SRR1545554_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545554_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1530212
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6088	0.3978533693370592	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5072	0.3314573405515053	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACGA	20	7.034019E-4	45.000004	8
TACCCGC	20	7.034019E-4	45.000004	24
ACCGGGT	20	7.034019E-4	45.000004	4
CGTATGA	20	7.034019E-4	45.000004	15
CTCCGAT	20	7.034019E-4	45.000004	30
CGACGAA	45	3.8562575E-10	45.000004	29
ACGTTAG	45	3.8562575E-10	45.000004	1
TTAGCGA	20	7.034019E-4	45.000004	26
GCGAAGT	20	7.034019E-4	45.000004	43
GTTTACG	30	2.1659744E-6	45.000004	1
TAAACGC	35	1.2122837E-7	45.000004	30
TAAGTCG	30	2.1659744E-6	45.000004	1
TAGCCGT	45	3.8562575E-10	45.000004	44
GTAATCG	35	1.2122837E-7	45.000004	38
AATGCGT	20	7.034019E-4	45.000004	24
ATATCGA	20	7.034019E-4	45.000004	25
TCAATCG	20	7.034019E-4	45.000004	37
CGCTACG	20	7.034019E-4	45.000004	42
GTCGTAA	40	6.8175723E-9	45.000004	35
GTGTACC	30	2.1659744E-6	45.000004	24