##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545546_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1746365 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.269834771081648 31.0 31.0 33.0 30.0 34.0 2 31.607501868166164 31.0 31.0 34.0 30.0 34.0 3 31.714562534178135 31.0 31.0 34.0 30.0 34.0 4 35.41963449794287 37.0 35.0 37.0 33.0 37.0 5 35.26226590661173 37.0 35.0 37.0 33.0 37.0 6 35.350640330057004 37.0 35.0 37.0 33.0 37.0 7 35.84025790713854 37.0 35.0 37.0 35.0 37.0 8 35.880315397983814 37.0 35.0 37.0 35.0 37.0 9 37.582999544768704 39.0 37.0 39.0 35.0 39.0 10 36.88180993091364 39.0 37.0 39.0 32.0 39.0 11 36.43802870533938 39.0 35.0 39.0 32.0 39.0 12 35.45547866568558 37.0 35.0 39.0 31.0 39.0 13 34.96798263822282 37.0 34.0 39.0 29.0 39.0 14 35.92805284118727 38.0 35.0 40.0 30.0 41.0 15 36.2669138467617 38.0 35.0 40.0 31.0 41.0 16 36.507150567034955 38.0 35.0 40.0 32.0 41.0 17 36.47319832910073 38.0 35.0 40.0 32.0 41.0 18 36.44786055606932 37.0 35.0 40.0 31.0 41.0 19 36.37737471834353 37.0 35.0 40.0 31.0 41.0 20 36.198352005451326 37.0 35.0 40.0 31.0 41.0 21 36.00514268208536 36.0 34.0 40.0 31.0 41.0 22 35.93195924105213 36.0 34.0 40.0 30.0 41.0 23 35.9339467980634 36.0 34.0 40.0 30.0 41.0 24 35.88036693360208 36.0 34.0 40.0 30.0 41.0 25 35.77126774757854 36.0 34.0 40.0 30.0 41.0 26 35.676933516189344 36.0 34.0 40.0 30.0 41.0 27 35.611444342963814 36.0 34.0 40.0 30.0 41.0 28 35.67120905423551 36.0 34.0 40.0 30.0 41.0 29 35.6805450177941 36.0 34.0 40.0 30.0 41.0 30 35.62544771568372 36.0 34.0 40.0 30.0 41.0 31 35.43000690004667 36.0 34.0 40.0 29.0 41.0 32 35.24861812965789 36.0 34.0 40.0 29.0 41.0 33 35.082955166875195 36.0 34.0 40.0 28.0 41.0 34 34.922953678068446 36.0 34.0 40.0 27.0 41.0 35 34.82551872031333 36.0 34.0 40.0 27.0 41.0 36 34.61516120627704 35.0 33.0 40.0 25.0 41.0 37 34.5590497977227 35.0 33.0 40.0 25.0 41.0 38 34.60351587440197 35.0 33.0 40.0 26.0 41.0 39 34.57926722077 35.0 33.0 40.0 26.0 41.0 40 34.39784466592035 35.0 33.0 40.0 24.0 41.0 41 34.391510365817 35.0 33.0 40.0 24.0 41.0 42 34.31953743919513 35.0 33.0 40.0 24.0 41.0 43 34.25002505203666 35.0 33.0 40.0 24.0 41.0 44 34.20708729274808 35.0 33.0 40.0 24.0 41.0 45 34.152271146066255 35.0 33.0 40.0 24.0 41.0 46 34.14445891895451 35.0 33.0 40.0 24.0 41.0 47 34.12148147723987 35.0 33.0 40.0 24.0 41.0 48 34.14189129992871 35.0 33.0 40.0 24.0 41.0 49 34.115981481534504 35.0 33.0 40.0 24.0 41.0 50 33.98055561122675 35.0 33.0 39.0 24.0 41.0 51 33.81055048629582 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 1.0 14 15.0 15 53.0 16 169.0 17 446.0 18 960.0 19 1873.0 20 3254.0 21 5034.0 22 7725.0 23 11307.0 24 15763.0 25 22586.0 26 29094.0 27 33898.0 28 37699.0 29 43072.0 30 51741.0 31 63190.0 32 79129.0 33 102556.0 34 176514.0 35 287249.0 36 112320.0 37 132586.0 38 189321.0 39 338597.0 40 211.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.558428507213556 23.86912243431356 29.41635912309282 14.156089935380061 2 28.595797556639074 26.85435175349941 31.093557188789283 13.456293501072228 3 27.55523616197072 25.555711434894768 32.97369106687319 13.91536133626132 4 25.31692973691067 28.293455262788708 31.58245842077687 14.807156579523753 5 21.98005571572953 33.08288931580741 30.852714066074387 14.084340902388675 6 19.90420101181597 42.217634915953994 27.356022366458326 10.522141705771702 7 88.33852029787587 4.139169074048095 5.943030237092475 1.5792803909835573 8 89.57657763411429 3.278524248939941 5.510932708797989 1.6339654081477812 9 85.58943863396254 4.775691221480045 7.275168707572586 2.359701436984823 10 51.93593550031065 26.256195010779532 13.068115771903354 8.739753717006469 11 45.04476441064726 19.755778431198518 22.368863324677257 12.830593833476964 12 44.55237020897693 20.289172080292495 23.718752952561463 11.43970475816911 13 19.832795549613053 45.81934475324459 21.580654674137424 12.767205023004927 14 13.482404880995668 45.65139589948264 25.50308784246134 15.363111377060351 15 11.531609944083854 23.613162196906146 49.38784274765012 15.467385111359883 16 12.9417962453439 18.015306078626175 48.67630764473635 20.366590031293573 17 13.071436956191862 19.14908968056506 29.391450240929018 38.38802312231407 18 18.681318052068153 23.209409258660134 38.80042259206981 19.3088500972019 19 27.362893782227655 26.94534075064491 24.39936668451326 21.29239878261417 20 30.628591388398185 21.828426474419725 27.756797691204298 19.78618444597779 21 18.40972534378552 29.604979485960836 29.32416762818769 22.661127542065948 22 21.132752889573485 25.500911894134386 23.51232417049128 29.85401104580085 23 15.681143403584016 33.13287886552926 24.785082156364794 26.400895574521936 24 16.257426139438206 22.81063809684688 45.63965723087671 15.29227853283821 25 14.157521480332003 29.226421738869025 36.8622252507351 19.753831530063877 26 14.952086190458466 35.95817598268403 27.67170665926081 21.418031167596695 27 13.926756434078785 37.671277195775225 27.778728959868072 20.62323741027792 28 12.028585089600398 29.64941464126915 39.205549813469695 19.116450455660758 29 12.547720550973022 22.312689500763014 40.323128326552585 24.816461621711383 30 15.556140898380349 35.703704552026636 31.437815118832546 17.302339430760465 31 27.150796082147778 30.853343945853247 24.347258448262536 17.648601523736446 32 28.138046742805773 25.61692429703985 26.475794006407593 19.769234953746782 33 27.26726657943786 31.19502509498301 22.41123705525477 19.12647127032436 34 16.01852991785795 27.376579351968232 28.286011229038603 28.318879501135214 35 17.86711254520103 25.993134310410483 33.10510689346156 23.034646250926922 36 29.073360952607274 26.984164249741603 24.750266983133535 19.192207814517584 37 15.820346834710957 35.93361067130869 30.01125194332227 18.23479055065808 38 16.896525067783656 34.1089634755621 27.905678366206377 21.088833090447874 39 17.298903722875803 35.2809979586169 27.623148654490898 19.7969496640164 40 24.489897587274136 27.359057241756446 25.450120679239447 22.700924491729964 41 14.855027442716729 24.684186868151848 29.81358421635798 30.647201472773446 42 19.03370715743845 25.73614336063767 24.835701585865497 30.394447896058384 43 19.203946483123516 26.19171822614402 27.3638099709969 27.240525319735564 44 17.544385051234993 30.01818062088968 29.487478276305357 22.949956051569977 45 14.315850352016904 42.31280402435917 21.052586372264674 22.318759251359253 46 19.05804342162148 37.75424954118984 25.159746101187324 18.027960936001353 47 17.41915349883902 30.47993976058842 28.333710306837347 23.767196433735215 48 18.995456276322535 25.037778471281776 34.11904155202377 21.847723700371915 49 18.887002430763328 25.392458048575183 33.73097834645106 21.989561174210433 50 17.04437503042033 35.926796517337436 28.27576136718269 18.753067085059538 51 15.401763090762813 35.132289069009055 25.331245186430102 24.134702653798033 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1409.0 1 1886.0 2 2363.0 3 6736.5 4 11110.0 5 8196.5 6 5283.0 7 5701.0 8 6119.0 9 6754.0 10 7389.0 11 7674.5 12 7960.0 13 7876.5 14 7793.0 15 7470.5 16 7148.0 17 7006.5 18 6865.0 19 6555.5 20 6246.0 21 6035.0 22 5824.0 23 5504.0 24 5184.0 25 7222.5 26 11023.0 27 12785.0 28 18477.5 29 24170.0 30 27869.5 31 31569.0 32 38737.0 33 45905.0 34 58932.5 35 71960.0 36 76308.0 37 80656.0 38 88260.0 39 95864.0 40 123337.5 41 150811.0 42 177827.5 43 204844.0 44 198277.5 45 191711.0 46 181405.5 47 171100.0 48 155795.5 49 140491.0 50 131147.5 51 121804.0 52 108034.0 53 94264.0 54 80175.0 55 66086.0 56 55679.0 57 45272.0 58 38145.0 59 31018.0 60 28201.0 61 25384.0 62 21628.5 63 17873.0 64 14418.5 65 10964.0 66 9367.0 67 7770.0 68 6179.0 69 4588.0 70 4168.5 71 3749.0 72 3066.5 73 2384.0 74 2029.0 75 1196.0 76 718.0 77 621.0 78 524.0 79 392.5 80 261.0 81 179.5 82 98.0 83 87.0 84 76.0 85 43.5 86 11.0 87 7.5 88 4.0 89 4.0 90 4.0 91 5.5 92 7.0 93 6.5 94 6.0 95 6.0 96 6.0 97 3.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1746365.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.173129962026334 #Duplication Level Percentage of deduplicated Percentage of total 1 75.39404486852813 14.455398206271344 2 8.832996078048657 3.3871236351699157 3 3.8892347279766613 2.2370640867696796 4 2.277556147532396 1.746715200498026 5 1.5321402417756922 1.4687961987807898 6 1.1236376919180424 1.292619089842556 7 0.8207236208726614 1.1015088452127455 8 0.6171809998651906 0.9466633216406926 9 0.50533137059648 0.8719905638101685 >10 3.096818448639064 11.632985105249565 >50 0.6401918800297257 8.965680743459783 >100 1.2553888146188437 49.038111491474716 >500 0.012948361484379549 1.52836164358014 >1k 9.03374057049736E-4 0.20784609840165097 >5k 9.03374057049736E-4 1.1191357698382227 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6990 0.40025996856327284 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 6437 0.3685941942262929 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 5957 0.3411085311489866 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04002599685632729 0.0 2 0.0 0.0 0.0 0.1374855771846092 0.0 3 0.0 0.0 0.0 0.19451832807001973 0.0 4 0.0 0.0 0.0 0.3079539500619859 0.0 5 0.0 0.0 0.0 0.5264649715265709 0.0 6 0.0 0.0 0.0 0.7310613760582696 0.0 7 0.0 0.0 0.0 0.8616755374735522 0.0 8 0.0 0.0 0.0 1.1793639932087507 0.0 9 0.0 0.0 0.0 1.2817480881717167 0.0 10 0.0 0.0 0.0 1.4577135936645547 0.0 11 0.0 0.0 0.0 1.688707687110083 0.0 12 5.726179807772144E-5 0.0 0.0 1.8820807792185483 0.0 13 5.726179807772144E-5 0.0 0.0 1.9631634852966018 0.0 14 5.726179807772144E-5 0.0 0.0 1.9862972517200013 0.0 15 5.726179807772144E-5 0.0 0.0 2.0303888362398466 0.0 16 5.726179807772144E-5 0.0 0.0 2.131513171645103 0.0 17 5.726179807772144E-5 0.0 0.0 2.2706020791758883 0.0 18 5.726179807772144E-5 0.0 0.0 2.462028270149711 0.0 19 5.726179807772144E-5 0.0 0.0 2.558228090920283 0.0 20 5.726179807772144E-5 0.0 0.0 2.650705894815803 0.0 21 5.726179807772144E-5 0.0 0.0 2.781892674211863 0.0 22 5.726179807772144E-5 0.0 0.0 2.9404505930890736 0.0 23 5.726179807772144E-5 0.0 0.0 3.127410363812834 0.0 24 5.726179807772144E-5 0.0 0.0 3.2615174949108576 0.0 25 5.726179807772144E-5 0.0 0.0 3.371231100027772 0.0 26 5.726179807772144E-5 0.0 0.0 3.4745313837599814 0.0 27 5.726179807772144E-5 3.4357078846632865E-4 0.0 3.582527134934564 0.0 28 1.7178539423316433E-4 3.4357078846632865E-4 0.0 3.6985967996381053 0.0 29 1.7178539423316433E-4 3.4357078846632865E-4 0.0 3.8229121632648386 0.0 30 1.7178539423316433E-4 3.4357078846632865E-4 0.0 3.9964726732384124 0.0 31 2.2904719231088577E-4 3.4357078846632865E-4 0.0 4.140428833605804 0.0 32 2.2904719231088577E-4 3.4357078846632865E-4 0.0 4.267320978146035 0.0 33 2.2904719231088577E-4 3.4357078846632865E-4 0.0 4.395930976628597 0.0 34 3.4357078846632865E-4 3.4357078846632865E-4 0.0 4.538684639236356 0.0 35 3.4357078846632865E-4 3.4357078846632865E-4 0.0 4.75673756631632 0.0 36 3.4357078846632865E-4 3.4357078846632865E-4 0.0 4.9076796660491935 0.0 37 3.4357078846632865E-4 3.4357078846632865E-4 0.0 5.057247482628202 0.0 38 3.4357078846632865E-4 3.4357078846632865E-4 0.0 5.206242681226433 0.0 39 3.4357078846632865E-4 3.4357078846632865E-4 0.0 5.361078583228592 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATA 20 7.0342934E-4 45.000004 19 TACGAAC 30 2.1661508E-6 45.000004 26 CGAGAAT 20 7.0342934E-4 45.000004 35 TCGACGA 30 2.1661508E-6 45.000004 28 ACGGTAC 30 2.1661508E-6 45.000004 5 CTTAACG 50 2.1827873E-11 45.0 1 ACCGGGT 25 3.891641E-5 45.0 4 TCACCGT 25 3.891641E-5 45.0 39 GGCCGTA 45 3.8562575E-10 45.0 8 TAACGCG 45 3.8562575E-10 45.0 1 TCGTGAC 35 1.212411E-7 45.0 12 CTACGTC 25 3.891641E-5 45.0 45 TATAGCG 145 0.0 45.0 1 ACGTAAG 75 0.0 45.0 1 CCAACGT 25 3.891641E-5 45.0 22 GCTAACG 25 3.891641E-5 45.0 1 CGTAAGG 230 0.0 44.02174 2 CGACGGT 580 0.0 43.836205 28 CGGTCTA 555 0.0 43.783783 31 ACGGGTA 150 0.0 43.5 5 >>END_MODULE