##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545552_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1302235 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3974597518881 31.0 31.0 33.0 30.0 34.0 2 31.745389273057473 31.0 31.0 34.0 30.0 34.0 3 31.834913053327547 31.0 31.0 34.0 30.0 34.0 4 35.5133973514765 37.0 35.0 37.0 33.0 37.0 5 35.38072083763683 37.0 35.0 37.0 33.0 37.0 6 35.46647878455118 37.0 35.0 37.0 33.0 37.0 7 35.90324327022388 37.0 35.0 37.0 35.0 37.0 8 35.94678917399701 37.0 35.0 37.0 35.0 37.0 9 37.69987060707169 39.0 37.0 39.0 35.0 39.0 10 37.06887620130007 39.0 37.0 39.0 33.0 39.0 11 36.6407153854719 39.0 35.0 39.0 32.0 39.0 12 35.43196197306938 37.0 35.0 39.0 31.0 39.0 13 34.86605029046217 37.0 34.0 39.0 29.0 39.0 14 35.78370877760158 37.0 35.0 40.0 30.0 41.0 15 36.146801460565875 37.0 35.0 40.0 31.0 41.0 16 36.40587989111028 37.0 35.0 40.0 32.0 41.0 17 36.3527919307959 37.0 35.0 40.0 32.0 41.0 18 36.32785557138305 36.0 35.0 40.0 31.0 41.0 19 36.27115535982369 36.0 35.0 40.0 31.0 41.0 20 36.08018905957834 36.0 35.0 40.0 31.0 41.0 21 35.86812748851014 36.0 34.0 40.0 31.0 41.0 22 35.78189881242633 35.0 34.0 40.0 30.0 41.0 23 35.80134921884299 35.0 34.0 40.0 31.0 41.0 24 35.743262160823505 35.0 34.0 40.0 31.0 41.0 25 35.670693845580864 35.0 34.0 40.0 30.0 41.0 26 35.53753278018176 35.0 34.0 40.0 30.0 41.0 27 35.47480447077525 35.0 34.0 40.0 30.0 41.0 28 35.515808590615364 36.0 34.0 40.0 30.0 41.0 29 35.55028009537449 36.0 34.0 40.0 30.0 41.0 30 35.49751005002937 36.0 34.0 40.0 30.0 41.0 31 35.28740281132054 35.0 34.0 40.0 30.0 41.0 32 35.085187389372884 35.0 34.0 40.0 29.0 41.0 33 34.93124436065687 35.0 34.0 40.0 29.0 41.0 34 34.78519161288093 35.0 34.0 40.0 27.0 41.0 35 34.646847151243826 35.0 34.0 40.0 27.0 41.0 36 34.40187523757233 35.0 33.0 40.0 25.0 41.0 37 34.33279246833329 35.0 33.0 40.0 25.0 41.0 38 34.38904498803979 35.0 33.0 40.0 27.0 41.0 39 34.35119467684404 35.0 33.0 40.0 26.0 41.0 40 34.157087622433735 35.0 33.0 40.0 24.0 41.0 41 34.18799679013389 35.0 33.0 40.0 24.0 41.0 42 34.10748904767573 35.0 33.0 40.0 25.0 41.0 43 34.02798726804302 35.0 33.0 39.0 24.0 41.0 44 33.96461544959243 35.0 33.0 39.0 24.0 41.0 45 33.89772967244775 35.0 33.0 39.0 24.0 41.0 46 33.88773301285866 35.0 33.0 39.0 24.0 41.0 47 33.84570066078703 35.0 33.0 39.0 24.0 41.0 48 33.90613752510107 35.0 33.0 39.0 24.0 41.0 49 33.879244529597194 35.0 33.0 39.0 24.0 41.0 50 33.72080692040991 35.0 33.0 39.0 24.0 41.0 51 33.53146628680691 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 12.0 15 34.0 16 112.0 17 269.0 18 681.0 19 1267.0 20 2352.0 21 3740.0 22 5768.0 23 8418.0 24 11786.0 25 16504.0 26 21477.0 27 25195.0 28 27961.0 29 32156.0 30 38306.0 31 47270.0 32 59117.0 33 78207.0 34 143328.0 35 242166.0 36 79718.0 37 94898.0 38 132031.0 39 229329.0 40 131.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.666196961377935 22.798266057969567 29.16839126578536 14.367145714867133 2 30.68854699804567 25.7649349003828 29.708769922479426 13.837748179092099 3 28.52611087860486 25.163046608331065 31.500305244445126 14.810537268618951 4 25.374529174841715 28.19299128037566 31.449853521061865 14.982626023720758 5 22.314328826978233 32.652478239334684 30.51000779429212 14.523185139394965 6 20.800316379148157 42.580409833862554 26.505354256336222 10.11391953065307 7 88.3028792806214 4.052340783345556 5.873363870576355 1.7714160654566955 8 89.89514181388152 3.135378791078415 5.527573748209808 1.4419056468302571 9 86.98691096461084 4.024849585520278 6.803687506479246 2.184551943389634 10 56.9117709169236 20.96564752137671 12.321201626434553 9.80137993526514 11 51.37551977945609 17.62938332942979 18.035915176600227 12.959181714513893 12 47.43322057846702 19.018226356993935 21.680956202221566 11.867596862317477 13 19.92904506483085 47.92345467599934 19.68638532983678 12.46111492933303 14 13.236320633372625 48.06137141145799 24.674194749795543 14.028113205373838 15 12.222371538163234 21.28102838581362 53.710428609275596 12.786171466747554 16 13.194008761859418 15.016106923865507 52.22137325444333 19.56851105983175 17 13.092030240317607 16.019228480266616 28.9218919780224 41.966849301393374 18 19.77607728251813 21.30844279258352 37.41121994110126 21.504259983797088 19 29.25217030720262 23.7096990942495 25.540167481291782 21.497963117256102 20 33.51015753685011 19.898251851624323 26.03331963892846 20.55827097259711 21 20.120178001666368 27.784002119433126 28.847327863250488 23.248492015650015 22 21.922694444551098 23.808298809354685 23.80630224191486 30.462704504179356 23 17.608265789200875 30.833144555322196 23.629145277158116 27.929444378318813 24 18.142424370409334 21.22735143810449 44.2562210353738 16.374003156112376 25 15.278732333257821 23.993288461759974 39.1262713719106 21.601707833071604 26 15.976609444531901 35.76627874385191 26.40544909328961 21.85166271832657 27 15.614078872092978 37.007222198758285 27.26205331602975 20.116645613118983 28 12.558332405441414 29.518942433585337 39.83466885777145 18.088056303201803 29 13.170433907858412 23.108501921696163 39.44495425172876 24.276109918716667 30 16.316409864578972 33.172123311076724 32.32573229870185 18.185734525642452 31 29.541442212811052 28.206122550845276 24.127365644449736 18.125069591893936 32 30.69707080519261 25.65066980998053 26.988984323106045 16.66327506172081 33 29.78164463403303 28.103683282971197 23.211325144847127 18.903346938148644 34 18.10648615649249 27.486974317231528 27.434449235353064 26.972090290922914 35 19.056007556239848 24.746378341850743 32.178139890265584 24.019474211643825 36 32.48845254504755 24.428693745752494 25.588545846179837 17.494307863020115 37 19.437889474633995 34.72936912308454 29.048213264118992 16.784528138162464 38 18.910181342077276 34.22769315830092 24.28248357631303 22.579641923308774 39 19.3490422235618 34.394329748470895 27.33876758035224 18.917860447615062 40 24.59786444074994 24.916624111623477 26.21446973856485 24.271041709061727 41 16.033358034456146 22.96497943919492 28.48149527543032 32.52016725091861 42 20.639976655519167 24.612838696548625 24.757820209102043 29.98936443883016 43 21.011875736714185 25.295127223580998 27.18234420054752 26.510652839157295 44 18.056571970496876 30.857410528821603 29.481314816450183 21.60470268423134 45 15.672900820512425 41.109937914431725 21.38300690735543 21.834154357700413 46 20.758158089745706 35.054425660499064 25.44287321412802 18.74454303562721 47 19.64207689088375 29.701935518550798 26.13668039946707 24.51930719109838 48 22.569121548722006 23.5015185431201 31.470049568626244 22.45931033953165 49 20.16970823238509 23.867658295161778 33.74536853947252 22.21726493298061 50 18.504263823349856 36.33284315042984 26.188053615514868 18.974839410705442 51 17.091769150729323 35.001055877011446 24.674885869293945 23.232289102965286 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1018.0 1 1480.5 2 1943.0 3 5026.5 4 8110.0 5 6061.0 6 4012.0 7 4435.5 8 4859.0 9 5340.0 10 5821.0 11 5856.5 12 5892.0 13 5684.5 14 5477.0 15 5381.0 16 5285.0 17 5008.5 18 4732.0 19 4236.5 20 3741.0 21 3788.5 22 3836.0 23 3884.5 24 3933.0 25 5472.5 26 7598.5 27 8185.0 28 9282.5 29 10380.0 30 13347.0 31 16314.0 32 20488.5 33 24663.0 34 33198.0 35 41733.0 36 44540.5 37 47348.0 38 52329.0 39 57310.0 40 77446.5 41 97583.0 42 121357.0 43 145131.0 44 148787.0 45 152443.0 46 139934.5 47 127426.0 48 116670.5 49 105915.0 50 96880.0 51 87845.0 52 79539.0 53 71233.0 54 61884.0 55 52535.0 56 48133.0 57 43731.0 58 38451.0 59 33171.0 60 31113.5 61 29056.0 62 27115.0 63 25174.0 64 22533.5 65 19893.0 66 17264.5 67 14636.0 68 12055.0 69 9474.0 70 7727.0 71 5980.0 72 4853.5 73 3727.0 74 3151.0 75 2182.0 76 1789.0 77 1148.0 78 507.0 79 405.0 80 303.0 81 316.5 82 330.0 83 236.0 84 142.0 85 78.5 86 15.0 87 12.0 88 9.0 89 7.5 90 6.0 91 3.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1302235.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.385129019469503 #Duplication Level Percentage of deduplicated Percentage of total 1 81.31893874710694 11.697834256034712 2 7.268567774713562 2.0911857045202584 3 2.333898617678986 1.0072029820102124 4 1.0518305722652854 0.6052287395463428 5 0.5786223501971781 0.41617785805675367 6 0.3940668069810925 0.3401221116428041 7 0.2971127158832258 0.29918033259136323 8 0.25096971697066434 0.2888185406882201 9 0.2064894976856672 0.2673340258836395 >10 2.762008807144444 9.9646253856077 >50 1.3965207140555518 14.771924096417917 >100 2.1232486087159965 55.74563770437434 >500 0.016113700546794812 1.3931812105810208 >1k 0.0010742467031196541 0.6322667542667901 >5k 5.371233515598271E-4 0.47928029777794207 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6203 0.47633491650892507 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4852 0.37259020069342325 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3331 0.2557910054636836 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.022039032893448572 0.0 2 0.0 0.0 0.0 0.07970911548222863 0.0 3 0.0 0.0 0.0 0.11280606035009041 0.0 4 0.0 0.0 0.0 0.1820715923009288 0.0 5 0.0 0.0 0.0 0.28474123334114043 0.0 6 0.0 0.0 0.0 0.39724012946971937 0.0 7 0.0 0.0 0.0 0.45437267467085435 0.0 8 0.0 0.0 0.0 0.6045759789899673 0.0 9 0.0 0.0 0.0 0.6568706877022964 0.0 10 0.0 0.0 0.0 0.7453339834976022 0.0 11 0.0 0.0 0.0 0.8535325805250205 0.0 12 0.0 0.0 0.0 0.9559718483990984 0.0 13 7.679105537786958E-5 0.0 0.0 0.9944441671434111 0.0 14 7.679105537786958E-5 0.0 0.0 1.008727303443695 0.0 15 7.679105537786958E-5 0.0 0.0 1.029921634727987 0.0 16 7.679105537786958E-5 0.0 0.0 1.08820604575979 0.0 17 7.679105537786958E-5 0.0 0.0 1.1587002345966742 0.0 18 7.679105537786958E-5 0.0 0.0 1.2755762208817918 0.0 19 7.679105537786958E-5 0.0 0.0 1.321343689887002 0.0 20 7.679105537786958E-5 0.0 0.0 1.3697988458304378 0.0 21 7.679105537786958E-5 0.0 0.0 1.4336122128494473 0.0 22 7.679105537786958E-5 0.0 0.0 1.4994989383636594 0.0 23 7.679105537786958E-5 0.0 0.0 1.5966396234166644 0.0 24 7.679105537786958E-5 0.0 0.0 1.6624495578754988 0.0 25 7.679105537786958E-5 0.0 0.0 1.7118262064834688 0.0 26 7.679105537786958E-5 0.0 0.0 1.7596670339838816 0.0 27 7.679105537786958E-5 0.0 0.0 1.811117041087054 0.0 28 7.679105537786958E-5 0.0 0.0 1.8601865254735128 0.0 29 7.679105537786958E-5 0.0 0.0 1.917703025951537 0.0 30 7.679105537786958E-5 0.0 0.0 2.003325052697862 0.0 31 7.679105537786958E-5 0.0 0.0 2.076353346362216 0.0 32 7.679105537786958E-5 0.0 0.0 2.142624027153317 0.0 33 7.679105537786958E-5 0.0 0.0 2.201599557683521 0.0 34 1.5358211075573917E-4 0.0 0.0 2.275088597680142 0.0 35 1.5358211075573917E-4 0.0 0.0 2.3848998068704956 0.0 36 1.5358211075573917E-4 0.0 0.0 2.4621516085806325 0.0 37 1.5358211075573917E-4 0.0 0.0 2.5390962460692577 0.0 38 2.3037316613360877E-4 0.0 0.0 2.608284986964718 0.0 39 2.3037316613360877E-4 0.0 0.0 2.687994102446947 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAGTGT 30 2.1657252E-6 45.000004 32 ACGTTAG 30 2.1657252E-6 45.000004 1 CGTGACA 30 2.1657252E-6 45.000004 26 CCCGTGA 30 2.1657252E-6 45.000004 24 ACGGCAT 30 2.1657252E-6 45.000004 39 TAATGCG 60 0.0 45.000004 1 GTAACGT 30 2.1657252E-6 45.000004 9 AACACGT 55 1.8189894E-12 45.000004 41 TAGAGTC 20 7.0336333E-4 45.0 29 AACAAGT 25 3.8910934E-5 45.0 36 GGTAATC 25 3.8910934E-5 45.0 8 CTCGTAG 45 3.8562575E-10 45.0 1 ACGCATA 20 7.0336333E-4 45.0 18 ACACCGA 20 7.0336333E-4 45.0 11 TAGGTCG 20 7.0336333E-4 45.0 1 CGGTTGA 25 3.8910934E-5 45.0 40 GGCGTAG 20 7.0336333E-4 45.0 1 TTATGAG 35 1.2121018E-7 45.0 1 TAGCGCG 25 3.8910934E-5 45.0 1 GCGTTAG 35 1.2121018E-7 45.0 1 >>END_MODULE