##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545548_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2254604 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.323620910811833 31.0 31.0 33.0 30.0 34.0 2 31.668413167012922 31.0 31.0 34.0 30.0 34.0 3 31.769356392519484 31.0 31.0 34.0 30.0 34.0 4 35.462807659349494 37.0 35.0 37.0 33.0 37.0 5 35.32177579743494 37.0 35.0 37.0 33.0 37.0 6 35.40674592966215 37.0 35.0 37.0 33.0 37.0 7 35.86800209704232 37.0 35.0 37.0 35.0 37.0 8 35.898438484097426 37.0 35.0 37.0 35.0 37.0 9 37.6214093472734 39.0 37.0 39.0 35.0 39.0 10 36.9455301241371 39.0 37.0 39.0 32.0 39.0 11 36.511467202222654 39.0 35.0 39.0 32.0 39.0 12 35.51053666187055 37.0 35.0 39.0 31.0 39.0 13 35.03901971255262 37.0 34.0 39.0 30.0 39.0 14 35.96268080780483 38.0 35.0 40.0 30.0 41.0 15 36.29819649038146 38.0 35.0 40.0 31.0 41.0 16 36.54259373264662 38.0 35.0 40.0 32.0 41.0 17 36.49460082568824 38.0 35.0 40.0 32.0 41.0 18 36.471193610940105 37.0 35.0 40.0 31.0 41.0 19 36.40620969358699 37.0 35.0 40.0 31.0 41.0 20 36.244088097067156 37.0 35.0 40.0 31.0 41.0 21 36.02582493422348 36.0 34.0 40.0 31.0 41.0 22 35.95404159666177 36.0 34.0 40.0 30.0 41.0 23 35.9211063228842 36.0 34.0 40.0 30.0 41.0 24 35.86844829513298 36.0 34.0 40.0 30.0 41.0 25 35.779100454004336 36.0 34.0 40.0 30.0 41.0 26 35.68139371703412 36.0 34.0 40.0 30.0 41.0 27 35.63579280441266 36.0 34.0 40.0 30.0 41.0 28 35.64654058983307 36.0 34.0 40.0 30.0 41.0 29 35.69161058882181 36.0 34.0 40.0 30.0 41.0 30 35.619120253490195 36.0 34.0 40.0 30.0 41.0 31 35.4232344127838 36.0 34.0 40.0 30.0 41.0 32 35.23499559124352 35.0 34.0 40.0 29.0 41.0 33 35.03255782390167 35.0 34.0 40.0 28.0 41.0 34 34.88512794264536 35.0 34.0 40.0 27.0 41.0 35 34.72347605167027 35.0 34.0 40.0 27.0 41.0 36 34.533338005255025 35.0 33.0 40.0 25.0 41.0 37 34.45774867781659 35.0 33.0 40.0 25.0 41.0 38 34.486863768537624 35.0 33.0 40.0 26.0 41.0 39 34.45944609341596 35.0 33.0 40.0 26.0 41.0 40 34.29674789896585 35.0 33.0 40.0 24.0 41.0 41 34.30690444973929 35.0 33.0 40.0 24.0 41.0 42 34.23861973100376 35.0 33.0 40.0 24.0 41.0 43 34.155490720321616 35.0 33.0 40.0 24.0 41.0 44 34.0828872830883 35.0 33.0 40.0 24.0 41.0 45 34.064309297774685 35.0 33.0 40.0 24.0 41.0 46 34.04367862382929 35.0 33.0 39.0 24.0 41.0 47 34.009544469893605 35.0 33.0 39.0 24.0 41.0 48 34.00119267064194 35.0 33.0 39.0 24.0 41.0 49 33.95488609086119 35.0 33.0 39.0 24.0 41.0 50 33.80618636354765 35.0 33.0 39.0 24.0 41.0 51 33.64558476787941 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 1.0 12 4.0 13 4.0 14 21.0 15 55.0 16 175.0 17 421.0 18 1158.0 19 2206.0 20 3812.0 21 6261.0 22 9601.0 23 13874.0 24 19766.0 25 28232.0 26 37728.0 27 43994.0 28 48927.0 29 55769.0 30 66827.0 31 82043.0 32 102232.0 33 133870.0 34 234845.0 35 377790.0 36 148815.0 37 175353.0 38 245758.0 39 414863.0 40 196.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.51706286336758 23.531094595769368 29.238172202302486 14.713670338560563 2 29.616376090878934 25.60316578875936 31.195766529288516 13.5846915910732 3 27.96584233861024 25.344184610689947 32.8758398370623 13.814133213637517 4 25.113234962769514 27.814463205068385 31.597256103510862 15.47504572865124 5 22.00909782826607 32.702195152674264 30.885822964919786 14.402884054139884 6 20.71312744943236 40.88026101257693 27.396474059302655 11.010137478688053 7 87.99061830813748 4.140904566833022 6.2108467828496705 1.657630342179824 8 89.27532285048727 2.9031705789575466 5.977679450582009 1.8438271199731748 9 85.86204051798009 4.31477101965578 7.45354838366294 2.369640078701182 10 54.74655416206128 21.97596562411847 13.242369835234925 10.03511037858533 11 46.43658043718542 19.301482655047185 20.53504739634987 13.726889511417525 12 44.04400950233389 19.90513633436293 24.170186870953835 11.880667292349344 13 20.86676862100839 42.652634342882386 22.940525254102273 13.540071782006951 14 14.6245637814889 43.646866589432115 27.181935275551716 14.54663435352727 15 12.270225724783598 23.54262655437496 48.67014340434063 15.517004316500813 16 14.649224431430085 17.464973893419863 47.66007689155169 20.225724783598363 17 14.68798955381965 18.81532189244763 28.655808292720142 37.84088026101258 18 18.90438409583235 22.324363835068155 37.369711044600294 21.401541024499203 19 27.511971060106344 24.16876755297161 25.283508766949765 23.03575261997229 20 30.49582099561608 21.292652723050256 27.74779961359068 20.463726667742982 21 20.302944552568878 28.90316880481007 29.41824817129749 21.375638471323565 22 23.107783007570287 24.19852887691142 24.331013339814884 28.362674775703407 23 17.633340489061496 30.473688505830737 24.796017393741874 27.096953611365898 24 18.261832233066205 22.853503320317003 42.58832149681274 16.296342949804046 25 15.820560949949524 25.636697176089456 37.41863316130017 21.12410871266085 26 16.52197015529113 33.341065659424004 27.958967517133832 22.17799666815104 27 15.946924604054635 36.526946638966315 27.057301415237443 20.468827341741612 28 13.169452373898032 29.374737204404855 37.427991789245475 20.02781863245164 29 14.268137553202248 22.87980505667514 37.352191338257185 25.49986605186543 30 16.332757326785547 33.658371935825535 31.798355720117588 18.210515017271327 31 27.4991971982663 29.42077633145333 24.604897356697673 18.475129113582696 32 29.771259165689408 25.381885244592844 26.334602440162442 18.51225314955531 33 28.356199137409497 29.25156701575975 23.60645150988821 18.785782336942543 34 19.232823147656973 26.699101039473007 27.304839342075148 26.763236470794872 35 18.963374499468642 26.015433308909238 31.90941735222682 23.1117748393953 36 31.13229640327082 25.538276344759435 25.393505910572323 17.935921341397425 37 19.562060565846597 33.22707668397643 28.89101589458725 18.319846855589716 38 19.80161482903428 33.35636768141988 25.049321299882376 21.792696189663463 39 19.453881923388764 33.49155771922697 27.24531669419552 19.809243663188745 40 24.49942428914346 27.083558797908637 25.04896647038682 23.36805044256109 41 16.576702604980742 24.66180313704757 28.49866317987549 30.262831078096198 42 20.324456090736998 25.117670331463977 24.96708956428712 29.590784013511907 43 20.550792955215194 25.260799679234136 27.579654786383774 26.608752579166893 44 17.915163815907363 29.185568729586215 29.432796180615313 23.466471273891113 45 15.763655169599627 38.79874248426775 23.019740938985294 22.41786140714733 46 20.395776819343887 34.075296593104596 26.340767602647734 19.18815898490378 47 19.71255262564956 29.892167316300334 26.562846513179256 23.832433544870852 48 21.102818942927453 25.618334749694405 31.280526425039607 21.998319882338542 49 20.720046624595717 24.36862526634389 33.156155138552045 21.755172970508347 50 19.730515868862113 33.72312831876463 27.200563824068443 19.34579198830482 51 17.238503967880835 33.622401095713485 24.355274806573572 24.78382012983211 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1828.0 1 2654.5 2 3481.0 3 9451.0 4 15421.0 5 11363.0 6 7305.0 7 7814.0 8 8323.0 9 9136.5 10 9950.0 11 10446.5 12 10943.0 13 10836.0 14 10729.0 15 10476.5 16 10224.0 17 9363.5 18 8503.0 19 8220.5 20 7938.0 21 7999.0 22 8060.0 23 8239.0 24 8418.0 25 10357.0 26 14354.0 27 16412.0 28 17871.5 29 19331.0 30 27972.0 31 36613.0 32 41878.5 33 47144.0 34 59737.5 35 72331.0 36 72938.0 37 73545.0 38 89523.0 39 105501.0 40 134021.0 41 162541.0 42 196931.0 43 231321.0 44 238033.0 45 244745.0 46 237277.5 47 229810.0 48 204737.5 49 179665.0 50 168600.5 51 157536.0 52 142239.5 53 126943.0 54 115876.5 55 104810.0 56 90318.5 57 75827.0 58 68492.0 59 61157.0 60 58032.0 61 54907.0 62 48569.5 63 42232.0 64 36032.0 65 29832.0 66 25637.5 67 21443.0 68 17994.0 69 14545.0 70 11610.0 71 8675.0 72 7460.5 73 6246.0 74 5252.5 75 3053.5 76 1848.0 77 1376.5 78 905.0 79 746.0 80 587.0 81 459.0 82 331.0 83 212.5 84 94.0 85 56.5 86 19.0 87 14.5 88 10.0 89 13.0 90 16.0 91 9.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2254604.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.87967458420135 #Duplication Level Percentage of deduplicated Percentage of total 1 79.78949207028923 11.872416772446178 2 8.566041294441645 2.549198138722452 3 3.074163650239872 1.372276642024496 4 1.5415536135048353 0.917512644922066 5 0.8700170804536247 0.647278551992343 6 0.5696772152223731 0.5085966948325769 7 0.3921322536005009 0.40843602292814796 8 0.2553414855790268 0.3039518570609968 9 0.21181033212662295 0.28365019340541825 >10 2.085442395947205 7.199556580893095 >50 0.8258267767026338 9.058431694223279 >100 1.7761132125674859 59.99161910996421 >500 0.04088547679571566 3.786520331856987 >1k 6.012570117017009E-4 0.10467415150441062 >5k 9.018855175525512E-4 0.9958806132233733 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9134 0.4051265765518024 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 7542 0.33451550693602955 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 5587 0.2478040489593738 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04009573299790118 0.0 2 0.0 0.0 0.0 0.14250839615293862 0.0 3 0.0 0.0 0.0 0.20136573872839753 0.0 4 0.0 0.0 0.0 0.32134246191348903 0.0 5 0.0 0.0 0.0 0.5387642353158248 0.0 6 0.0 0.0 0.0 0.7367590938364342 0.0 7 0.0 0.0 0.0 0.8556713285348558 0.0 8 0.0 0.0 0.0 1.1551030690977218 0.0 9 0.0 0.0 0.0 1.2472700305685611 0.0 10 0.0 0.0 0.0 1.4262371573899453 0.0 11 0.0 0.0 0.0 1.6582956474839927 0.0 12 0.0 0.0 0.0 1.842008618808447 0.0 13 4.435368694458096E-5 0.0 0.0 1.9089383324078197 0.0 14 4.435368694458096E-5 0.0 0.0 1.932933677044838 0.0 15 4.435368694458096E-5 0.0 0.0 1.9747148501466334 0.0 16 4.435368694458096E-5 0.0 0.0 2.0787685997186203 0.0 17 4.435368694458096E-5 0.0 0.0 2.2070394623623484 0.0 18 4.435368694458096E-5 0.0 0.0 2.37939788982899 0.0 19 8.870737388916192E-5 0.0 0.0 2.465577103562311 0.0 20 8.870737388916192E-5 0.0 0.0 2.544925849506166 0.0 21 8.870737388916192E-5 0.0 0.0 2.662418766222361 0.0 22 8.870737388916192E-5 0.0 0.0 2.7879397002755253 0.0 23 8.870737388916192E-5 0.0 0.0 2.9411373349821077 0.0 24 8.870737388916192E-5 0.0 0.0 3.0543279440646782 0.0 25 8.870737388916192E-5 0.0 0.0 3.1414829389107797 0.0 26 8.870737388916192E-5 0.0 0.0 3.2316096307821685 0.0 27 8.870737388916192E-5 0.0 0.0 3.3181436740110457 0.0 28 8.870737388916192E-5 0.0 0.0 3.4116412460902223 0.0 29 8.870737388916192E-5 0.0 0.0 3.5158724104099877 0.0 30 8.870737388916192E-5 0.0 0.0 3.651772107208184 0.0 31 8.870737388916192E-5 0.0 0.0 3.7768051507049574 0.0 32 8.870737388916192E-5 0.0 0.0 3.883963658363065 0.0 33 8.870737388916192E-5 0.0 0.0 3.989702848038946 0.0 34 8.870737388916192E-5 0.0 0.0 4.105288556216524 0.0 35 8.870737388916192E-5 0.0 0.0 4.278400996361223 0.0 36 8.870737388916192E-5 0.0 0.0 4.406716212691896 0.0 37 8.870737388916192E-5 0.0 0.0 4.535652380639793 0.0 38 8.870737388916192E-5 0.0 0.0 4.657358897615723 0.0 39 8.870737388916192E-5 0.0 0.0 4.78097262313027 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTA 20 7.03473E-4 45.000004 15 AACCGGC 20 7.03473E-4 45.000004 34 TCCGAAC 20 7.03473E-4 45.000004 36 CACGCGA 20 7.03473E-4 45.000004 33 TAGCCGT 35 1.2126293E-7 45.000004 44 CCGTAGT 35 1.2126293E-7 45.000004 40 CGAGGTA 20 7.03473E-4 45.000004 21 CGCTACG 20 7.03473E-4 45.000004 33 CGATCAT 35 1.2126293E-7 45.000004 10 GTGCGTA 20 7.03473E-4 45.000004 21 CAATACG 20 7.03473E-4 45.000004 1 CCGTTAT 35 1.2126293E-7 45.000004 37 GACTATC 20 7.03473E-4 45.000004 28 TACCGTT 35 1.2126293E-7 45.000004 36 CCTTACG 25 3.8920036E-5 45.0 29 TCGTTAG 45 3.8562575E-10 45.0 1 TACCCGC 25 3.8920036E-5 45.0 14 ATCTACG 105 0.0 45.0 1 ACGTTGT 45 3.8562575E-10 45.0 14 ACGCATC 25 3.8920036E-5 45.0 24 >>END_MODULE