##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545549_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1393330 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29716793580846 31.0 31.0 33.0 30.0 34.0 2 31.636671140361578 31.0 31.0 34.0 30.0 34.0 3 31.736785973172186 31.0 31.0 34.0 30.0 34.0 4 35.45657812578499 37.0 35.0 37.0 33.0 37.0 5 35.302607422505794 37.0 35.0 37.0 33.0 37.0 6 35.37741669238443 37.0 35.0 37.0 33.0 37.0 7 35.823840009186625 37.0 35.0 37.0 35.0 37.0 8 35.85156710901222 37.0 35.0 37.0 35.0 37.0 9 37.52752398929184 39.0 37.0 39.0 35.0 39.0 10 36.91419835932622 39.0 37.0 39.0 32.0 39.0 11 36.52916753389362 39.0 35.0 39.0 32.0 39.0 12 35.645912310795005 37.0 35.0 39.0 31.0 39.0 13 35.23679889186338 37.0 35.0 39.0 30.0 39.0 14 36.16549991746392 38.0 35.0 40.0 30.0 41.0 15 36.446589106672505 38.0 35.0 40.0 31.0 41.0 16 36.633168021933066 38.0 35.0 40.0 32.0 41.0 17 36.58157148701313 38.0 35.0 40.0 31.0 41.0 18 36.50930648159445 38.0 35.0 40.0 31.0 41.0 19 36.46606690446628 37.0 35.0 40.0 31.0 41.0 20 36.28873059504927 37.0 35.0 40.0 31.0 41.0 21 36.10420288086814 37.0 35.0 40.0 30.0 41.0 22 36.01739932392183 37.0 34.0 40.0 30.0 41.0 23 35.96060660432202 37.0 34.0 40.0 30.0 41.0 24 35.898268177675064 37.0 34.0 40.0 30.0 41.0 25 35.76152383139672 36.0 34.0 40.0 30.0 41.0 26 35.662596082765745 36.0 34.0 40.0 30.0 41.0 27 35.595548075473864 36.0 34.0 40.0 30.0 41.0 28 35.607979444926904 36.0 34.0 40.0 30.0 41.0 29 35.60229522080196 36.0 34.0 40.0 30.0 41.0 30 35.54289149017103 36.0 34.0 40.0 30.0 41.0 31 35.359846554656826 36.0 34.0 40.0 29.0 41.0 32 35.16623484745179 36.0 34.0 40.0 29.0 41.0 33 35.015099796889466 36.0 34.0 40.0 27.0 41.0 34 34.8688185856904 36.0 34.0 40.0 27.0 41.0 35 34.72866657575736 36.0 34.0 40.0 26.0 41.0 36 34.546128340019955 35.0 33.0 40.0 25.0 41.0 37 34.463240581915265 35.0 33.0 40.0 25.0 41.0 38 34.441329763946804 35.0 33.0 40.0 25.0 41.0 39 34.390313134720415 35.0 33.0 40.0 24.0 41.0 40 34.213678023153165 35.0 33.0 40.0 24.0 41.0 41 34.196383484171015 35.0 33.0 40.0 24.0 41.0 42 34.13265773363094 35.0 33.0 40.0 24.0 41.0 43 34.05703889243754 35.0 33.0 40.0 24.0 41.0 44 33.99523156753963 35.0 33.0 40.0 23.0 41.0 45 33.94033287160974 35.0 33.0 40.0 23.0 41.0 46 33.89510094521757 35.0 33.0 39.0 23.0 41.0 47 33.85716520852921 35.0 33.0 39.0 23.0 41.0 48 33.81961487946143 35.0 33.0 39.0 23.0 41.0 49 33.76476929370644 35.0 33.0 39.0 24.0 41.0 50 33.615833291467204 35.0 33.0 39.0 24.0 41.0 51 33.44033574243001 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 3.0 12 1.0 13 8.0 14 13.0 15 45.0 16 158.0 17 398.0 18 891.0 19 1734.0 20 2901.0 21 4487.0 22 6709.0 23 9191.0 24 12695.0 25 17779.0 26 23597.0 27 28098.0 28 31581.0 29 36088.0 30 41832.0 31 51424.0 32 63191.0 33 81054.0 34 138529.0 35 211179.0 36 98524.0 37 115922.0 38 159484.0 39 255645.0 40 166.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.22855317835688 23.697688271981512 26.982552589838733 14.091205959822869 2 32.17816310565336 24.706709824664653 29.332318976839655 13.782808092842327 3 29.263491060983398 25.607286141832873 31.269907344275943 13.859315452907783 4 26.505063409242606 27.51107060064737 30.401699525596953 15.582166464513072 5 23.847186237287648 32.10467010686629 29.627152218067508 14.42099143777856 6 21.284835609654568 41.88921504596901 26.456403005748818 10.369546338627604 7 85.93211945483124 4.913050031220171 7.157959708037579 1.9968708059110192 8 87.12451465194893 3.9534065870970982 6.8009014375632475 2.1211773233907256 9 82.77845162309 5.688171502802638 8.554900849045094 2.978476025062261 10 51.23438094349508 22.23342639575693 14.139220428757007 12.392972231990985 11 44.47072839887177 20.920384976997553 19.463802544982165 15.145084079148516 12 40.79148514709365 20.05289486338484 25.24527570640121 13.910344283120294 13 22.168330546245326 38.736552001320575 24.213431132610367 14.88168631982373 14 16.284512642374743 40.420288086813606 27.647649874760464 15.647549396051186 15 15.951066868581027 23.014433048882893 46.19465596807648 14.839844114459606 16 17.071260936030946 18.159660669044662 45.15549080260958 19.61358759231481 17 17.91535386448293 18.11121557707076 29.76566929585956 34.20776126258675 18 21.535529989306195 22.769910932801274 34.81666224081876 20.877896837073774 19 29.748587915282094 23.011203376084634 25.98257412099072 21.257634587642553 20 30.850552274048503 22.559766889394474 25.931329979258322 20.6583508572987 21 22.909863420725888 26.00417704348575 29.41995076543245 21.66600877035591 22 23.799458850380027 23.320031866104944 24.988624374699462 27.891884908815573 23 20.194856925495035 29.30949595573195 25.370658781480337 25.124988337292674 24 19.929880215024436 22.89830836915878 39.185261208758874 17.98655020705791 25 18.681647563750154 24.534173526730925 35.74781279381051 21.03636611570841 26 18.01863162352063 32.79538946265422 27.162481249955146 22.02349766387001 27 18.508824183789912 33.14555776449226 28.450402991394718 19.89521506032311 28 16.5509247629779 28.20021100528949 37.01441869478156 18.234445536951046 29 16.716284010248827 24.65855181471726 36.02829193371276 22.59687224132115 30 19.432295292572473 30.69122174933433 30.223349816626353 19.653133141466846 31 28.281814071325527 27.284060488182988 25.141567324323745 19.292558116167744 32 29.655788650212084 25.67561166414274 26.55738410857442 18.11121557707076 33 28.152627159395117 27.422075172428645 24.498575355443432 19.926722312732807 34 19.477510711748113 28.155354438646985 28.57348941026175 23.793645439343155 35 21.554405632549358 24.639604400967468 30.85227476620758 22.9537152002756 36 30.96617456022622 25.41551534812284 24.218813920607467 19.39949617104347 37 21.023303883502116 33.272232708690694 27.132840030717777 18.57162337708942 38 21.00988279876268 32.469623133069696 24.29388587054036 22.226608197627268 39 21.90428685236089 30.87689204998098 26.566929585955947 20.651891511702182 40 24.047138868753272 26.320541436702 25.380060717848608 24.25225897669612 41 18.445522596944013 25.231495769128635 27.32683571013328 28.996145923794074 42 21.900195933483094 25.397142098426073 25.117452434096734 27.5852095339941 43 21.411797635879513 26.01436845542693 26.70580551628114 25.868028392412423 44 19.44593168883179 28.98272483905464 28.51104906949538 23.06029440261819 45 18.464613551707064 36.00044497714109 23.542807518678273 21.99213395247357 46 22.101081581534885 32.64854700609332 25.679917894540417 19.570453517831382 47 21.991846870447056 28.21872779599951 26.735949129064903 23.053476204488526 48 21.88706193077017 24.844078574350657 31.067227433558454 22.20163206132072 49 21.297538989327723 25.35651999167462 31.93773190844954 21.408209110548114 50 20.507345711353373 32.92701657180998 26.772049693898794 19.793588022937854 51 19.839664688193036 32.729647678582964 25.023648381933928 22.407039251290076 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1432.0 1 2248.0 2 3064.0 3 6559.0 4 10054.0 5 7631.0 6 5208.0 7 5305.0 8 5402.0 9 5721.5 10 6041.0 11 6219.0 12 6397.0 13 6431.0 14 6465.0 15 6317.5 16 6170.0 17 6040.0 18 5910.0 19 5764.5 20 5619.0 21 5366.0 22 5113.0 23 5765.5 24 6418.0 25 6573.0 26 8144.5 27 9561.0 28 13027.5 29 16494.0 30 19255.5 31 22017.0 32 24682.0 33 27347.0 34 31270.0 35 35193.0 36 38062.0 37 40931.0 38 49064.0 39 57197.0 40 72173.5 41 87150.0 42 106603.0 43 126056.0 44 134757.0 45 143458.0 46 134781.0 47 126104.0 48 119030.0 49 111956.0 50 104421.0 51 96886.0 52 87798.5 53 78711.0 54 71619.5 55 64528.0 56 60255.5 57 55983.0 58 51489.0 59 46995.0 60 45927.0 61 44859.0 62 38942.0 63 33025.0 64 29066.0 65 25107.0 66 22635.5 67 20164.0 68 16920.0 69 13676.0 70 12453.0 71 11230.0 72 9320.0 73 7410.0 74 6172.5 75 3861.5 76 2788.0 77 2431.5 78 2075.0 79 1425.0 80 775.0 81 540.5 82 306.0 83 290.0 84 274.0 85 178.5 86 83.0 87 51.0 88 19.0 89 14.5 90 10.0 91 7.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1393330.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.66120416188149 #Duplication Level Percentage of deduplicated Percentage of total 1 80.46275030687677 13.406063102893661 2 6.922515658418788 2.3067489339747373 3 2.366026636374464 1.18262558523254 4 1.2097447130355812 0.806232145905702 5 0.6868118883763498 0.5721556546522861 6 0.47109046785109915 0.4709360678150058 7 0.34342133759061816 0.4005269113400599 8 0.2747883544823438 0.3662643900270233 9 0.236966994163401 0.35533399224454226 >10 3.728309791299711 15.70932724025046 >50 1.7364998779713086 20.775310789809733 >100 1.5498120636504331 41.724402289540066 >500 0.008229857241296318 0.8010655695243061 >1k 0.002598902286725153 0.741526912329932 >5k 4.331503811208589E-4 0.3814804144599533 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5286 0.37937889803564123 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3568 0.25607716764872646 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1644 0.11799071289644233 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1580 0.11339740047224993 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.021602922495029892 0.0 2 0.0 0.0 0.0 0.0809571314763911 0.0 3 0.0 0.0 0.0 0.1151916631379501 0.0 4 0.0 0.0 0.0 0.18229708683513596 0.0 5 0.0 0.0 0.0 0.31227347433845537 0.0 6 0.0 0.0 0.0 0.433852712566298 0.0 7 0.0 0.0 0.0 0.5048337436213962 0.0 8 0.0 0.0 0.0 0.6767958775020992 0.0 9 0.0 0.0 0.0 0.730982610006244 0.0 10 0.0 0.0 0.0 0.8354804676566212 0.0 11 7.177050662800628E-5 0.0 0.0 0.9605046902026081 0.0 12 7.177050662800628E-5 0.0 0.0 1.0690216962241537 0.0 13 1.4354101325601257E-4 0.0 0.0 1.1092849504424651 0.0 14 2.1531151988401885E-4 0.0 0.0 1.1254333144337665 0.0 15 2.1531151988401885E-4 0.0 0.0 1.1558640092440413 0.0 16 2.1531151988401885E-4 0.0 0.0 1.2249072366201832 0.0 17 2.1531151988401885E-4 0.0 0.0 1.301916990232034 0.0 18 2.1531151988401885E-4 0.0 0.0 1.414453144624748 0.0 19 2.1531151988401885E-4 0.0 0.0 1.4696446642216847 0.0 20 2.1531151988401885E-4 0.0 0.0 1.5212476584872212 0.0 21 2.8708202651202513E-4 0.0 0.0 1.6009846913509362 0.0 22 2.8708202651202513E-4 0.0 0.0 1.6767743463501108 0.0 23 2.8708202651202513E-4 0.0 0.0 1.7745975468840836 0.0 24 2.8708202651202513E-4 0.0 0.0 1.850746054416398 0.0 25 2.8708202651202513E-4 0.0 0.0 1.9118227555568315 0.0 26 2.8708202651202513E-4 0.0 0.0 1.9767032935485491 0.0 27 2.8708202651202513E-4 0.0 0.0 2.0370622896227024 0.0 28 2.8708202651202513E-4 0.0 0.0 2.10337823774698 0.0 29 2.8708202651202513E-4 0.0 0.0 2.1734980227225424 0.0 30 2.8708202651202513E-4 0.0 0.0 2.2662972877925545 0.0 31 2.8708202651202513E-4 0.0 0.0 2.3549338634781423 0.0 32 2.8708202651202513E-4 0.0 0.0 2.4368957820473254 0.0 33 2.8708202651202513E-4 0.0 0.0 2.5271113088787294 0.0 34 2.8708202651202513E-4 0.0 0.0 2.6094320799810524 0.0 35 2.8708202651202513E-4 0.0 0.0 2.7238342675460947 0.0 36 2.8708202651202513E-4 0.0 0.0 2.8162746800829668 0.0 37 2.8708202651202513E-4 0.0 0.0 2.911083519338563 0.0 38 2.8708202651202513E-4 0.0 0.0 3.002662685795899 0.0 39 2.8708202651202513E-4 0.0 0.0 3.0963949674520754 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATAT 145 0.0 45.000004 9 ATGCGAG 60 0.0 45.000004 1 TATCCGG 30 2.1658343E-6 45.000004 2 TAGACGT 35 1.2121745E-7 45.0 22 CGTTACA 20 7.0338027E-4 45.0 35 ACCTAGT 20 7.0338027E-4 45.0 9 TACGATA 35 1.2121745E-7 45.0 42 CTACGAT 35 1.2121745E-7 45.0 41 TGACACG 50 2.1827873E-11 45.0 1 TCTAACG 50 2.1827873E-11 45.0 1 ACTACGT 20 7.0338027E-4 45.0 17 TCGTCGG 25 3.8912334E-5 45.0 33 GAACGTA 25 3.8912334E-5 45.0 20 TCGTAAG 20 7.0338027E-4 45.0 1 TTACGTA 25 3.8912334E-5 45.0 21 AACCTAG 25 3.8912334E-5 45.0 31 ACCGTTG 20 7.0338027E-4 45.0 1 ACGTATG 45 3.8562575E-10 45.0 1 TCGAGTA 25 3.8912334E-5 45.0 26 CACAACG 20 7.0338027E-4 45.0 12 >>END_MODULE