SRR1545547_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545547_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2144451
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	6374	0.29723225198430736	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6154	0.2869732159886143	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	3636	0.1695538858197273	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACTA	25	3.891939E-5	45.000004	45
GTCGACA	50	2.1827873E-11	45.000004	23
GCGCAAA	25	3.891939E-5	45.000004	1
TAGCACG	65	0.0	45.000004	1
TCGCTAG	25	3.891939E-5	45.000004	17
TATTACG	50	2.1827873E-11	45.000004	1
TGTACGA	25	3.891939E-5	45.000004	22
ACTATCG	20	7.034656E-4	45.0	27
GACCGTT	40	6.8193913E-9	45.0	9
TATATCG	20	7.034656E-4	45.0	26
TCGATAG	35	1.2125929E-7	45.0	1
CCCGTTA	20	7.034656E-4	45.0	22
CCGTACA	20	7.034656E-4	45.0	25
AACGATC	35	1.2125929E-7	45.0	23
ACGTAGA	35	1.2125929E-7	45.0	43
CCGTTCG	20	7.034656E-4	45.0	36
CCGTTAT	20	7.034656E-4	45.0	23
CTTACGA	20	7.034656E-4	45.0	27
TTTACGT	30	2.1663855E-6	44.999996	13
CGCTCGT	30	2.1663855E-6	44.999996	18