##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545558_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2617604 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.36998300736093 31.0 31.0 33.0 30.0 34.0 2 31.709446883485814 31.0 31.0 34.0 30.0 34.0 3 31.80996781789759 31.0 31.0 34.0 30.0 34.0 4 35.504931227183334 37.0 35.0 37.0 33.0 37.0 5 35.367387121963446 37.0 35.0 37.0 33.0 37.0 6 35.44162065767014 37.0 35.0 37.0 33.0 37.0 7 35.91950501298134 37.0 35.0 37.0 35.0 37.0 8 35.95648539656877 37.0 35.0 37.0 35.0 37.0 9 37.68312968653777 39.0 37.0 39.0 35.0 39.0 10 37.0103934743376 39.0 37.0 39.0 32.0 39.0 11 36.532375408961784 39.0 35.0 39.0 32.0 39.0 12 35.7775671950379 37.0 35.0 39.0 31.0 39.0 13 35.43163595410154 37.0 35.0 39.0 30.0 39.0 14 36.43217843493515 38.0 35.0 41.0 31.0 41.0 15 36.69292184761331 38.0 35.0 41.0 31.0 41.0 16 36.87077380688599 38.0 35.0 41.0 32.0 41.0 17 36.811501663353205 38.0 35.0 41.0 32.0 41.0 18 36.738061983401614 38.0 35.0 40.0 31.0 41.0 19 36.69763073406062 38.0 35.0 40.0 31.0 41.0 20 36.55612575469781 38.0 35.0 40.0 31.0 41.0 21 36.370484229088895 38.0 35.0 40.0 31.0 41.0 22 36.292666499592755 38.0 35.0 40.0 31.0 41.0 23 36.25253514282527 38.0 35.0 40.0 31.0 41.0 24 36.192598269256926 37.0 35.0 40.0 31.0 41.0 25 36.1047939260484 37.0 35.0 40.0 30.0 41.0 26 36.02590002154642 37.0 35.0 40.0 30.0 41.0 27 35.96801540645568 37.0 34.0 40.0 30.0 41.0 28 35.97845625235903 37.0 35.0 40.0 30.0 41.0 29 35.99300314333261 37.0 35.0 40.0 30.0 41.0 30 35.91967539780654 37.0 35.0 40.0 30.0 41.0 31 35.735431715416084 37.0 34.0 40.0 30.0 41.0 32 35.55152383630221 37.0 34.0 40.0 29.0 41.0 33 35.37988519271823 37.0 34.0 40.0 29.0 41.0 34 35.235840868213835 37.0 34.0 40.0 28.0 41.0 35 35.09516641936672 37.0 34.0 40.0 27.0 41.0 36 34.93045242901524 37.0 34.0 40.0 26.0 41.0 37 34.87544907480276 37.0 34.0 40.0 26.0 41.0 38 34.857324866557356 36.0 34.0 40.0 27.0 41.0 39 34.82365552619877 36.0 34.0 40.0 26.0 41.0 40 34.66421124050849 36.0 34.0 40.0 25.0 41.0 41 34.64869208635072 36.0 34.0 40.0 25.0 41.0 42 34.573739572525106 36.0 33.0 40.0 25.0 41.0 43 34.47064338226867 36.0 33.0 40.0 25.0 41.0 44 34.41835205019552 36.0 33.0 40.0 24.0 41.0 45 34.37966323401095 35.0 33.0 40.0 24.0 41.0 46 34.36333035860275 35.0 33.0 40.0 24.0 41.0 47 34.30833884728171 35.0 33.0 40.0 24.0 41.0 48 34.29318147435594 35.0 33.0 40.0 24.0 41.0 49 34.23421418977049 36.0 33.0 40.0 24.0 41.0 50 34.11399929095463 35.0 33.0 40.0 24.0 41.0 51 33.96081263628876 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 1.0 12 1.0 13 7.0 14 12.0 15 67.0 16 245.0 17 585.0 18 1281.0 19 2621.0 20 4557.0 21 7114.0 22 11026.0 23 15889.0 24 22465.0 25 30933.0 26 40625.0 27 48079.0 28 53466.0 29 61178.0 30 72628.0 31 88603.0 32 110422.0 33 143504.0 34 241148.0 35 382915.0 36 179851.0 37 220636.0 38 320868.0 39 556614.0 40 260.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.03180924234529 24.22486365393696 26.123775788851177 15.619551314866573 2 29.224053752974093 27.33052822352044 30.008702615063243 13.436715408442224 3 27.81398561432516 26.535564585017447 32.26229024711148 13.388159553545915 4 24.90193321831721 29.001254582434928 31.4685491006279 14.628263098619959 5 22.89425749655028 33.50678712288032 30.18290772783049 13.416047652738916 6 20.616105415486835 42.37352173972839 26.567081957393096 10.443290887391676 7 88.92334363792231 3.6273630388706617 6.132287389536385 1.3170059336706392 8 90.51338552355513 2.5839278974206947 5.679697922222002 1.2229886568021748 9 86.60549876910335 4.428400934595149 6.84656655475771 2.1195337415437936 10 51.48857504802101 27.78533345762002 11.824974289464716 8.901117204894247 11 40.28382444403355 20.708365360077384 24.863386516829895 14.14442367905917 12 38.07264200390892 20.624204425115487 26.938146488162456 14.365007082813138 13 21.01601311733937 37.60152414192521 26.6072331796559 14.775229561079522 14 15.230569635437599 40.635405508243416 29.072082713810033 15.061942142508952 15 14.72594785154668 24.444950420308036 46.14414556212475 14.68495616602053 16 16.880819253026814 20.245270101971116 44.32377853945822 18.55013210554385 17 17.059608710866883 19.465625816586467 30.39359658680228 33.08116888574437 18 20.910573180664453 22.723987279970537 35.68316674332711 20.682272796037903 19 26.95071523423711 24.150941089637698 27.91140294712264 20.986940729002555 20 30.095652359944435 23.479258130718016 27.355245484038075 19.069844025299474 21 22.340086582997277 27.70781982301372 30.15742640980072 19.794667184188288 22 22.708324100971726 22.745533701812803 28.183292812816607 26.362849384398864 23 19.01555773906213 29.14665472699461 26.923973221312313 24.91381431263094 24 19.48354296524608 23.99132947535227 39.76888788372878 16.75623967567287 25 17.39174451139286 25.731967096627294 36.08555763209409 20.790730759885758 26 17.48549436813208 33.201698958283984 28.972029382595686 20.340777290988246 27 17.817515560031236 33.87594150986933 29.927597910149895 18.37894501994954 28 15.304033765229578 28.81799538814886 37.28123123283736 18.59673961378421 29 16.180751557531238 23.649299130044117 38.040207762518705 22.129741549905944 30 18.7756436802511 29.831288460745014 32.36207615819658 19.030991700807302 31 27.718134599427568 27.643256963238137 26.176075525556957 18.462532911777334 32 28.127325600052565 26.000456906392255 28.179090496499853 17.693126997055323 33 27.05550572202671 27.735516907828682 26.033349582289755 19.17562778785485 34 19.533397717913022 28.150705759923962 28.711906002588627 23.60399051957439 35 19.55299579309934 26.19055441541196 32.547436510641035 21.709013280847675 36 28.938525460688474 25.094704928629387 28.045915272134366 17.92085433854777 37 20.875006303474475 31.475769444117596 29.888363556901652 17.760860695506274 38 20.94862324476888 31.7015484389541 25.459122159043158 21.890706157233865 39 20.586994824274413 31.346643724566437 28.17683652683905 19.889524924320103 40 24.032856001136917 26.773874123052995 26.68566368327677 22.507606192533324 41 17.705581134503156 25.476619076071096 29.38202264360843 27.43577714581732 42 22.674629164686486 24.686774622899417 26.172904686881594 26.46569152553251 43 22.174668131619605 26.16759448717224 27.254237080933557 24.4035003002746 44 18.998557459417086 29.969162638810147 30.010956584724045 21.021323317048722 45 17.990039746271783 36.48550353682222 24.68925780981386 20.835198907092135 46 21.795772011350838 32.35982218853577 27.330337209142407 18.514068590970982 47 21.308838158865896 29.320439608130183 27.060472095855598 22.310250137148323 48 22.72555359787042 25.34458993797381 31.054391726174014 20.87546473798176 49 21.486405124686545 24.479218399727383 32.254038425980404 21.780338049605668 50 19.052958354281245 33.34622043670471 28.16174639097434 19.439074818039703 51 18.81220383220686 33.29124649870645 25.69590358205443 22.200646087032265 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2438.0 1 3705.5 2 4973.0 3 12464.5 4 19956.0 5 14837.0 6 9718.0 7 9900.5 8 10083.0 9 10664.0 10 11245.0 11 11460.0 12 11675.0 13 11611.0 14 11547.0 15 11253.0 16 10959.0 17 10380.5 18 9802.0 19 10416.0 20 11030.0 21 11761.5 22 12493.0 23 13059.0 24 13625.0 25 15827.5 26 23282.0 27 28534.0 28 31010.0 29 33486.0 30 43997.0 31 54508.0 32 57017.5 33 59527.0 34 74583.5 35 89640.0 36 90264.0 37 90888.0 38 107289.5 39 123691.0 40 162126.5 41 200562.0 42 225404.5 43 250247.0 44 253179.5 45 256112.0 46 243855.5 47 231599.0 48 216086.5 49 200574.0 50 190502.0 51 180430.0 52 169359.5 53 158289.0 54 139694.5 55 121100.0 56 109416.5 57 97733.0 58 88469.5 59 79206.0 60 72381.5 61 65557.0 62 55584.0 63 45611.0 64 40062.5 65 34514.0 66 26503.5 67 18493.0 68 16722.5 69 14952.0 70 12177.5 71 9403.0 72 8270.0 73 7137.0 74 5267.0 75 2924.5 76 2452.0 77 1695.5 78 939.0 79 991.5 80 1044.0 81 665.0 82 286.0 83 169.0 84 52.0 85 41.5 86 31.0 87 23.0 88 15.0 89 8.0 90 1.0 91 5.0 92 9.0 93 7.5 94 6.0 95 4.0 96 2.0 97 2.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2617604.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.436510910952846 #Duplication Level Percentage of deduplicated Percentage of total 1 80.57465075098483 11.632168247128075 2 7.655785408277459 2.2104565915702223 3 2.614744556152634 1.1324336494275618 4 1.3344844647676477 0.7706119814446086 5 0.8060920221302951 0.5818578136358025 6 0.5189045243792696 0.44947024967664734 7 0.36024291526243946 0.36404555437457686 8 0.27488819407483644 0.31747411304427997 9 0.21483917652291018 0.2791375304375806 >10 2.4392994561943415 8.553078917885017 >50 1.1505988379453909 12.123329404811575 >100 2.033107375702564 58.70441331018939 >500 0.02049879113821298 1.9130979752648973 >1k 0.0013310903336501937 0.27348638338191594 >5k 2.662180667300387E-4 0.26614575673408764 >10k+ 2.662180667300387E-4 0.42879252099382176 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11157 0.42622948314565534 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6925 0.2645549135774548 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.820287560685268E-5 0.0 0.0 0.02166103046908547 0.0 2 3.820287560685268E-5 0.0 0.0 0.07166859463845562 0.0 3 3.820287560685268E-5 0.0 0.0 0.10112301173133904 0.0 4 3.820287560685268E-5 0.0 0.0 0.1667937548995188 0.0 5 3.820287560685268E-5 0.0 0.0 0.27444945835962964 0.0 6 3.820287560685268E-5 0.0 0.0 0.3763747304787126 0.0 7 3.820287560685268E-5 0.0 0.0 0.4381487803349934 0.0 8 3.820287560685268E-5 0.0 0.0 0.5748386692563122 0.0 9 3.820287560685268E-5 0.0 0.0 0.6282080864790854 0.0 10 3.820287560685268E-5 0.0 0.0 0.7433897564337463 0.0 11 3.820287560685268E-5 0.0 0.0 0.8745020255164647 0.0 12 3.820287560685268E-5 0.0 0.0 1.003322122062772 0.0 13 3.820287560685268E-5 0.0 0.0 1.0475992548911142 0.0 14 3.820287560685268E-5 0.0 0.0 1.064714143162984 0.0 15 3.820287560685268E-5 0.0 0.0 1.094818009141184 0.0 16 3.820287560685268E-5 0.0 0.0 1.1559044072365414 0.0 17 3.820287560685268E-5 0.0 0.0 1.234373113733017 0.0 18 3.820287560685268E-5 0.0 0.0 1.3474918284049078 0.0 19 3.820287560685268E-5 0.0 0.0 1.4150345124778232 0.0 20 3.820287560685268E-5 0.0 0.0 1.4734085064050941 0.0 21 3.820287560685268E-5 0.0 0.0 1.5497760547431927 0.0 22 3.820287560685268E-5 0.0 0.0 1.6348538587196535 0.0 23 3.820287560685268E-5 0.0 0.0 1.7344487554267185 0.0 24 3.820287560685268E-5 0.0 0.0 1.8103578692575348 0.0 25 3.820287560685268E-5 0.0 0.0 1.8711768472236443 0.0 26 3.820287560685268E-5 0.0 0.0 1.9304677101654795 0.0 27 3.820287560685268E-5 0.0 0.0 1.9932350347875385 0.0 28 3.820287560685268E-5 0.0 0.0 2.0594024153386075 0.0 29 3.820287560685268E-5 0.0 0.0 2.135464340671851 0.0 30 3.820287560685268E-5 0.0 0.0 2.231200746942624 0.0 31 3.820287560685268E-5 0.0 0.0 2.319831418350522 0.0 32 3.820287560685268E-5 0.0 0.0 2.3952820976740563 0.0 33 3.820287560685268E-5 0.0 0.0 2.4727957322803604 0.0 34 7.640575121370536E-5 0.0 0.0 2.5557341752228373 0.0 35 1.1460862682055803E-4 0.0 0.0 2.6632752700561277 0.0 36 1.1460862682055803E-4 0.0 0.0 2.7576363728050537 0.0 37 1.1460862682055803E-4 0.0 0.0 2.8497053030175685 0.0 38 1.1460862682055803E-4 0.0 0.0 2.9442192172689223 0.0 39 1.1460862682055803E-4 0.0 0.0 3.0456096491295095 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGCA 40 6.8212103E-9 45.000004 23 CGACATA 20 7.0349395E-4 45.000004 43 ATCGTAC 40 6.8212103E-9 45.000004 28 AACGCAT 35 1.2127202E-7 45.000004 38 TCGTAAT 35 1.2127202E-7 45.000004 17 ACGCGGT 75 0.0 45.000004 23 TACGCGC 110 0.0 45.0 34 ACGTAAG 100 0.0 45.0 1 TTCGATC 25 3.8921768E-5 45.0 17 TCGAACA 25 3.8921768E-5 45.0 25 TATATCG 30 2.1665692E-6 44.999996 27 CGTCGGA 30 2.1665692E-6 44.999996 19 CGACGGT 250 0.0 44.100002 28 CGGTCTA 250 0.0 43.2 31 TACGGGA 820 0.0 42.80488 4 TCTAGCG 80 0.0 42.187504 1 CGTTATC 135 0.0 41.666664 34 CGTTTTT 8005 0.0 41.37414 1 AACCGAG 60 3.6379788E-12 41.249996 1 TACGCCT 55 6.184564E-11 40.909092 35 >>END_MODULE