##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545545_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1570211 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.387701398092357 31.0 31.0 33.0 30.0 34.0 2 31.741968436089163 31.0 31.0 34.0 30.0 34.0 3 31.842922384316502 31.0 31.0 34.0 30.0 34.0 4 35.54946564506299 37.0 35.0 37.0 33.0 37.0 5 35.41487672675838 37.0 35.0 37.0 33.0 37.0 6 35.49371772328687 37.0 35.0 37.0 33.0 37.0 7 35.89166487815969 37.0 35.0 37.0 35.0 37.0 8 35.914796801194235 37.0 35.0 37.0 35.0 37.0 9 37.58812923868194 39.0 37.0 39.0 35.0 39.0 10 36.99250291839759 39.0 37.0 39.0 33.0 39.0 11 36.62857348471002 39.0 35.0 39.0 32.0 39.0 12 35.92705120522019 37.0 35.0 39.0 32.0 39.0 13 35.63110053362255 37.0 35.0 39.0 31.0 39.0 14 36.64405739101306 38.0 35.0 41.0 31.0 41.0 15 36.8429058260323 38.0 35.0 41.0 31.0 41.0 16 36.9875042271389 38.0 35.0 41.0 32.0 41.0 17 36.920671807801625 38.0 35.0 41.0 32.0 41.0 18 36.832036586165806 38.0 35.0 40.0 32.0 41.0 19 36.78564154753724 38.0 35.0 40.0 31.0 41.0 20 36.65156784661424 38.0 35.0 40.0 31.0 41.0 21 36.47535522296048 38.0 35.0 40.0 31.0 41.0 22 36.39366174354912 38.0 35.0 40.0 31.0 41.0 23 36.339358850498435 38.0 35.0 40.0 31.0 41.0 24 36.25380092229643 38.0 35.0 40.0 31.0 41.0 25 36.13177337313265 37.0 35.0 40.0 30.0 41.0 26 36.06179296922515 37.0 35.0 40.0 30.0 41.0 27 36.014181533564596 37.0 35.0 40.0 30.0 41.0 28 35.95960861310996 37.0 35.0 40.0 30.0 41.0 29 35.93141749739366 37.0 35.0 40.0 30.0 41.0 30 35.8519084377832 37.0 35.0 40.0 30.0 41.0 31 35.688563511528066 37.0 34.0 40.0 30.0 41.0 32 35.50183765111822 37.0 34.0 40.0 29.0 41.0 33 35.3497052306983 37.0 34.0 40.0 28.0 41.0 34 35.17227621001254 37.0 34.0 40.0 27.0 41.0 35 35.02922537162203 37.0 34.0 40.0 27.0 41.0 36 34.853634320483046 37.0 34.0 40.0 26.0 41.0 37 34.7717217622345 37.0 34.0 40.0 25.0 41.0 38 34.738958012649256 36.0 33.0 40.0 26.0 41.0 39 34.65836438542336 36.0 33.0 40.0 25.0 41.0 40 34.48216959376797 36.0 33.0 40.0 24.0 41.0 41 34.42353097768389 36.0 33.0 40.0 24.0 41.0 42 34.361238712504246 36.0 33.0 40.0 24.0 41.0 43 34.2919352876779 36.0 33.0 40.0 24.0 41.0 44 34.23320432731652 35.0 33.0 40.0 24.0 41.0 45 34.16184958581999 35.0 33.0 40.0 23.0 41.0 46 34.13578684648114 35.0 33.0 40.0 23.0 41.0 47 34.094787897932186 35.0 33.0 40.0 23.0 41.0 48 34.04271527839252 35.0 33.0 40.0 23.0 41.0 49 33.97747691233853 35.0 33.0 39.0 24.0 41.0 50 33.8547220723839 35.0 33.0 39.0 24.0 41.0 51 33.692192323197325 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 7.0 14 19.0 15 43.0 16 143.0 17 427.0 18 889.0 19 1672.0 20 2936.0 21 4481.0 22 6663.0 23 9464.0 24 13512.0 25 19223.0 26 25063.0 27 29971.0 28 32984.0 29 37244.0 30 44005.0 31 53378.0 32 65952.0 33 85786.0 34 143788.0 35 216975.0 36 114828.0 37 141323.0 38 198300.0 39 320952.0 40 179.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.375450815208914 23.522316427537447 28.06374429933302 15.038488457920623 2 32.0823125044978 25.295581294488446 29.3481576679822 13.273948533031549 3 29.108253604133456 25.406267055828803 31.50512892853253 13.980350411505205 4 26.522168039836686 27.64978719420511 30.265996098613495 15.562048667344708 5 23.542313740000548 32.12530035772262 29.754281430966923 14.578104471309908 6 22.159760694581813 41.37150994356809 26.184442727760793 10.284286634089304 7 86.354636415106 4.474494192181815 7.2332317121711664 1.937637680541023 8 87.34768766745361 3.3983967759746934 7.316341561739155 1.9375739948325417 9 82.77556328417009 5.3056563735701765 9.039358404698476 2.8794219375612577 10 48.61824302593728 23.76636006243747 15.23292092591378 12.382475985711475 11 40.78948625375825 22.417560442513775 21.844643809016752 14.948309494711221 12 38.1897719478465 20.99157374391085 26.07324748075259 14.745406827490063 13 22.129255240219308 35.28576732681149 25.98294114612622 16.602036286842978 14 16.95332665482537 37.48005841253182 28.707797869203567 16.858817063439243 15 16.12369293044056 23.716430466988196 43.96402776442147 16.195848838149775 16 17.493254091329128 18.991141954807347 42.75106976068822 20.76453419317531 17 17.810727348107992 19.464708883073676 30.103279113443985 32.621284655374346 18 21.627348171678836 22.82750534800737 33.92537690794422 21.619769572369574 19 27.514709806516446 24.53167122125625 26.22832218090435 21.725296791322947 20 29.34669289668713 22.268663256084693 27.170552237883953 21.214091609344223 21 22.80343215020147 26.178774699705965 29.02527112598243 21.992522024110137 22 23.16720491704618 23.437487063840464 27.039295992704165 26.356012026409186 23 21.182312440812094 28.111126466443043 26.415303421005206 24.291257671739658 24 20.554243983770334 23.2864882490315 37.228499864031015 18.930767903167155 25 19.71881485991373 24.63719844020963 33.79437540559835 21.849611294278283 26 19.46763842566381 31.042388570708013 27.03426482173415 22.45570818189403 27 19.85102639072074 31.919213405077407 27.965222508312575 20.264537695889278 28 17.65737216208522 27.93815608220806 35.05554349065189 19.348928265054823 29 18.484012658171416 24.841183764474966 34.99434152480144 21.680462052552173 30 20.63518851924996 28.522599828940187 30.78579885123719 20.056412800572662 31 27.34619742187515 26.75672250417301 25.089175913300828 20.80790416065102 32 27.628006681904534 25.617894665111884 27.522352091534195 19.231746561449384 33 26.784298415945372 26.762581589353278 25.941927549864317 20.511192444837032 34 20.223969899586745 27.72697427288435 28.348037301993173 23.70101852553574 35 21.93775231481629 24.796540082829633 30.52137578962318 22.7443318127309 36 28.629082333520785 25.955619977187776 25.783159078620642 19.632138610670797 37 21.64632651280624 31.64466431581488 27.88701645829764 18.821992713081233 38 21.76185238799117 30.678170003903933 25.15961230688105 22.40036530122385 39 22.342984477882272 29.62283412866169 26.5909486049964 21.44323278845964 40 24.201078708530254 26.04624474035655 26.802257785737076 22.950418765376117 41 19.01171243864678 25.089685398968676 28.90012870881684 26.998473453567705 42 22.465006295332284 26.670364683472474 25.033705661213684 25.830923359981554 43 22.16549240834512 26.587636948155374 27.063878676177914 24.18299196732159 44 20.83497058675554 28.82580748701926 28.3275941895707 22.0116277366545 45 19.27454335754876 33.64146601953495 24.573640103145372 22.51035051977091 46 21.97558162565413 31.054106741068555 27.004650967290385 19.965660665986928 47 22.538244860085683 28.21493417126743 27.270029314531612 21.976791654115274 48 23.068046268940925 25.01580997713046 30.117990512103148 21.79815324182546 49 21.13486658799359 25.757748480936637 30.685302803253826 22.422082127815944 50 20.47087939136842 31.562891866125 27.07413207524339 20.89209666726319 51 20.16397796219744 31.64937705824249 25.41760311193846 22.769041867621613 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1293.0 1 2748.0 2 4203.0 3 8812.5 4 13422.0 5 10121.5 6 6821.0 7 7079.0 8 7337.0 9 7621.0 10 7905.0 11 7916.0 12 7927.0 13 7707.0 14 7487.0 15 7525.0 16 7563.0 17 7334.5 18 7106.0 19 7410.5 20 7715.0 21 7123.0 22 6531.0 23 6575.5 24 6620.0 25 8571.0 26 12461.5 27 14401.0 28 18045.5 29 21690.0 30 22887.5 31 24085.0 32 27892.0 33 31699.0 34 38659.0 35 45619.0 36 46329.0 37 47039.0 38 53873.5 39 60708.0 40 78492.5 41 96277.0 42 114065.5 43 131854.0 44 135596.5 45 139339.0 46 133612.5 47 127886.0 48 122114.0 49 116342.0 50 110016.0 51 103690.0 52 97283.5 53 90877.0 54 80788.0 55 70699.0 56 67224.0 57 63749.0 58 62405.5 59 61062.0 60 59103.0 61 57144.0 62 52050.0 63 46956.0 64 42035.0 65 37114.0 66 30711.0 67 24308.0 68 20975.5 69 17643.0 70 15601.5 71 13560.0 72 11901.0 73 10242.0 74 8042.0 75 4625.0 76 3408.0 77 2840.0 78 2272.0 79 1794.5 80 1317.0 81 927.0 82 537.0 83 425.0 84 313.0 85 190.5 86 68.0 87 39.0 88 10.0 89 7.5 90 5.0 91 3.0 92 1.0 93 2.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1570211.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.232932382030775 #Duplication Level Percentage of deduplicated Percentage of total 1 80.23017087581354 13.023709388258562 2 6.44672727150461 2.0929857576745614 3 2.205411571240569 1.0740089073148922 4 1.1252883808166414 0.7306692078432575 5 0.71299911693293 0.5787033226809954 6 0.4837848065342052 0.4711947631154156 7 0.3990730543376969 0.4534688134588029 8 0.31790652423432864 0.4128444089361828 9 0.26409949938948385 0.3858398384145903 >10 4.195195877013585 17.410061531654005 >50 2.0733309540000664 24.28789275375263 >100 1.5381121598114462 37.53623060233397 >500 0.006319926696708561 0.66004447777023 >1k 0.0011849862556328552 0.44761710698600893 >5k 3.9499541854428504E-4 0.43472911980592177 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6780 0.43178910350265026 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3862 0.24595420615445948 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1963 0.1250150457486287 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010953941858769299 0.0 2 0.0 0.0 0.0 0.03509082537315049 0.0 3 0.0 0.0 0.0 0.05018433828319888 0.0 4 0.0 0.0 0.0 0.08018030697785201 0.0 5 0.0 0.0 0.0 0.13202047368156253 0.0 6 0.0 0.0 0.0 0.1908660683182069 0.0 7 0.0 0.0 0.0 0.22831326490516243 0.0 8 0.0 0.0 0.0 0.3367700264486747 0.0 9 0.0 0.0 0.0 0.38447062210110616 0.0 10 0.0 0.0 0.0 0.47407641393417826 0.0 11 0.0 0.0 0.0 0.5938055458788659 0.0 12 0.0 0.0 0.0 0.6925183940247521 0.0 13 0.0 0.0 0.0 0.7306024476965197 0.0 14 0.0 0.0 0.0 0.7426390465994698 0.0 15 0.0 0.0 0.0 0.7636553303982713 0.0 16 0.0 0.0 0.0 0.81434915434932 0.0 17 0.0 0.0 0.0 0.8730036918605206 0.0 18 0.0 0.0 0.0 0.9536934845062224 6.368570848121686E-5 19 0.0 0.0 0.0 0.992923880930652 6.368570848121686E-5 20 0.0 0.0 0.0 1.0363575341148419 6.368570848121686E-5 21 0.0 0.0 0.0 1.0949483859175615 6.368570848121686E-5 22 0.0 0.0 0.0 1.1553861232662361 6.368570848121686E-5 23 0.0 0.0 0.0 1.2263320025143118 6.368570848121686E-5 24 0.0 0.0 0.0 1.2812290832251207 6.368570848121686E-5 25 6.368570848121686E-5 0.0 0.0 1.3269554219146344 6.368570848121686E-5 26 6.368570848121686E-5 0.0 0.0 1.367650589634132 6.368570848121686E-5 27 1.2737141696243372E-4 0.0 0.0 1.411402671360728 6.368570848121686E-5 28 1.2737141696243372E-4 0.0 0.0 1.45808429567746 6.368570848121686E-5 29 1.2737141696243372E-4 0.0 0.0 1.509223919587877 6.368570848121686E-5 30 1.2737141696243372E-4 0.0 0.0 1.5755207421168238 6.368570848121686E-5 31 1.2737141696243372E-4 0.0 0.0 1.6397796219743717 6.368570848121686E-5 32 1.9105712544365057E-4 0.0 0.0 1.702446359119889 6.368570848121686E-5 33 2.5474283392486744E-4 0.0 0.0 1.7635846392618573 6.368570848121686E-5 34 3.184285424060843E-4 0.0 0.0 1.8292446047059918 6.368570848121686E-5 35 3.184285424060843E-4 0.0 0.0 1.9156024254065218 6.368570848121686E-5 36 3.184285424060843E-4 0.0 0.0 1.9859114475697852 6.368570848121686E-5 37 3.184285424060843E-4 0.0 0.0 2.054500955604056 6.368570848121686E-5 38 3.184285424060843E-4 0.0 0.0 2.124427863516432 6.368570848121686E-5 39 3.184285424060843E-4 0.0 0.0 2.202060742155035 6.368570848121686E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGTAT 20 7.034077E-4 45.0 43 CGACCGT 20 7.034077E-4 45.0 16 CCTACGG 20 7.034077E-4 45.0 26 CACGATT 25 3.8914608E-5 45.0 26 CGACACT 20 7.034077E-4 45.0 41 GCGATCG 25 3.8914608E-5 45.0 9 CGTACGT 20 7.034077E-4 45.0 20 TTACGTC 20 7.034077E-4 45.0 33 CGTCGAT 20 7.034077E-4 45.0 41 CCGGTAT 25 3.8914608E-5 45.0 42 TATCGTG 20 7.034077E-4 45.0 25 AATCGTC 20 7.034077E-4 45.0 42 TAGTACG 50 2.1827873E-11 45.0 1 TACCGGT 25 3.8914608E-5 45.0 40 CGTAAGG 170 0.0 43.676468 2 CGGTCTA 185 0.0 42.567566 31 ACTACGG 80 0.0 42.1875 2 TGCGAAG 155 0.0 42.09677 1 GGCGATA 435 0.0 41.37931 8 TTACGGG 425 0.0 41.294117 3 >>END_MODULE