATAATCG 35 1.0192343E-7 46.000004 27 ATTACGC 35 1.0192343E-7 46.000004 13 GCTATCA 35 1.0192343E-7 46.000004 9 CTCCCGG 35 1.0192343E-7 46.000004 23 TTCACGA 35 1.0192343E-7 46.000004 26 GCTGCGA 35 1.0192343E-7 46.000004 31 CCTACCG 35 1.0192343E-7 46.000004 38 ATTCGCT 35 1.0192343E-7 46.000004 16 >>END_MODULE