##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545550_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1052785 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.346896089894898 31.0 31.0 33.0 30.0 34.0 2 31.694478929695997 31.0 31.0 34.0 30.0 34.0 3 31.791406602487687 31.0 31.0 34.0 30.0 34.0 4 35.48863918083939 37.0 35.0 37.0 33.0 37.0 5 35.35463271228218 37.0 35.0 37.0 33.0 37.0 6 35.445981848145635 37.0 35.0 37.0 33.0 37.0 7 35.87036004502344 37.0 35.0 37.0 35.0 37.0 8 35.89710339717986 37.0 35.0 37.0 35.0 37.0 9 37.60386213709352 39.0 37.0 39.0 35.0 39.0 10 36.977645958101604 39.0 37.0 39.0 32.0 39.0 11 36.57914293991651 39.0 35.0 39.0 32.0 39.0 12 35.55728852519745 37.0 35.0 39.0 31.0 39.0 13 35.07499821900958 37.0 35.0 39.0 30.0 39.0 14 36.01555018356075 38.0 35.0 40.0 30.0 41.0 15 36.33861804641973 38.0 35.0 40.0 31.0 41.0 16 36.56218506152728 38.0 35.0 40.0 32.0 41.0 17 36.53699568287922 38.0 35.0 40.0 32.0 41.0 18 36.51483731246171 37.0 35.0 40.0 31.0 41.0 19 36.43463575183917 37.0 35.0 40.0 31.0 41.0 20 36.26106564968156 37.0 35.0 40.0 31.0 41.0 21 36.05171521250778 36.0 34.0 40.0 31.0 41.0 22 35.946532292918306 36.0 34.0 40.0 30.0 41.0 23 35.94621503915804 36.0 34.0 40.0 31.0 41.0 24 35.88286402256871 36.0 34.0 40.0 31.0 41.0 25 35.76874290572149 36.0 34.0 40.0 30.0 41.0 26 35.667754574770726 36.0 34.0 40.0 30.0 41.0 27 35.60360282488827 36.0 34.0 40.0 30.0 41.0 28 35.628046562213555 36.0 34.0 40.0 30.0 41.0 29 35.63436884074146 36.0 34.0 40.0 30.0 41.0 30 35.58944608823264 36.0 34.0 40.0 30.0 41.0 31 35.3854946641527 36.0 34.0 40.0 29.0 41.0 32 35.19561543904976 35.0 34.0 40.0 29.0 41.0 33 35.0183836205873 35.0 34.0 40.0 28.0 41.0 34 34.869151821122074 35.0 34.0 40.0 27.0 41.0 35 34.7345317419986 35.0 34.0 40.0 27.0 41.0 36 34.51507287812801 35.0 33.0 40.0 25.0 41.0 37 34.44219000080738 35.0 33.0 40.0 25.0 41.0 38 34.45623085435298 35.0 33.0 40.0 26.0 41.0 39 34.424599514620745 35.0 33.0 40.0 25.0 41.0 40 34.21816515242903 35.0 33.0 40.0 24.0 41.0 41 34.23107282113632 35.0 33.0 40.0 24.0 41.0 42 34.15401055296191 35.0 33.0 40.0 24.0 41.0 43 34.08903337338583 35.0 33.0 40.0 24.0 41.0 44 34.0358895690953 35.0 33.0 40.0 24.0 41.0 45 33.99345735359071 35.0 33.0 40.0 24.0 41.0 46 33.98024097987718 35.0 33.0 39.0 24.0 41.0 47 33.938101321732354 35.0 33.0 39.0 24.0 41.0 48 33.9195372274491 35.0 33.0 39.0 24.0 41.0 49 33.913194051966926 35.0 33.0 39.0 24.0 41.0 50 33.756134443404875 35.0 33.0 39.0 24.0 41.0 51 33.592782002023206 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 3.0 14 4.0 15 27.0 16 115.0 17 259.0 18 582.0 19 1152.0 20 1989.0 21 3106.0 22 4690.0 23 6635.0 24 9705.0 25 13462.0 26 17726.0 27 20758.0 28 22749.0 29 25963.0 30 31102.0 31 37780.0 32 47117.0 33 61561.0 34 108564.0 35 175883.0 36 69444.0 37 82916.0 38 114481.0 39 194916.0 40 95.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.264246736038224 23.97241602036503 28.284977464534546 14.478359779062203 2 30.886363312547193 26.352864070061788 29.75840271280461 13.002369904586406 3 29.252126502562252 24.895776440583788 31.575772831109866 14.276324225744098 4 25.825785891706282 27.64391589925768 31.15916355191231 15.371134657123726 5 23.25641037818738 32.79216554187227 29.870581362766373 14.080842717173972 6 20.293507221322493 42.40751910409058 25.96266094216768 11.33631273241925 7 86.94310804200288 4.7989855478564 6.537707129185922 1.7201992809548008 8 88.43866506456683 3.4841871797185555 6.1520633367686655 1.9250844189459386 9 84.48752594309379 4.87658923711869 7.84367178483736 2.792213034950156 10 53.228721913781065 22.15552083283861 13.828844445922005 10.786912807458313 11 47.29883119535327 19.55593972178555 19.87034389737696 13.274885185484218 12 43.824617561990344 19.57959127457173 24.003856437924174 12.591934725513756 13 20.94815180687415 43.35880545410507 22.217071861776148 13.475970877244642 14 14.662063004317123 44.87611430633985 25.91906229667026 14.542760392672768 15 13.594893544265924 22.272733749056076 49.61696832686636 14.515404379811642 16 14.98321119696804 17.223649653063067 48.38319314959845 19.409946000370446 17 14.60003704460075 18.42683928817375 28.95890423970706 38.01421942751844 18 20.21419378125638 22.711094857924458 37.241886994970486 19.83282436584868 19 29.878275241383566 24.195253541796284 24.992757305622707 20.933713911197444 20 31.72357128948456 22.12892470922363 26.228242233694438 19.919261767597373 21 21.33512540547215 29.072412695849582 28.456332489539648 21.13612940913862 22 22.2496521132045 24.24056193809752 24.469573559653682 29.040212389044296 23 17.64215865537598 31.218814857734483 24.81028890039277 26.32873758649677 24 18.31950493215614 22.627507040848798 42.41872747047118 16.634260556523888 25 16.57992847542471 25.26194807106864 37.65764139876613 20.50048205474052 26 16.420826664513648 35.22894038193933 26.466467512360076 21.88376544118695 27 16.76078211600659 36.937171407267385 27.766827984821212 18.535218491904804 28 14.1365046044539 28.91730030348077 38.53882796582398 18.40736712624135 29 14.367605921436951 24.131897775899162 38.42199499422959 23.078501308434298 30 17.10539188913216 33.48556447897719 31.003196284141588 18.405847347749067 31 28.456522461851186 28.935917590011258 24.24930066442816 18.3582592837094 32 29.60319533428003 26.318859026296913 26.128506770138255 17.9494388692848 33 28.66454214298266 28.866767668612297 23.261919575221913 19.206770613183128 34 18.07425067796369 27.287337870505375 27.44881433531063 27.18959711622031 35 19.392753506176476 25.58756061304065 32.61292666593844 22.40675921484444 36 30.914954145433306 25.323594086161943 25.420289992733558 18.341161775671196 37 19.36387771482306 35.08589123135303 27.690839060206972 17.85939199361693 38 19.248469535565192 34.289052370616986 24.34371690326135 22.118761190556476 39 20.314879106370245 33.37044125818662 26.882791833090323 19.431887802352808 40 25.134476650028258 26.38050504139022 25.170761361531557 23.314256947049966 41 16.658956957023513 25.21084551926557 27.922985224903467 30.207212298807452 42 20.55756873435697 24.842774165665354 25.126497812943764 29.473159287033912 43 21.057100927539814 25.446696144037006 26.501707376149923 26.994495552273257 44 18.380011113380224 29.585242950839913 29.885494189221923 22.149251746557937 45 16.30095413593469 40.010163518667156 22.057685092397783 21.631197253000376 46 20.860859529723545 36.36972411271057 24.836695051696214 17.93272130586967 47 20.1961464116605 28.860593568487392 26.692534563087428 24.250725456764677 48 21.599851821597003 25.100661578574922 32.514805967030306 20.78468063279777 49 21.01540200515775 24.215105648351752 33.520044453520896 21.2494478929696 50 18.897875634626253 35.30074991569979 26.172960291037583 19.628414158636378 51 17.582507349553804 35.54296461290767 24.13636212522025 22.73816591231828 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 859.0 1 1399.0 2 1939.0 3 4647.0 4 7355.0 5 5572.0 6 3789.0 7 4055.5 8 4322.0 9 4758.0 10 5194.0 11 5279.5 12 5365.0 13 5180.0 14 4995.0 15 4902.5 16 4810.0 17 4495.0 18 4180.0 19 4203.0 20 4226.0 21 4302.0 22 4378.0 23 4277.5 24 4177.0 25 4720.5 26 7332.0 27 9400.0 28 10942.5 29 12485.0 30 14144.5 31 15804.0 32 18366.5 33 20929.0 34 26281.5 35 31634.0 36 33990.5 37 36347.0 38 41623.0 39 46899.0 40 62667.0 41 78435.0 42 96967.5 43 115500.0 44 112088.5 45 108677.0 46 103785.0 47 98893.0 48 91832.0 49 84771.0 50 78062.0 51 71353.0 52 63924.5 53 56496.0 54 50727.0 55 44958.0 56 40644.5 57 36331.0 58 33443.0 59 30555.0 60 28064.0 61 25573.0 62 22578.5 63 19584.0 64 17481.0 65 15378.0 66 13029.0 67 10680.0 68 8933.5 69 7187.0 70 6333.0 71 5479.0 72 4460.0 73 3441.0 74 2900.0 75 1830.0 76 1301.0 77 1080.5 78 860.0 79 581.0 80 302.0 81 241.5 82 181.0 83 119.0 84 57.0 85 63.5 86 70.0 87 36.5 88 3.0 89 4.5 90 6.0 91 4.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1052785.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.73461041083163 #Duplication Level Percentage of deduplicated Percentage of total 1 80.06882482172504 13.399205894446938 2 6.845921050599816 2.291276433701981 3 2.367653559772554 1.1886527973183703 4 1.1532359459243335 0.7719581706724243 5 0.6961809787478219 0.5825158727388126 6 0.4845017171152912 0.48647684875820113 7 0.3876196189427016 0.45406643174207856 8 0.283861919664637 0.3800254908846788 9 0.257488114803301 0.38780669579874577 >10 4.094992611715859 17.347635855167386 >50 1.8194437654325923 21.873034298967948 >100 1.5357087320406884 39.56479066963501 >500 0.002283581757681321 0.21495853719044447 >1k 0.002283581757681321 1.0575960029769869 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4097 0.3891582801806637 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3910 0.37139586905208566 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1764 0.16755557877439362 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1299 0.12338701634236811 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.026691109770750912 0.0 2 0.0 0.0 0.0 0.09992543586772228 0.0 3 0.0 0.0 0.0 0.14542380448049697 0.0 4 0.0 0.0 0.0 0.22492721685814293 0.0 5 0.0 0.0 0.0 0.38374406930189925 0.0 6 0.0 0.0 0.0 0.519479285894081 0.0 7 0.0 0.0 0.0 0.5959431412871574 0.0 8 0.0 0.0 0.0 0.7778416295824884 0.0 9 0.0 0.0 0.0 0.8348333230431665 0.0 10 0.0 0.0 0.0 0.9420726929050091 0.0 11 0.0 0.0 0.0 1.0823672449740451 0.0 12 0.0 0.0 0.0 1.187136974785925 0.0 13 0.0 0.0 0.0 1.225891326339186 0.0 14 0.0 0.0 0.0 1.2410891112620335 0.0 15 0.0 0.0 0.0 1.2705348195500505 0.0 16 0.0 0.0 0.0 1.3412045194412914 0.0 17 0.0 0.0 0.0 1.4227026410900612 0.0 18 0.0 0.0 0.0 1.542005252734414 0.0 19 0.0 0.0 0.0 1.5979520984816462 0.0 20 0.0 0.0 0.0 1.6505744287770057 0.0 21 0.0 0.0 0.0 1.7349221350988093 0.0 22 0.0 0.0 0.0 1.814615519787991 0.0 23 0.0 0.0 0.0 1.919765194222942 0.0 24 0.0 0.0 0.0 1.9985087173544456 0.0 25 0.0 0.0 0.0 2.060059746291978 0.0 26 0.0 0.0 0.0 2.1207558998276 0.0 27 1.8997231153559369E-4 0.0 0.0 2.176417787107529 0.0 28 1.8997231153559369E-4 0.0 0.0 2.245282750039182 0.0 29 1.8997231153559369E-4 0.0 0.0 2.313387823724692 0.0 30 1.8997231153559369E-4 0.0 0.0 2.411223564165523 0.0 31 1.8997231153559369E-4 0.0 0.0 2.4978509382257537 0.0 32 1.8997231153559369E-4 0.0 0.0 2.575359641332276 0.0 33 1.8997231153559369E-4 0.0 0.0 2.648783939740783 0.0 34 1.8997231153559369E-4 0.0 0.0 2.7280023936511255 0.0 35 1.8997231153559369E-4 0.0 0.0 2.8484448391646917 0.0 36 1.8997231153559369E-4 0.0 0.0 2.9345972824460835 0.0 37 1.8997231153559369E-4 0.0 0.0 3.0237892827120447 0.0 38 1.8997231153559369E-4 0.0 0.0 3.109751753681901 0.0 39 1.8997231153559369E-4 0.0 0.0 3.198088878545952 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 40 6.8139343E-9 45.000004 1 ACTATCG 20 7.0330146E-4 45.000004 7 TGCCCCG 20 7.0330146E-4 45.000004 22 GTCGATC 20 7.0330146E-4 45.000004 9 GGCGTAT 20 7.0330146E-4 45.000004 8 TAAGTCG 40 6.8139343E-9 45.000004 1 TAACGTG 20 7.0330146E-4 45.000004 17 TCGATTG 45 3.8562575E-10 45.000004 1 CGTTCAC 45 3.8562575E-10 45.000004 21 TCGGCGA 20 7.0330146E-4 45.000004 11 CCCGTTC 20 7.0330146E-4 45.000004 32 GCCGAAT 20 7.0330146E-4 45.000004 41 CTACGAT 20 7.0330146E-4 45.000004 19 TATTCGA 20 7.0330146E-4 45.000004 35 TCGTAAT 20 7.0330146E-4 45.000004 43 TCATCGG 20 7.0330146E-4 45.000004 2 CGTAATC 20 7.0330146E-4 45.000004 44 TTACGAG 40 6.8139343E-9 45.000004 1 ATGCATC 20 7.0330146E-4 45.000004 36 CCCGCAT 20 7.0330146E-4 45.000004 45 >>END_MODULE