##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545564_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2810815 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26052977517197 31.0 31.0 33.0 30.0 34.0 2 31.600074711427112 31.0 31.0 34.0 30.0 34.0 3 31.70147056992367 31.0 31.0 34.0 30.0 34.0 4 35.40902656347003 37.0 35.0 37.0 33.0 37.0 5 35.2704870295626 37.0 35.0 37.0 33.0 37.0 6 35.34192075963733 37.0 35.0 37.0 32.0 37.0 7 35.8081485263171 37.0 35.0 37.0 35.0 37.0 8 35.826122672605635 37.0 35.0 37.0 35.0 37.0 9 37.49069682636531 39.0 37.0 39.0 35.0 39.0 10 36.845785652915616 39.0 37.0 39.0 32.0 39.0 11 36.50022360062829 39.0 35.0 39.0 32.0 39.0 12 35.778048003870765 37.0 35.0 39.0 31.0 39.0 13 35.45961082461848 37.0 35.0 39.0 30.0 39.0 14 36.41333492243353 38.0 35.0 41.0 31.0 41.0 15 36.61618462972483 38.0 35.0 41.0 31.0 41.0 16 36.76637914626185 38.0 35.0 41.0 32.0 41.0 17 36.701084916652285 38.0 35.0 40.0 31.0 41.0 18 36.640243843867346 38.0 35.0 40.0 31.0 41.0 19 36.604217282176165 38.0 35.0 40.0 31.0 41.0 20 36.46798597559783 38.0 35.0 40.0 31.0 41.0 21 36.278543767554964 38.0 35.0 40.0 31.0 41.0 22 36.20699690303346 38.0 35.0 40.0 30.0 41.0 23 36.127356656343444 38.0 34.0 40.0 30.0 41.0 24 36.08364726956417 37.0 34.0 40.0 30.0 41.0 25 35.9519039851431 37.0 34.0 40.0 30.0 41.0 26 35.86672762170402 37.0 34.0 40.0 30.0 41.0 27 35.80219117942661 37.0 34.0 40.0 30.0 41.0 28 35.77744390861725 37.0 34.0 40.0 30.0 41.0 29 35.76033072258402 37.0 34.0 40.0 30.0 41.0 30 35.664385952117094 37.0 34.0 40.0 29.0 41.0 31 35.5126865339768 37.0 34.0 40.0 29.0 41.0 32 35.352823291465285 37.0 34.0 40.0 29.0 41.0 33 35.198036512541734 37.0 34.0 40.0 27.0 41.0 34 35.0219907749176 37.0 34.0 40.0 27.0 41.0 35 34.88495863299435 36.0 34.0 40.0 26.0 41.0 36 34.7071230230378 36.0 33.0 40.0 25.0 41.0 37 34.6326606340154 36.0 33.0 40.0 25.0 41.0 38 34.609713197062064 36.0 33.0 40.0 25.0 41.0 39 34.531309958143815 36.0 33.0 40.0 25.0 41.0 40 34.354024722367 36.0 33.0 40.0 24.0 41.0 41 34.31979692722573 36.0 33.0 40.0 24.0 41.0 42 34.237778011003925 36.0 33.0 40.0 24.0 41.0 43 34.15811072589267 35.0 33.0 40.0 23.0 41.0 44 34.10415093131352 35.0 33.0 40.0 23.0 41.0 45 34.065939949801034 35.0 33.0 40.0 23.0 41.0 46 34.03641008035036 35.0 33.0 40.0 23.0 41.0 47 33.98066895188762 35.0 33.0 40.0 23.0 41.0 48 33.918126948945414 35.0 33.0 40.0 23.0 41.0 49 33.84480337553343 35.0 33.0 39.0 24.0 41.0 50 33.73517929853085 35.0 33.0 39.0 24.0 41.0 51 33.57382574093279 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 4.0 13 5.0 14 40.0 15 104.0 16 291.0 17 794.0 18 1778.0 19 3489.0 20 5587.0 21 9122.0 22 13376.0 23 19090.0 24 26272.0 25 35896.0 26 46515.0 27 55046.0 28 61883.0 29 71293.0 30 84409.0 31 101602.0 32 124541.0 33 159170.0 34 259683.0 35 384563.0 36 207417.0 37 250217.0 38 342430.0 39 545851.0 40 346.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.74973806529423 22.963766736693806 27.346125589908976 13.940369608102987 2 31.79131319563899 25.053516506778283 29.637489482587792 13.51768081499494 3 29.90360447058949 25.022884821662046 31.124673804572694 13.948836903175769 4 26.857584010331525 27.3727726655792 30.020261027495582 15.749382296593692 5 23.641043611906156 32.36513253273517 29.03069038695183 14.96313346840685 6 21.081963772073227 41.29916056375108 27.144333582964368 10.474542081211322 7 85.81479037218742 5.104533738435293 7.102601914391378 1.9780739749859029 8 86.42813561191328 4.232509076548972 7.089651933691829 2.249703377845927 9 82.1739602215016 6.0144833437988625 8.46352392455569 3.348032510143855 10 47.08620097729662 25.413305393631386 14.906210476320926 12.594283152751071 11 40.56542319576351 22.923671604143284 21.29232980470077 15.218575395392438 12 37.55110172672339 21.734585876338357 25.47172261425957 15.242589782678689 13 22.999663798577995 35.53318165727733 25.715637635347754 15.751516908796914 14 17.74115336655027 38.64953758963148 28.22900119716168 15.380307846656574 15 16.8926805926395 24.563836467359113 42.70668827368574 15.836794666315642 16 18.48873013698874 20.369038873067062 41.59729473480112 19.54493625514308 17 18.75239032095673 20.240713102783356 29.604011647867257 31.402884928392655 18 21.385114281800828 24.36218676789472 33.849577435725934 20.403121514578512 19 28.246255979137725 25.02480597264494 26.43251156692988 20.296426481287455 20 30.13645508509098 23.431282386069523 26.004770858274203 20.4274916705653 21 23.472907324032356 27.296922778624705 28.14553786001569 21.084632037327253 22 22.878738017265455 24.76381405393098 25.819201904074085 26.538246024729485 23 20.862454483841873 29.31697746027398 25.571729195980524 24.248838859903625 24 20.43297050855357 24.85837737453372 36.080140457482976 18.62851165942974 25 20.187383374572857 25.332190129908945 33.42066269035849 21.059763805159715 26 19.375661507427562 31.47752520176532 27.28343914487435 21.863374145932763 27 19.14362916093731 32.45937566150743 27.780732634485016 20.61626254307025 28 17.34802895245685 28.35629523821383 35.011019935499135 19.28465587383019 29 18.24666511314334 25.300846907391627 33.88867641591496 22.563811563550075 30 19.61612557212054 30.314908665280356 30.495888203243542 19.57307755935556 31 27.189587361672686 27.61017711944756 25.26060946736089 19.939626051518864 32 28.217758906224706 26.193719615129417 26.341292472112183 19.247229006533694 33 26.606518038362537 27.77653456381868 25.44286977264601 20.17407762517277 34 20.25714961674817 27.308271800171834 28.05414088084773 24.38043770223227 35 20.844381433854593 26.078699594245798 30.378413378326215 22.698505593573394 36 28.67979571761215 26.467056707752022 25.744170285130824 19.108977289505003 37 21.29770191207888 32.358372927424966 27.135012443010304 19.208912717485855 38 21.528951567427953 32.47666602035353 24.392391530570315 21.601990881648206 39 21.68840709900865 30.85236844118165 26.105382246786075 21.353842213023626 40 23.98169214267036 26.62644108559261 26.921871414518566 22.46999535721846 41 18.89146030599666 25.817849983012042 27.35391692445074 27.93677278654056 42 21.744582976823448 26.92382814237152 25.474426456383647 25.857162424421386 43 21.749101239320268 25.92981039307105 27.219649816868063 25.101438550740625 44 19.766331117487276 28.646211152281452 29.12870466394978 22.458753066281485 45 18.997692839977017 33.93883980269068 24.963364718062202 22.100102639270105 46 21.530018873529563 32.46336027095344 26.56460848543928 19.44201237007772 47 21.879348160586876 28.39525191092263 27.062898127411444 22.662501801079046 48 22.23113225167789 25.987871844998693 29.592342434489645 22.18865346883377 49 21.023155205874453 25.94457479414334 31.498302093876685 21.533967906105524 50 20.095132550523605 31.214007325277542 27.411017800886935 21.27984232331192 51 19.667462995608034 31.758831513279954 25.85840761487327 22.71529787623874 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2505.0 1 4514.5 2 6524.0 3 13946.5 4 21369.0 5 16099.5 6 10830.0 7 11150.0 8 11470.0 9 12381.0 10 13292.0 11 13300.0 12 13308.0 13 13587.5 14 13867.0 15 13801.5 16 13736.0 17 13135.5 18 12535.0 19 12449.5 20 12364.0 21 12869.5 22 13375.0 23 14228.5 24 15082.0 25 16329.5 26 22495.5 27 27414.0 28 30627.5 29 33841.0 30 39949.0 31 46057.0 32 52609.5 33 59162.0 34 70348.5 35 81535.0 36 85005.0 37 88475.0 38 99713.5 39 110952.0 40 139170.0 41 167388.0 42 202103.5 43 236819.0 44 246276.0 45 255733.0 46 246651.5 47 237570.0 48 229555.5 49 221541.0 50 209384.5 51 197228.0 52 183879.0 53 170530.0 54 156264.5 55 141999.0 56 132057.5 57 122116.0 58 116334.0 59 110552.0 60 99367.0 61 88182.0 62 78725.5 63 69269.0 64 60797.5 65 52326.0 66 45062.5 67 37799.0 68 31875.5 69 25952.0 70 22839.5 71 19727.0 72 16452.5 73 13178.0 74 10723.0 75 6365.5 76 4463.0 77 3785.0 78 3107.0 79 1988.5 80 870.0 81 714.0 82 558.0 83 391.0 84 224.0 85 159.0 86 94.0 87 66.0 88 38.0 89 22.0 90 6.0 91 5.5 92 5.0 93 3.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2810815.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.994157137472017 #Duplication Level Percentage of deduplicated Percentage of total 1 80.34315780438833 12.850210908440985 2 7.489681055792473 2.395822714317843 3 2.572750240486604 1.2344691486543502 4 1.3969841649295378 0.8937433700977262 5 0.8970130607150512 0.7173483923720628 6 0.6684817833262054 0.6415081611634111 7 0.46983702500121355 0.5260253044810246 8 0.3703657740709932 0.473895071106634 9 0.27899754637740837 0.40160975379564656 >10 2.6220732108450386 9.887969832086728 >50 1.1780607699158676 13.794104213881967 >100 1.69240712930195 52.911089578701095 >500 0.015703671549480956 1.6639095493871554 >1k 0.0040380869698665315 0.9105521021887272 >5k 2.2433816499258508E-4 0.29124606586538593 >10k+ 2.2433816499258508E-4 0.40649583345927764 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11329 0.4030503608384045 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8117 0.28877745422590956 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3090 0.10993252846594316 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05048357860620496 0.0 2 0.0 0.0 0.0 0.1578189955582278 0.0 3 0.0 0.0 0.0 0.21502660260458265 0.0 4 0.0 0.0 0.0 0.3281254725053054 0.0 5 0.0 0.0 0.0 0.529739595099642 0.0 6 3.5576870053703284E-5 0.0 0.0 0.7219614239998008 0.0 7 3.5576870053703284E-5 0.0 0.0 0.8349535632903624 0.0 8 3.5576870053703284E-5 0.0 0.0 1.0782637775876391 0.0 9 3.5576870053703284E-5 0.0 0.0 1.1588098113892233 0.0 10 3.5576870053703284E-5 0.0 0.0 1.308481703705153 0.0 11 3.5576870053703284E-5 0.0 0.0 1.4983198823117139 0.0 12 3.5576870053703284E-5 0.0 0.0 1.6543956112373102 0.0 13 3.5576870053703284E-5 0.0 0.0 1.7154810971195187 0.0 14 3.5576870053703284E-5 0.0 0.0 1.7363291429709888 0.0 15 3.5576870053703284E-5 0.0 0.0 1.77457427827872 0.0 16 3.5576870053703284E-5 0.0 0.0 1.8625914547915818 0.0 17 3.5576870053703284E-5 0.0 0.0 1.9700691792238194 0.0 18 7.115374010740657E-5 0.0 0.0 2.116041077054164 0.0 19 7.115374010740657E-5 0.0 0.0 2.1888669300540946 0.0 20 1.0673061016110986E-4 0.0 0.0 2.2608389381727365 0.0 21 1.4230748021481314E-4 0.0 0.0 2.356825333577628 0.0 22 1.4230748021481314E-4 0.0 0.0 2.461243447185247 0.0 23 1.4230748021481314E-4 0.0 0.0 2.583094227119181 0.0 24 1.4230748021481314E-4 0.0 0.0 2.680752735416596 0.0 25 1.4230748021481314E-4 0.0 0.0 2.7554285856593195 0.0 26 1.4230748021481314E-4 0.0 0.0 2.832701547415963 0.0 27 1.4230748021481314E-4 0.0 0.0 2.908587011240512 0.0 28 1.7788435026851643E-4 0.0 0.0 2.993224385098272 0.0 29 2.1346122032221972E-4 0.0 0.0 3.0875386676106396 0.0 30 2.49038090375923E-4 0.0 0.0 3.199001001488892 0.0 31 2.49038090375923E-4 0.0 0.0 3.305696034779948 0.0 32 2.846149604296263E-4 0.0 0.0 3.4074103062634857 0.0 33 2.846149604296263E-4 0.0 0.0 3.5093736158373994 0.0 34 2.846149604296263E-4 0.0 0.0 3.6154994192075964 0.0 35 2.846149604296263E-4 0.0 0.0 3.7422242303388873 0.0 36 2.846149604296263E-4 0.0 0.0 3.855109639019288 0.0 37 3.2019183048332956E-4 0.0 0.0 3.9685998544906016 0.0 38 3.2019183048332956E-4 0.0 0.0 4.080524687679552 0.0 39 3.2019183048332956E-4 0.0 0.0 4.206609115149877 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGTAG 60 0.0 45.000004 1 ACTACGC 30 2.1666256E-6 45.000004 10 CATACGT 45 3.8562575E-10 45.000004 15 TACGTCC 30 2.1666256E-6 45.000004 16 TAATGCG 140 0.0 45.0 1 CTAACGC 25 3.8922517E-5 44.999996 20 ATCGGGT 100 0.0 42.749996 4 TACAAGG 610 0.0 42.049183 2 CGGTCTA 280 0.0 41.785713 31 TCACGAC 295 0.0 41.186436 25 TACGCGG 115 0.0 41.086956 2 CTCACGA 300 0.0 40.500004 24 CGTATGG 280 0.0 40.17857 2 GATCGAC 90 0.0 40.000004 10 ATTACGC 45 1.9299478E-8 40.000004 12 AGGGCGA 1970 0.0 39.860405 6 ACGGTCT 300 0.0 39.750004 30 ATACTAT 2125 0.0 39.600002 45 TAGGGCG 940 0.0 39.494682 5 ATAGCGG 610 0.0 39.467213 2 >>END_MODULE