SRR1545561_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545561_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1385305
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5237	0.37803949310801593	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4712	0.3401417016469297	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAATACG	30	2.1658252E-6	45.000004	18
ACGTTAG	35	1.2121745E-7	45.000004	1
GACGTAT	30	2.1658252E-6	45.000004	11
TACGACT	30	2.1658252E-6	45.000004	21
TAGGCCC	30	2.1658252E-6	45.000004	35
CGACTCA	30	2.1658252E-6	45.000004	23
GGTTCGA	30	2.1658252E-6	45.000004	38
TACGTAA	35	1.2121745E-7	45.000004	18
ACACGGC	55	1.8189894E-12	45.0	31
GCGCGTT	20	7.03379E-4	45.0	25
CGCATCG	20	7.03379E-4	45.0	21
TTCGTAA	20	7.03379E-4	45.0	32
ACTTACG	40	6.8175723E-9	45.0	1
ATCCGTT	25	3.891222E-5	45.0	16
ATATCCG	20	7.03379E-4	45.0	2
CGTAGTG	25	3.891222E-5	45.0	45
ACAATCG	45	3.8562575E-10	45.0	23
CGAATAC	20	7.03379E-4	45.0	27
CGTACTA	25	3.891222E-5	45.0	26
AGCGAAT	20	7.03379E-4	45.0	25