##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545566_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1238591 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.956918789172537 31.0 31.0 34.0 31.0 34.0 2 32.59189030115672 34.0 31.0 34.0 31.0 34.0 3 32.57185705370053 34.0 31.0 34.0 31.0 34.0 4 36.04143417802971 37.0 35.0 37.0 35.0 37.0 5 35.83719323004931 37.0 35.0 37.0 35.0 37.0 6 35.84831877512431 37.0 35.0 37.0 35.0 37.0 7 35.83618401877617 37.0 35.0 37.0 35.0 37.0 8 35.80418636983475 37.0 35.0 37.0 35.0 37.0 9 37.93158274200281 39.0 38.0 39.0 35.0 39.0 10 37.87060942635624 39.0 38.0 39.0 35.0 39.0 11 37.70083102493075 39.0 38.0 39.0 35.0 39.0 12 37.24804798355551 39.0 37.0 39.0 34.0 39.0 13 37.01810928708508 39.0 37.0 39.0 33.0 39.0 14 37.73822512839186 40.0 36.0 41.0 33.0 41.0 15 37.6092406613644 40.0 36.0 41.0 33.0 41.0 16 37.61280681031914 40.0 35.0 41.0 33.0 41.0 17 37.715383851489314 40.0 35.0 41.0 33.0 41.0 18 37.77890522375829 40.0 35.0 41.0 33.0 41.0 19 37.737452476241145 40.0 35.0 41.0 33.0 41.0 20 37.690807538566 40.0 35.0 41.0 33.0 41.0 21 37.66905782457648 40.0 35.0 41.0 33.0 41.0 22 37.58464900842974 40.0 35.0 41.0 33.0 41.0 23 37.495432309777804 39.0 35.0 41.0 33.0 41.0 24 37.43466002901684 39.0 35.0 41.0 32.0 41.0 25 37.38107091041353 39.0 35.0 41.0 32.0 41.0 26 37.28202045711619 39.0 35.0 41.0 32.0 41.0 27 37.173396221997415 39.0 35.0 41.0 32.0 41.0 28 37.07379917987455 39.0 35.0 41.0 32.0 41.0 29 37.00453499177695 39.0 35.0 41.0 32.0 41.0 30 36.9138432299282 39.0 35.0 41.0 31.0 41.0 31 36.818894211244874 39.0 35.0 41.0 31.0 41.0 32 36.706820895679044 39.0 35.0 41.0 31.0 41.0 33 36.62128660712051 39.0 35.0 41.0 31.0 41.0 34 36.502191603200735 39.0 35.0 41.0 31.0 41.0 35 36.423690306162406 38.0 35.0 41.0 30.0 41.0 36 36.313575667835465 38.0 35.0 41.0 30.0 41.0 37 36.165223225423084 38.0 35.0 41.0 30.0 41.0 38 36.07684134633628 38.0 35.0 41.0 30.0 41.0 39 35.99810268280651 38.0 35.0 40.0 30.0 41.0 40 35.89180528519907 38.0 35.0 40.0 30.0 41.0 41 35.84083688642982 38.0 35.0 40.0 29.0 41.0 42 35.698094851327035 38.0 35.0 40.0 29.0 41.0 43 35.60163120836499 37.0 35.0 40.0 29.0 41.0 44 35.47905482923741 37.0 34.0 40.0 29.0 41.0 45 35.46077518728943 37.0 34.0 40.0 29.0 41.0 46 35.418000776689 37.0 34.0 40.0 29.0 41.0 47 35.33312933809466 37.0 34.0 40.0 28.0 41.0 48 35.25287443554814 37.0 34.0 40.0 28.0 41.0 49 35.194104429953065 36.0 34.0 40.0 28.0 41.0 50 35.10382684841082 36.0 34.0 40.0 28.0 41.0 51 34.936550483573676 36.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 14.0 11 15.0 12 18.0 13 28.0 14 34.0 15 47.0 16 90.0 17 160.0 18 308.0 19 740.0 20 1102.0 21 1867.0 22 2974.0 23 4470.0 24 6493.0 25 9318.0 26 12461.0 27 15090.0 28 17339.0 29 20060.0 30 24251.0 31 29849.0 32 36853.0 33 48181.0 34 78991.0 35 155448.0 36 92301.0 37 125111.0 38 186849.0 39 367911.0 40 215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.1570478067416925 90.95932394147866 3.1744942438625827 3.709134007917061 2 3.7138974851262443 2.7169582210753997 90.8080229874107 2.7611213063876616 3 28.77277487080077 15.435280895792072 42.131583387898026 13.660360845509132 4 26.719473982937064 15.853094362868775 43.950989471100634 13.476442183093532 5 25.020123672786255 14.382956117071737 46.19571755325204 14.401202656889966 6 23.204673697774325 14.689594870300205 47.30996753569177 14.795763896233705 7 22.338447477819553 17.644726951834784 45.44405699702323 14.572768573322428 8 26.1513284046146 19.09750676373395 43.70934392386187 11.041820907789578 9 82.53491265478273 4.401614415089404 9.176556264335845 3.8869166657920164 10 83.27841878392464 4.364394703336291 8.830679376808002 3.52650713593107 11 77.3310156460042 6.712788967463836 10.22718556811732 5.729009818414634 12 44.09793063246867 22.802523189656636 16.080530215381835 17.019015962492865 13 35.93324995902602 25.066708865154038 21.794845917659664 17.20519525816028 14 30.858209045601008 23.736406933362183 25.663435306731603 19.741948714305206 15 23.034883993182575 27.06962992626299 30.43668168103918 19.458804399515255 16 18.818964452349483 33.12990325297051 28.806603632676165 19.24452866200384 17 18.082805381275982 24.029401150177904 38.52474303462564 19.363050433920478 18 21.544319311217343 20.776188427011014 36.580840648769446 21.098651613002193 19 22.73155545292998 19.676471086904392 29.516200263040826 28.075773197124796 20 23.498394546706702 22.38043066678185 30.966800178590027 23.154374607921422 21 27.64383077222424 24.006794817659742 26.644711611823436 21.704662798292578 22 29.238707531380413 22.51873297965188 26.327092639943288 21.915466849024416 23 27.16643347158182 23.9508441446773 27.77389792110551 21.108824462635365 24 29.22587036398617 20.67954635549588 24.94423098504672 25.150352295471222 25 26.858906612432996 24.53279573321621 24.61886127058892 23.989436383761873 26 26.08084508929905 21.867266918619624 30.462840437238764 21.58904755484256 27 26.897902536026823 22.55466090097538 27.762594754846436 22.78484180815136 28 23.423389964887523 27.164253575231857 26.46571790042072 22.946638559459902 29 23.047156002263865 27.266062808465424 26.504148665701592 23.18263252356912 30 22.222751497467687 25.95328078437515 30.525976694485912 21.297991023671255 31 22.651625920097917 24.761361902355176 28.471464753094445 24.115547424452462 32 21.9622135151959 27.77769255549249 28.256462383466374 22.00363154584524 33 27.06720781920747 25.292126295120827 25.382147940684213 22.258517944987492 34 27.36730688338604 25.29802008895592 25.702673441030978 21.631999586627064 35 27.19549875624803 26.292456509049394 23.309147248768962 23.20289748593361 36 24.961185734435336 25.539827109998374 25.646803504950384 23.852183650615903 37 23.61457494846967 25.179175369431878 28.618728862069887 22.587520820028566 38 27.00730103803435 25.917595073757198 24.227771718024755 22.8473321701837 39 25.48662149167885 27.973237331774577 25.242634574286427 21.29750660226015 40 25.366404244823354 26.940773830909475 25.437533455353705 22.255288468913466 41 24.161163773998034 26.580606511754084 24.681997527836067 24.57623218641182 42 25.88126346792444 23.813833622236878 27.27978808178002 23.02511482805866 43 22.793480656649372 24.41637312074769 27.622354756331998 25.16779146627095 44 23.02584146017531 25.702511967227277 25.759027798522677 25.512618774074735 45 22.989671328146258 24.426465233479007 26.97444111898116 25.60942231939357 46 24.780092863584507 24.042480528277697 27.217701404256932 23.95972520388086 47 22.505815075355788 26.908075385659995 26.053878964080962 24.53223057490326 48 23.191109898263427 26.587065463902128 24.846135649298276 25.375688988536165 49 23.20661138341874 25.699040280447704 27.760899279907576 23.333449056225987 50 23.091076876870574 23.012116186860716 30.511282578349107 23.385524357919603 51 22.95051393074873 24.391506154977712 27.20470276305899 25.453277151214564 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 533.0 1 1238.0 2 1943.0 3 4018.0 4 6093.0 5 4379.0 6 2665.0 7 2593.0 8 2521.0 9 2640.5 10 2760.0 11 3038.5 12 3317.0 13 3282.0 14 3247.0 15 3039.0 16 2831.0 17 3275.5 18 3720.0 19 3798.0 20 3876.0 21 4562.5 22 5249.0 23 6184.0 24 7119.0 25 8280.0 26 10161.0 27 10881.0 28 12169.5 29 13458.0 30 16313.5 31 19169.0 32 23633.5 33 28098.0 34 28954.5 35 29811.0 36 34719.0 37 39627.0 38 46912.5 39 54198.0 40 65297.0 41 76396.0 42 87894.5 43 99393.0 44 108940.0 45 118487.0 46 114263.5 47 110040.0 48 96685.0 49 83330.0 50 80622.0 51 77914.0 52 72614.0 53 67314.0 54 66069.5 55 64825.0 56 67591.5 57 70358.0 58 66250.5 59 62143.0 60 55430.5 61 48718.0 62 41704.0 63 34690.0 64 29131.0 65 23572.0 66 18843.0 67 14114.0 68 13751.5 69 13389.0 70 11476.5 71 9564.0 72 8054.5 73 6545.0 74 4957.0 75 2815.0 76 2261.0 77 1668.0 78 1075.0 79 713.0 80 351.0 81 233.5 82 116.0 83 71.5 84 27.0 85 22.0 86 17.0 87 15.5 88 14.0 89 9.0 90 4.0 91 3.0 92 2.0 93 2.5 94 3.0 95 2.5 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1238591.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.787811381673924 #Duplication Level Percentage of deduplicated Percentage of total 1 74.07743924303033 11.695206384063727 2 10.886188485858806 3.4373818096017854 3 4.182758485545171 1.981098060746497 4 2.145253156545413 1.3547540880591833 5 1.2360701481592224 0.9757421176827772 6 0.7528847285761371 0.7131841252141693 7 0.5170904510451036 0.5714608555855353 8 0.37172273175668963 0.4694950700204151 9 0.2965171066585 0.4213220536227678 >10 2.5060913488545253 8.993986829206312 >50 1.1261309946060185 13.265266184909526 >100 1.8874878948314948 53.78818716924339 >500 0.010260874666113046 1.093073096532628 >1k 0.004104349866445219 1.2398421555112957 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC 3348 0.27030714739571016 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3257 0.2629600893273082 No Hit ATCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTG 2014 0.16260412032704905 No Hit CTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGCT 1673 0.1350728367960045 No Hit ATGCCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTC 1355 0.10939850200752306 No Hit ATGCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCT 1249 0.1008403904113626 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14742558277914178 0.0 2 0.0 0.0 0.0 0.5656427343650972 0.0 3 0.0 0.0 0.0 0.792190480957798 0.0 4 8.073690185057052E-5 0.0 0.0 1.0352085555280153 0.0 5 8.073690185057052E-5 0.0 0.0 1.8975594041939592 0.0 6 8.073690185057052E-5 0.0 0.0 2.097948394587075 0.0 7 8.073690185057052E-5 0.0 0.0 2.4755548845421935 0.0 8 8.073690185057052E-5 0.0 0.0 3.5807623339746533 0.0 9 8.073690185057052E-5 0.0 0.0 3.715512223163256 0.0 10 8.073690185057052E-5 0.0 0.0 3.9890488466329885 0.0 11 8.073690185057052E-5 0.0 0.0 4.192021417885323 0.0 12 8.073690185057052E-5 0.0 0.0 4.822334410632727 0.0 13 1.6147380370114104E-4 0.0 0.0 5.3480123785817915 0.0 14 1.6147380370114104E-4 0.0 0.0 5.57843549646332 0.0 15 1.6147380370114104E-4 0.0 0.0 5.705353906172417 0.0 16 2.422107055517116E-4 0.0 0.0 5.7831035426545165 0.0 17 2.422107055517116E-4 0.0 0.0 5.901544577669303 0.0 18 2.422107055517116E-4 0.0 0.0 6.15731908273191 0.0 19 2.422107055517116E-4 0.0 0.0 6.458144779027137 0.0 20 3.229476074022821E-4 0.0 0.0 6.826950946680543 0.0 21 4.0368450925285264E-4 0.0 0.0 7.040419315173451 0.0 22 4.0368450925285264E-4 0.0 0.0 7.28513286468253 0.0 23 4.0368450925285264E-4 0.0 0.0 7.673638836387476 0.0 24 4.0368450925285264E-4 0.0 0.0 7.9969093913971605 0.0 25 4.844214111034232E-4 0.0 0.0 8.345935018097176 0.0 26 0.0025028439573676863 0.0 0.0 8.623185539052036 0.0 27 0.0025835808592182567 0.0 0.0 8.869190878990723 0.0 28 0.0026643177610688276 0.0 0.0 9.10211684082962 0.0 29 0.0026643177610688276 0.0 0.0 9.30735004533377 0.0 30 0.0026643177610688276 0.0 0.0 9.53236379079131 0.0 31 0.002906528466620539 0.0 0.0 9.757781220758103 0.0 32 0.002906528466620539 0.0 0.0 10.01202172468555 0.0 33 0.002906528466620539 0.0 0.0 10.270944968920329 0.0 34 0.0029872653684711093 0.0 0.0 10.533501373738385 0.0 35 0.0029872653684711093 0.0 0.0 10.803404836624843 0.0 36 0.0029872653684711093 0.0 0.0 11.053124074048657 0.0 37 0.0029872653684711093 0.0 0.0 11.341274076753344 0.0 38 0.00306800227032168 0.0 0.0 11.604799324393605 0.0 39 0.00306800227032168 0.0 0.0 11.871634785009741 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAA 20 7.033498E-4 45.000004 13 CCTTACG 20 7.033498E-4 45.000004 27 ACACGGT 20 7.033498E-4 45.000004 30 CCCTCGA 20 7.033498E-4 45.000004 22 CGTGCTA 20 7.033498E-4 45.000004 37 GCAACTA 20 7.033498E-4 45.000004 43 GACGTAA 20 7.033498E-4 45.000004 18 ATTCGTC 40 6.8157533E-9 45.000004 1 CGACACG 20 7.033498E-4 45.000004 36 TAGCCCG 20 7.033498E-4 45.000004 26 CTAACGG 20 7.033498E-4 45.000004 4 CCGTAGA 20 7.033498E-4 45.000004 3 TACGCAC 20 7.033498E-4 45.000004 25 CTACGTC 20 7.033498E-4 45.000004 36 CTAGTAA 20 7.033498E-4 45.000004 39 CTACGGT 20 7.033498E-4 45.000004 5 GGACGTA 20 7.033498E-4 45.000004 17 CCGACAC 20 7.033498E-4 45.000004 37 CGTCGGT 40 6.8157533E-9 45.000004 22 CGAGAAT 40 6.8157533E-9 45.000004 40 >>END_MODULE