##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545556_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1727682 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.329751655686636 31.0 31.0 33.0 30.0 34.0 2 31.681748724591678 31.0 31.0 34.0 30.0 34.0 3 31.783844480639377 31.0 31.0 34.0 30.0 34.0 4 35.4756349837528 37.0 35.0 37.0 33.0 37.0 5 35.324828874758204 37.0 35.0 37.0 33.0 37.0 6 35.396073467223715 37.0 35.0 37.0 33.0 37.0 7 35.853249035412766 37.0 35.0 37.0 35.0 37.0 8 35.88836950318404 37.0 35.0 37.0 35.0 37.0 9 37.59367580376481 39.0 37.0 39.0 35.0 39.0 10 36.91933237713885 39.0 37.0 39.0 32.0 39.0 11 36.52085221701679 39.0 35.0 39.0 32.0 39.0 12 35.486320399240135 37.0 35.0 39.0 31.0 39.0 13 35.0248338525261 37.0 34.0 39.0 30.0 39.0 14 35.98026778076058 38.0 35.0 40.0 30.0 41.0 15 36.29643186651247 38.0 35.0 40.0 31.0 41.0 16 36.51478512828171 38.0 35.0 40.0 32.0 41.0 17 36.48264495433766 38.0 35.0 40.0 32.0 41.0 18 36.43952764455496 37.0 35.0 40.0 31.0 41.0 19 36.36753349285343 37.0 35.0 40.0 31.0 41.0 20 36.20663351241721 37.0 35.0 40.0 31.0 41.0 21 35.99411523648449 36.0 34.0 40.0 31.0 41.0 22 35.92550828219545 36.0 34.0 40.0 30.0 41.0 23 35.90958000372754 36.0 34.0 40.0 30.0 41.0 24 35.85855325227675 36.0 34.0 40.0 30.0 41.0 25 35.762474228474915 36.0 34.0 40.0 30.0 41.0 26 35.65553498849904 36.0 34.0 40.0 30.0 41.0 27 35.60215826755155 36.0 34.0 40.0 30.0 41.0 28 35.6310466856748 36.0 34.0 40.0 30.0 41.0 29 35.6528649369502 36.0 34.0 40.0 30.0 41.0 30 35.597904012428216 36.0 34.0 40.0 30.0 41.0 31 35.41611245588019 36.0 34.0 40.0 29.0 41.0 32 35.23841713926521 36.0 34.0 40.0 29.0 41.0 33 35.06311636053394 36.0 34.0 40.0 28.0 41.0 34 34.888790877024825 35.0 34.0 40.0 27.0 41.0 35 34.78595713794552 35.0 34.0 40.0 27.0 41.0 36 34.57649497997895 35.0 33.0 40.0 25.0 41.0 37 34.51708705653008 35.0 33.0 40.0 25.0 41.0 38 34.54068225518353 35.0 33.0 40.0 26.0 41.0 39 34.499774264013865 35.0 33.0 40.0 25.0 41.0 40 34.34628421202513 35.0 33.0 40.0 24.0 41.0 41 34.33797018201266 35.0 33.0 40.0 24.0 41.0 42 34.261506457785636 35.0 33.0 40.0 24.0 41.0 43 34.187623648333435 35.0 33.0 40.0 24.0 41.0 44 34.14607202019816 35.0 33.0 40.0 24.0 41.0 45 34.10684605153032 35.0 33.0 40.0 24.0 41.0 46 34.074138643569825 35.0 33.0 40.0 24.0 41.0 47 34.038124492817545 35.0 33.0 40.0 24.0 41.0 48 34.04606692666822 35.0 33.0 39.0 24.0 41.0 49 33.993666079753105 35.0 33.0 39.0 24.0 41.0 50 33.8670415041657 35.0 33.0 39.0 24.0 41.0 51 33.692986903839945 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 3.0 13 5.0 14 14.0 15 45.0 16 185.0 17 411.0 18 1000.0 19 1976.0 20 3377.0 21 5167.0 22 7879.0 23 11129.0 24 15587.0 25 21620.0 26 28437.0 27 33880.0 28 37460.0 29 42854.0 30 50818.0 31 62240.0 32 77400.0 33 100808.0 34 177648.0 35 287243.0 36 111573.0 37 133668.0 38 187734.0 39 327256.0 40 263.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.80100157320618 23.404538566703824 29.560358908641753 14.234100951448243 2 30.979370046108023 25.747967507909443 29.64613858337356 13.626523862608975 3 29.15305015622088 24.414215115976205 31.424532986973297 15.008201740829621 4 26.462740249652423 26.917858726316535 31.20076495558789 15.418636068443151 5 23.266608091072317 32.94443074593588 29.676699763035096 14.112261399956704 6 20.877279499352312 41.570786753580805 26.649811713035156 10.902122034031727 7 87.33285407847046 4.772695438165125 6.389891195254682 1.5045592881097332 8 89.25519858399868 3.1225653795084978 5.875386789930091 1.7468492465627354 9 85.23125204754116 4.925732860561145 7.3361880253426275 2.506827066555072 10 53.62207860011276 21.684546114389107 14.23381154633781 10.45956373916033 11 47.97966292407978 19.890813239936517 18.541664496128337 13.587859339855369 12 44.14597130721973 20.439120162159472 22.6155044736242 12.7994040569966 13 20.61803040142804 43.353406471792844 21.932624175050734 14.095938951728385 14 14.609690903765854 43.53897302860133 25.893538278456337 15.957797789176482 15 13.614484610015037 23.06037800937904 48.497235023574945 14.82790235703098 16 14.017162880669012 17.97882943736174 48.52426546088922 19.479742221080038 17 14.912466530298978 18.747026362490317 28.873542700566425 37.46696440664428 18 20.1908105774095 23.15397162209249 36.57050313657258 20.08471466392542 19 29.13406518097659 25.27884182390046 24.96454787397218 20.622545121150768 20 32.23926625385921 21.664056232570577 26.181091196180777 19.915586317389426 21 20.707109294418764 29.34388388603921 27.814204234344054 22.13480258519797 22 22.32337895515494 24.271422634489447 24.485640297230624 28.91955811312498 23 18.48638812003598 32.16593099887595 24.5299192791266 24.81776160196147 24 18.2107586928613 23.41356800614928 41.956042836586825 16.419630464402594 25 15.996983241128865 26.27838919430775 37.18027970425113 20.544347860312257 26 15.870397445826256 35.49634712869614 27.138153896376764 21.49510152910084 27 16.658389680508336 36.89023790257698 27.353992227736356 19.09738018917833 28 13.950020895048972 29.500104764649976 38.88047684701236 17.669397493288695 29 14.994541819617268 24.442171649643857 37.71371120379792 22.849575326940954 30 16.98067121148452 33.822891018138755 30.29145409861306 18.90498367176367 31 28.26642865990385 28.525793519872288 24.06739203163545 19.14038578858841 32 30.15242388356191 25.639093305365222 26.45666274233337 17.7518200687395 33 28.430116190363737 28.16033274641977 23.895195990928887 19.51435507228761 34 18.30128461140418 27.972277305661574 28.22301789333917 25.503420189595076 35 19.916743937831153 24.795419527436184 32.33708518118497 22.9507513535477 36 31.0413027397403 26.132876304782943 24.753803072556178 18.072017882920584 37 19.249780920331403 34.93466969037126 28.7516452680528 17.063904121244537 38 19.884677851595374 33.958911420041424 24.95945434402859 21.196956384334616 39 20.44948086511291 32.95438628173471 27.21067881705082 19.385454036101553 40 25.310213337871208 26.159270050854268 25.483566999019498 23.046949612255034 41 16.03095940109349 25.364389974543926 28.630905455980905 29.973745168381683 42 20.808458964091773 25.16435316221388 23.817577540311238 30.209610333383115 43 20.411626676668508 26.362143033266538 26.657394126928452 26.568836163136506 44 18.321600850156454 30.885255504195797 28.937269705883374 21.85587393976438 45 16.889566482720777 40.24484829962922 21.25217487940489 21.613410338245117 46 20.17205712625356 35.62189106560119 25.430258577678067 18.77579323046718 47 20.59105784513585 28.355391790850398 26.970414694370838 24.083135669642907 48 21.807311762234022 24.64533403716656 32.21067302894862 21.336681171650802 49 20.387721814546893 25.19063114624103 33.029400086358486 21.39224695285359 50 19.23779954875955 35.37196081223281 26.261372173814397 19.12886746519325 51 18.293239149334195 34.174576108334755 24.096679828811087 23.435504913519964 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1254.0 1 1948.0 2 2642.0 3 7009.0 4 11376.0 5 8600.5 6 5825.0 7 6129.0 8 6433.0 9 6833.0 10 7233.0 11 7636.0 12 8039.0 13 7749.5 14 7460.0 15 7165.0 16 6870.0 17 7096.0 18 7322.0 19 6491.0 20 5660.0 21 6055.5 22 6451.0 23 7462.0 24 8473.0 25 8230.5 26 10119.5 27 12251.0 28 17781.5 29 23312.0 30 26148.5 31 28985.0 32 34287.5 33 39590.0 34 47349.0 35 55108.0 36 57210.5 37 59313.0 38 68978.5 39 78644.0 40 97060.0 41 115476.0 42 145550.0 43 175624.0 44 181014.5 45 186405.0 46 179622.5 47 172840.0 48 160854.0 49 148868.0 50 131248.0 51 113628.0 52 102899.0 53 92170.0 54 82006.0 55 71842.0 56 66086.0 57 60330.0 58 56042.5 59 51755.0 60 46927.0 61 42099.0 62 38311.5 63 34524.0 64 29402.0 65 24280.0 66 20986.5 67 17693.0 68 14303.5 69 10914.0 70 9266.5 71 7619.0 72 6486.5 73 5354.0 74 4027.5 75 2252.5 76 1804.0 77 1515.5 78 1227.0 79 720.0 80 213.0 81 128.5 82 44.0 83 33.5 84 23.0 85 19.0 86 15.0 87 8.0 88 1.0 89 0.5 90 0.0 91 1.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1727682.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.852118779514385 #Duplication Level Percentage of deduplicated Percentage of total 1 80.61973180839401 11.973738327908617 2 7.538004370110551 2.2391067253076087 3 2.6233554456466432 1.168871600388895 4 1.3389338213681434 0.7954401661147504 5 0.78491479808736 0.582882390649601 6 0.5040279586691663 0.4491529866210374 7 0.338337971979935 0.35175250232262034 8 0.24264618949584493 0.28830480222310756 9 0.20153783906102116 0.2693937531870846 >10 2.5724444539745583 9.48358144517652 >50 1.2322635437047447 13.26816741656714 >100 1.9826100060937542 56.12445306216964 >500 0.01805226846403656 1.6658649304561137 >1k 0.002354643712700421 0.574464320862652 >5k 7.84881237566807E-4 0.7648255700446144 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6738 0.39000232681708785 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6384 0.36951244499855873 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2322 0.13439973328425023 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02130021612773647 0.0 2 0.0 0.0 0.0 0.07489804257959509 0.0 3 0.0 0.0 0.0 0.11217342080313392 0.0 4 0.0 0.0 0.0 0.19465387727602648 0.0 5 0.0 0.0 0.0 0.3299797069136566 0.0 6 0.0 0.0 0.0 0.4659422277942353 0.0 7 0.0 0.0 0.0 0.5481911601787829 0.0 8 0.0 0.0 0.0 0.7407613206597048 0.0 9 0.0 0.0 0.0 0.8094082128539859 0.0 10 5.7881022086240406E-5 0.0 0.0 0.9281221891528649 0.0 11 5.7881022086240406E-5 0.0 0.0 1.0690624779328604 0.0 12 5.7881022086240406E-5 0.0 0.0 1.1898601710268442 0.0 13 5.7881022086240406E-5 0.0 0.0 1.2362228697179227 0.0 14 5.7881022086240406E-5 0.0 0.0 1.251734983637035 0.0 15 5.7881022086240406E-5 0.0 0.0 1.2748873924715312 0.0 16 5.7881022086240406E-5 0.0 0.0 1.3394247320976893 0.0 17 1.1576204417248081E-4 0.0 0.0 1.4147858228539743 0.0 18 1.1576204417248081E-4 0.0 0.0 1.5251649319724347 0.0 19 1.1576204417248081E-4 0.0 0.0 1.5739007525690492 0.0 20 1.1576204417248081E-4 0.0 0.0 1.624662408938682 0.0 21 1.1576204417248081E-4 0.0 0.0 1.7017599303575541 0.0 22 1.1576204417248081E-4 0.0 0.0 1.7774683072463566 0.0 23 1.736430662587212E-4 0.0 0.0 1.8686887980542715 0.0 24 1.736430662587212E-4 0.0 0.0 1.9364095938951729 0.0 25 1.736430662587212E-4 0.0 0.0 1.9911650407887562 0.0 26 1.736430662587212E-4 0.0 0.0 2.047425394256582 0.0 27 1.736430662587212E-4 0.0 0.0 2.0984185747145596 0.0 28 2.3152408834496162E-4 0.0 0.0 2.1564732398670587 0.0 29 2.3152408834496162E-4 0.0 0.0 2.2202581262060956 0.0 30 2.3152408834496162E-4 0.0 0.0 2.304532894363662 0.0 31 2.3152408834496162E-4 0.0 0.0 2.385971492439002 0.0 32 2.3152408834496162E-4 0.0 0.0 2.4626059656811843 0.0 33 2.3152408834496162E-4 0.0 0.0 2.532121073206759 0.0 34 2.3152408834496162E-4 0.0 0.0 2.611070787332391 0.0 35 2.3152408834496162E-4 0.0 0.0 2.7226075168925763 0.0 36 2.8940511043120206E-4 0.0 0.0 2.8093132879777643 0.0 37 2.8940511043120206E-4 0.0 0.0 2.896887274394246 0.0 38 2.8940511043120206E-4 0.0 0.0 2.983766688545693 0.0 39 2.8940511043120206E-4 0.0 0.0 3.072151009271382 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATCG 35 1.212411E-7 45.000004 12 GCGATTC 65 0.0 45.000004 9 TGCGTCG 35 1.212411E-7 45.000004 1 ATCTACG 20 7.034275E-4 45.0 33 GTTTCGA 40 6.8193913E-9 45.0 23 CGTTGCC 20 7.034275E-4 45.0 21 TAGCGCA 20 7.034275E-4 45.0 29 ATAGCCG 20 7.034275E-4 45.0 20 CGTCTAG 20 7.034275E-4 45.0 32 CCGTCTA 25 3.8916245E-5 45.0 31 ATCCGTC 20 7.034275E-4 45.0 15 TATTCGA 25 3.8916245E-5 45.0 13 ACCCGTG 20 7.034275E-4 45.0 31 ACCCGTA 25 3.8916245E-5 45.0 19 CGTCCGA 50 2.1827873E-11 45.0 20 TCGGTAA 20 7.034275E-4 45.0 10 TAGTCGA 20 7.034275E-4 45.0 44 TGCGTAT 20 7.034275E-4 45.0 29 TACCGGC 20 7.034275E-4 45.0 30 TACCCGT 30 2.16614E-6 44.999996 18 >>END_MODULE