SRR1545551_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545551_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1832148
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	7924	0.4324978113121865	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7200	0.39298135303479853	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGGT	40	6.8193913E-9	45.000004	31
ACCGGTT	40	6.8193913E-9	45.000004	32
GCGAATC	25	3.891716E-5	45.000004	9
TTAGCCG	40	6.8193913E-9	45.000004	41
TAGACCG	25	3.891716E-5	45.000004	1
GACGTAT	25	3.891716E-5	45.000004	45
TCGATTG	50	2.1827873E-11	45.000004	1
TACGGAC	25	3.891716E-5	45.000004	19
CCCGTAG	20	7.034384E-4	45.000004	26
CGCTAAC	50	2.1827873E-11	45.000004	13
TATTCCG	20	7.034384E-4	45.000004	35
TCGCTCA	25	3.891716E-5	45.000004	24
GCTTAAC	40	6.8193913E-9	45.000004	28
TCGCTAA	50	2.1827873E-11	45.000004	41
TATTACG	40	6.8193913E-9	45.000004	1
TAGGACG	20	7.034384E-4	45.000004	1
CGATACG	20	7.034384E-4	45.000004	36
AATCGTA	20	7.034384E-4	45.000004	12
TACCGAA	20	7.034384E-4	45.000004	15
AAGTCCG	25	3.891716E-5	45.000004	1