##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545547_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2144451 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.319898193057337 31.0 31.0 33.0 30.0 34.0 2 31.656267734725578 31.0 31.0 34.0 30.0 34.0 3 31.769998941454013 31.0 31.0 34.0 30.0 34.0 4 35.4761395807132 37.0 35.0 37.0 33.0 37.0 5 35.32637071213098 37.0 35.0 37.0 33.0 37.0 6 35.39529138226987 37.0 35.0 37.0 33.0 37.0 7 35.87030246902354 37.0 35.0 37.0 35.0 37.0 8 35.901638228152564 37.0 35.0 37.0 35.0 37.0 9 37.62884066831091 39.0 37.0 39.0 35.0 39.0 10 36.90063703950335 39.0 37.0 39.0 32.0 39.0 11 36.51551749142321 39.0 35.0 39.0 32.0 39.0 12 35.5991491528601 37.0 35.0 39.0 31.0 39.0 13 35.16255069479321 37.0 35.0 39.0 30.0 39.0 14 36.12093258367759 38.0 35.0 40.0 30.0 41.0 15 36.40294742104156 38.0 35.0 40.0 31.0 41.0 16 36.612999317774104 38.0 35.0 40.0 32.0 41.0 17 36.58143646089372 38.0 35.0 40.0 32.0 41.0 18 36.54394154960873 38.0 35.0 40.0 31.0 41.0 19 36.49272517767951 37.0 35.0 40.0 31.0 41.0 20 36.34722033751296 37.0 35.0 40.0 31.0 41.0 21 36.142418735611116 37.0 35.0 40.0 31.0 41.0 22 36.04859751983142 37.0 34.0 40.0 30.0 41.0 23 36.03120332430072 37.0 34.0 40.0 30.0 41.0 24 35.96229198055819 37.0 34.0 40.0 30.0 41.0 25 35.874915304663055 36.0 34.0 40.0 30.0 41.0 26 35.77166230424477 36.0 34.0 40.0 30.0 41.0 27 35.711681451336496 36.0 34.0 40.0 30.0 41.0 28 35.73299553125718 36.0 34.0 40.0 30.0 41.0 29 35.75642530419208 36.0 34.0 40.0 30.0 41.0 30 35.68256304294199 36.0 34.0 40.0 30.0 41.0 31 35.520751465060286 36.0 34.0 40.0 30.0 41.0 32 35.31694965284821 36.0 34.0 40.0 29.0 41.0 33 35.14155697658748 36.0 34.0 40.0 28.0 41.0 34 34.994937165736125 36.0 34.0 40.0 27.0 41.0 35 34.863589328923815 36.0 34.0 40.0 27.0 41.0 36 34.66464377129624 36.0 33.0 40.0 25.0 41.0 37 34.59574548450862 36.0 33.0 40.0 25.0 41.0 38 34.62872268939696 35.0 33.0 40.0 26.0 41.0 39 34.57821885414962 36.0 33.0 40.0 26.0 41.0 40 34.41069998801558 35.0 33.0 40.0 24.0 41.0 41 34.44363429148066 35.0 33.0 40.0 25.0 41.0 42 34.375543670617795 35.0 33.0 40.0 25.0 41.0 43 34.28959813024406 35.0 33.0 40.0 24.0 41.0 44 34.217877209598164 35.0 33.0 40.0 24.0 41.0 45 34.17416345722052 35.0 33.0 40.0 24.0 41.0 46 34.15570325458591 35.0 33.0 40.0 24.0 41.0 47 34.10518076654584 35.0 33.0 40.0 24.0 41.0 48 34.10335325917916 35.0 33.0 40.0 24.0 41.0 49 34.08030213793647 35.0 33.0 39.0 24.0 41.0 50 33.929331563183304 35.0 33.0 39.0 24.0 41.0 51 33.75503846905338 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 3.0 13 6.0 14 21.0 15 65.0 16 170.0 17 526.0 18 1152.0 19 2227.0 20 3981.0 21 6271.0 22 9298.0 23 13484.0 24 19057.0 25 26855.0 26 34613.0 27 40703.0 28 45847.0 29 52198.0 30 61818.0 31 76229.0 32 95780.0 33 123316.0 34 214982.0 35 335567.0 36 144819.0 37 175016.0 38 248221.0 39 412053.0 40 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.15170083158814 23.348400126652464 28.16497089464856 13.334928147110844 2 30.285653530903712 26.263505204828647 29.828706741259186 13.622134523008453 3 27.62427306569374 25.65220655543074 31.533758523743373 15.189761855132152 4 25.785154335538557 28.285467935616154 31.377075064900062 14.552302663945223 5 22.77422053476624 32.47288000518548 30.61632091383762 14.136578546210663 6 20.23221794296069 41.257599264333855 27.649594231810383 10.860588560895073 7 88.12525909894887 4.354401196390125 6.072370037832527 1.4479696668284796 8 89.39677334665143 3.325279990076714 5.686910076285259 1.5910365869865994 9 86.168674406643 4.416421732182269 6.982020106777911 2.432883754396813 10 52.14378878323637 20.83824717841536 15.140005530553042 11.877958507795235 11 45.623798352119024 21.044453801928793 19.144853391380824 14.186894454571355 12 41.00140315633232 20.82523685549355 24.29372366167378 13.87963632650035 13 21.007241480453505 41.28585824530381 23.792569753284173 13.914330520958512 14 15.702527126989613 42.88659428450452 27.047668610753988 14.36320997775188 15 14.782105070248749 23.69175140863559 47.1224103511808 14.403733169934869 16 15.681216311307649 18.142825366492403 46.4370134827049 19.73894483949505 17 16.024334433381785 19.563701851895893 29.047247990278162 35.36471572444416 18 20.32786013762963 23.58645639373434 35.21274209576251 20.872941372873523 19 27.885085739893334 24.319651043553804 25.904345681015794 21.89091753553707 20 31.077138157971433 22.04461654754527 26.717793971510655 20.16045132297264 21 21.51445754647693 28.406617824328933 29.2465997124672 20.83232491672694 22 22.97716291955377 24.203444144911682 24.645841756235047 28.173551179299505 23 18.759486693797154 30.659175705110535 24.79245270700986 25.788884894082447 24 18.598419828664774 23.98590594982119 40.25114120117457 17.16453302033947 25 17.644049689174526 25.175347909558205 36.03990018890616 21.140702212361113 26 17.18174022162316 33.49523957413809 27.60310214595717 21.719918058281586 27 17.20594222017663 35.76542434403957 27.516273395848167 19.51236003993563 28 15.44385952395275 29.512914960519034 36.39155196364944 18.65167355187878 29 15.599936767032682 23.59816102116579 37.04197484577637 23.75992736602515 30 17.182113277477544 31.954332367584993 32.25184441146009 18.611709943477376 31 28.26681514289671 28.27348351629391 24.917006730393933 18.542694610415438 32 29.888349045979602 24.85027636444013 27.012647992423233 18.248726597157034 33 28.774870584592517 27.57750118794974 24.276889516244484 19.370738711213267 34 20.191041903032524 27.381040648632215 27.328206613254398 25.09971083508087 35 19.901364032099593 25.960024267283327 31.207008227280546 22.93160347333653 36 31.339349791624986 24.591468865457873 25.913112493593932 18.156068849323205 37 20.231098775397527 32.88212227745003 28.658337262077797 18.228441685074642 38 20.583869717703973 33.22696578285071 24.66039093455621 21.528773564889104 39 20.075021532317596 33.03973837592932 27.02136817301957 19.863871918733516 40 24.022045735715107 26.355323576990102 25.891801677911968 23.73082900938282 41 17.57661984349374 24.6808623745658 28.21691892237221 29.52559885956825 42 21.390929426692427 25.24095910794884 25.72103536056548 27.647076104793257 43 22.041771996655555 25.83957385829753 26.45301757885818 25.665636566188738 44 19.184956895727627 29.18145483389455 29.331330023395264 22.30225824698256 45 17.14616001951082 37.973588578148906 23.20985650872881 21.670394893611462 46 21.88140461125015 33.214235251819694 25.72103536056548 19.183324776364675 47 21.22165533276349 28.636466862614252 25.9810086590927 24.160869145529553 48 22.326600141481435 25.437839335102552 31.089822057020655 21.14573846639536 49 22.378128481368893 24.182972704902095 31.86419274676829 21.57470606696073 50 19.60287271660672 34.012108460393826 26.68393915272487 19.70107967027458 51 18.295638370846433 33.536881933884246 25.002483153030774 23.16499654223855 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1476.0 1 2134.0 2 2792.0 3 7312.0 4 11832.0 5 9243.0 6 6654.0 7 7112.0 8 7570.0 9 8135.5 10 8701.0 11 8950.0 12 9199.0 13 9059.0 14 8919.0 15 8891.0 16 8863.0 17 8383.0 18 7903.0 19 7631.0 20 7359.0 21 7963.0 22 8567.0 23 8756.5 24 8946.0 25 8874.0 26 12620.5 27 16439.0 28 20968.5 29 25498.0 30 29109.5 31 32721.0 32 39252.5 33 45784.0 34 53563.5 35 61343.0 36 65672.5 37 70002.0 38 82461.0 39 94920.0 40 123371.5 41 151823.0 42 184666.5 43 217510.0 44 223701.5 45 229893.0 46 213406.5 47 196920.0 48 192619.0 49 188318.0 50 170066.0 51 151814.0 52 139591.5 53 127369.0 54 114962.0 55 102555.0 56 91185.5 57 79816.0 58 70859.0 59 61902.0 60 56203.0 61 50504.0 62 46198.0 63 41892.0 64 34426.5 65 26961.0 66 24183.0 67 21405.0 68 17783.5 69 14162.0 70 12971.5 71 11781.0 72 9262.0 73 6743.0 74 5530.0 75 3325.5 76 2334.0 77 1536.5 78 739.0 79 868.0 80 997.0 81 597.5 82 198.0 83 147.5 84 97.0 85 78.5 86 60.0 87 46.5 88 33.0 89 21.0 90 9.0 91 7.5 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2144451.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.439256402135268 #Duplication Level Percentage of deduplicated Percentage of total 1 80.47519356701473 12.42477147492607 2 7.69036957074195 2.3746717525972785 3 2.725836543938795 1.2625466793654394 4 1.2904943381682112 0.7969709188993148 5 0.7547673486860355 0.5826523310161767 6 0.5077173115257647 0.4703266651469441 7 0.34969899979671054 0.37793647650021645 8 0.25327305746332457 0.31282781391432063 9 0.2210133142785902 0.3071053104689572 >10 2.6758623703001883 10.039623619778787 >50 1.205938367331829 13.604448769514239 >100 1.830664357278509 54.86518711134563 >500 0.017649357167903126 1.7257730269236902 >1k 9.128977845467135E-4 0.26657327620300597 >5k 6.085985230311423E-4 0.5885847733999399 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6374 0.29723225198430736 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6154 0.2869732159886143 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 3636 0.1695538858197273 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.021077655772969398 0.0 2 0.0 0.0 0.0 0.08188576003835014 0.0 3 0.0 0.0 0.0 0.12184936843975451 0.0 4 0.0 0.0 0.0 0.2004242577704037 0.0 5 0.0 0.0 0.0 0.33416478156880247 0.0 6 0.0 0.0 0.0 0.4763456940727487 0.0 7 0.0 0.0 0.0 0.557392078438724 0.0 8 0.0 0.0 0.0 0.7502153231759551 0.0 9 0.0 0.0 0.0 0.8129819706768772 0.0 10 4.6631981798604867E-5 0.0 0.0 0.9479349260020397 0.0 11 4.6631981798604867E-5 0.0 0.0 1.098602859193332 0.0 12 4.6631981798604867E-5 0.0 0.0 1.2268408091394953 0.0 13 4.6631981798604867E-5 0.0 0.0 1.2744986945376695 0.0 14 4.6631981798604867E-5 0.0 0.0 1.2916126318577574 0.0 15 4.6631981798604867E-5 0.0 0.0 1.3225762677720312 0.0 16 4.6631981798604867E-5 0.0 0.0 1.4024102206112428 0.0 17 4.6631981798604867E-5 0.0 0.0 1.4994513747341394 0.0 18 4.6631981798604867E-5 0.0 0.0 1.6425649268740576 0.0 19 4.6631981798604867E-5 0.0 0.0 1.7071502216651255 0.0 20 9.326396359720973E-5 0.0 0.0 1.773414267800943 0.0 21 9.326396359720973E-5 0.0 0.0 1.8767507394666514 0.0 22 9.326396359720973E-5 0.0 0.0 1.977335924206242 0.0 23 9.326396359720973E-5 0.0 0.0 2.104221546680246 0.0 24 9.326396359720973E-5 0.0 0.0 2.1960865508234977 0.0 25 9.326396359720973E-5 0.0 0.0 2.272050049173425 0.0 26 9.326396359720973E-5 0.0 0.0 2.34740733175997 0.0 27 9.326396359720973E-5 0.0 0.0 2.4218319747105435 0.0 28 9.326396359720973E-5 0.0 0.0 2.502785095112922 0.0 29 9.326396359720973E-5 0.0 0.0 2.5902666929671043 0.0 30 1.398959453958146E-4 0.0 0.0 2.705028000173471 0.0 31 1.398959453958146E-4 0.0 0.0 2.8114421826378875 0.0 32 1.398959453958146E-4 0.0 0.0 2.905079202089486 0.0 33 1.398959453958146E-4 0.0 0.0 3.004078899447924 0.0 34 1.398959453958146E-4 0.0 0.0 3.1031252287881608 0.0 35 1.398959453958146E-4 0.0 0.0 3.2456791971464956 0.0 36 1.398959453958146E-4 0.0 0.0 3.3491089327758012 0.0 37 1.398959453958146E-4 0.0 0.0 3.457761450366551 0.0 38 1.398959453958146E-4 0.0 0.0 3.5700046305557924 0.0 39 1.398959453958146E-4 0.0 0.0 3.6799628436369027 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTA 25 3.891939E-5 45.000004 45 GTCGACA 50 2.1827873E-11 45.000004 23 GCGCAAA 25 3.891939E-5 45.000004 1 TAGCACG 65 0.0 45.000004 1 TCGCTAG 25 3.891939E-5 45.000004 17 TATTACG 50 2.1827873E-11 45.000004 1 TGTACGA 25 3.891939E-5 45.000004 22 ACTATCG 20 7.034656E-4 45.0 27 GACCGTT 40 6.8193913E-9 45.0 9 TATATCG 20 7.034656E-4 45.0 26 TCGATAG 35 1.2125929E-7 45.0 1 CCCGTTA 20 7.034656E-4 45.0 22 CCGTACA 20 7.034656E-4 45.0 25 AACGATC 35 1.2125929E-7 45.0 23 ACGTAGA 35 1.2125929E-7 45.0 43 CCGTTCG 20 7.034656E-4 45.0 36 CCGTTAT 20 7.034656E-4 45.0 23 CTTACGA 20 7.034656E-4 45.0 27 TTTACGT 30 2.1663855E-6 44.999996 13 CGCTCGT 30 2.1663855E-6 44.999996 18 >>END_MODULE