##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545543_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1348369 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.319984366297355 31.0 31.0 33.0 30.0 34.0 2 31.656886208448874 31.0 31.0 34.0 30.0 34.0 3 31.755215375019745 31.0 31.0 34.0 30.0 34.0 4 35.459337911209765 37.0 35.0 37.0 33.0 37.0 5 35.31357143333909 37.0 35.0 37.0 33.0 37.0 6 35.394303784794815 37.0 35.0 37.0 33.0 37.0 7 35.85737435375628 37.0 35.0 37.0 35.0 37.0 8 35.88926992536909 37.0 35.0 37.0 35.0 37.0 9 37.60567841592324 39.0 37.0 39.0 35.0 39.0 10 36.967752892568726 39.0 37.0 39.0 32.0 39.0 11 36.531111290752015 39.0 35.0 39.0 32.0 39.0 12 35.43364835590258 37.0 35.0 39.0 31.0 39.0 13 34.955036047254126 37.0 34.0 39.0 29.0 39.0 14 35.8635633124167 38.0 35.0 40.0 30.0 41.0 15 36.21785060321025 38.0 35.0 40.0 31.0 41.0 16 36.44822448454392 37.0 35.0 40.0 32.0 41.0 17 36.413703518843874 37.0 35.0 40.0 31.0 41.0 18 36.370624065074175 37.0 35.0 40.0 31.0 41.0 19 36.318945333213684 37.0 35.0 40.0 31.0 41.0 20 36.15321770227586 36.0 35.0 40.0 31.0 41.0 21 35.94172515090454 36.0 34.0 40.0 31.0 41.0 22 35.84263432339367 36.0 34.0 40.0 30.0 41.0 23 35.844422409592624 36.0 34.0 40.0 30.0 41.0 24 35.78784294210264 36.0 34.0 40.0 30.0 41.0 25 35.66196419526109 35.0 34.0 40.0 30.0 41.0 26 35.53823693662491 35.0 34.0 40.0 30.0 41.0 27 35.47427818349428 35.0 34.0 40.0 30.0 41.0 28 35.51201191958581 36.0 34.0 40.0 30.0 41.0 29 35.56781711831108 36.0 34.0 40.0 30.0 41.0 30 35.497221457924354 36.0 34.0 40.0 30.0 41.0 31 35.28951051233008 36.0 34.0 40.0 29.0 41.0 32 35.09574604577827 35.0 34.0 40.0 29.0 41.0 33 34.91857792636882 35.0 34.0 40.0 28.0 41.0 34 34.780818158827444 35.0 34.0 40.0 27.0 41.0 35 34.60826450326283 35.0 33.0 40.0 27.0 41.0 36 34.43122839519449 35.0 33.0 40.0 25.0 41.0 37 34.34629096337872 35.0 33.0 40.0 25.0 41.0 38 34.376187082319454 35.0 33.0 40.0 26.0 41.0 39 34.34715200364292 35.0 33.0 40.0 25.0 41.0 40 34.15751919541312 35.0 33.0 40.0 24.0 41.0 41 34.178611344520675 35.0 33.0 40.0 24.0 41.0 42 34.10653389391183 35.0 33.0 40.0 24.0 41.0 43 34.01159919873566 35.0 33.0 39.0 24.0 41.0 44 33.95012418707342 35.0 33.0 39.0 24.0 41.0 45 33.927814270425976 35.0 33.0 39.0 24.0 41.0 46 33.92238400615855 35.0 33.0 39.0 24.0 41.0 47 33.87537313598874 35.0 33.0 39.0 24.0 41.0 48 33.847671520184754 35.0 33.0 39.0 24.0 41.0 49 33.824330728457866 35.0 33.0 39.0 24.0 41.0 50 33.66175505369821 35.0 33.0 39.0 24.0 41.0 51 33.49495946584355 35.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 4.0 13 3.0 14 8.0 15 30.0 16 111.0 17 316.0 18 684.0 19 1479.0 20 2505.0 21 3847.0 22 6069.0 23 8636.0 24 12265.0 25 16964.0 26 22583.0 27 26575.0 28 30130.0 29 34674.0 30 41134.0 31 49956.0 32 62840.0 33 81569.0 34 143591.0 35 228154.0 36 89400.0 37 105548.0 38 146988.0 39 232189.0 40 116.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.51456463327175 23.18868202991911 28.910483702903285 14.386269633905851 2 30.558548883873776 25.377919545762325 30.35608205172323 13.707449518640669 3 28.336234369078493 25.486865984014763 31.638668643375812 14.538231003530932 4 25.511414160367078 28.341129171614003 31.02689249011213 15.12056417790679 5 22.841744359296307 33.094501579315455 30.085236311425135 13.978517749963103 6 20.406209279507316 42.28115597436607 26.36674382160966 10.945890924516952 7 87.88647617974011 4.320701529032482 6.064289523120155 1.7285327681072467 8 89.41083635117687 3.044715504435359 6.012819932822543 1.5316282115652318 9 86.04291555204844 4.345843014783045 7.180230337541133 2.4310110956273836 10 56.69731356920843 20.939446101178536 12.013180368281978 10.350059961331059 11 49.40695017461837 18.35128217869144 19.224707776580445 13.01705987010974 12 42.9658350199389 19.60309084531015 24.57665520343467 12.85441893131628 13 20.5513475910526 42.46745512541448 23.304525689926127 13.676671593606796 14 14.387233761677997 44.39556234235584 27.76272667200151 13.454477223964656 15 13.576328141628888 21.4842524561155 50.79173431011837 14.147685092137241 16 15.3943764651961 16.19467667975161 49.22747408164976 19.18347277340253 17 15.38540266054767 16.704329452842657 28.42382166899417 39.48644621761551 18 20.783999038838775 22.134000410866758 36.26077134671592 20.821229203578547 19 29.664431620721032 22.726568172362313 25.40936494386922 22.19963526304743 20 32.24940650519257 22.065547339044432 24.70236263218748 20.98268352357552 21 21.711860774016607 27.80937562343839 28.687844351212465 21.790919251332536 22 22.73472617658816 23.779395699545155 25.08801374104566 28.397864382821027 23 18.780022382597046 30.675727490026837 24.34912104920834 26.195129078167774 24 19.89321914105115 22.15595285860176 40.430030651846785 17.5207973485003 25 17.115492865825306 23.600809570673903 37.529563494859346 21.75413406864145 26 17.23089154378364 34.29484065563655 26.865049552459304 21.609218248120506 27 17.41859980465288 35.115610044431456 27.64183988210942 19.82395026880624 28 14.497960128125165 27.963932721680784 38.41544859011146 19.122658560082588 29 14.922843820942191 24.41260515482038 37.749013808534606 22.915537215702823 30 17.866029254603156 31.159645467969078 31.276527419423022 19.697797858004744 31 30.607645236578414 25.779219189999175 24.110388180090165 19.50274739333224 32 32.2598635833366 24.452727702876587 26.22627782157555 17.061130892211256 33 30.24891554166552 25.492428259623296 24.309665974225155 19.948990224486028 34 20.473030750484476 27.021905724619895 27.243803439562907 25.261260085332726 35 20.312911376633547 24.706738288999524 32.19215214826209 22.78819818610484 36 33.41985762057716 22.615322660191683 25.494949824565825 18.469869894665333 37 21.123223687284415 32.80630153911874 28.44822151799693 17.62225325559991 38 21.416096038992293 33.517976162311655 22.557845812236856 22.508081986459196 39 20.86743317296675 31.104541857607227 26.634103869193076 21.393921100232948 40 25.11916248445344 25.30256925218542 24.415497538136815 25.162770725224327 41 17.242461077049384 23.32981550302625 27.70265409542937 31.725069324495003 42 21.744937772968676 24.096297081881886 25.20237412755707 28.956391017592363 43 22.34959421345344 24.268801789421147 26.715758075126317 26.6658459219991 44 19.42116735107378 29.054138740952958 30.106002140363653 21.41869176760961 45 17.192993905970845 37.73240114538379 22.29159821977515 22.783006728870212 46 22.60738714699018 32.80830395833782 25.165292290166864 19.419016604505146 47 21.547365743353637 27.456801513532277 26.346645465744167 24.64918727736992 48 23.351619623411693 23.611192485143164 31.516817725711583 21.520370165733564 49 21.744641118269552 23.236888418526384 32.8019258823067 22.216544580897367 50 20.11541351069329 33.82204722891137 26.383578975784815 19.67896028461052 51 18.427967418414397 33.5946614020346 24.369367732423395 23.608003447127604 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1022.0 1 1559.5 2 2097.0 3 5265.0 4 8433.0 5 6286.5 6 4140.0 7 4588.0 8 5036.0 9 5329.0 10 5622.0 11 5770.0 12 5918.0 13 5744.5 14 5571.0 15 5430.5 16 5290.0 17 5258.0 18 5226.0 19 5165.5 20 5105.0 21 4402.5 22 3700.0 23 4125.5 24 4551.0 25 4783.5 26 7117.0 27 9218.0 28 9616.5 29 10015.0 30 12893.5 31 15772.0 32 18226.5 33 20681.0 34 25261.0 35 29841.0 36 33748.5 37 37656.0 38 44328.5 39 51001.0 40 73555.0 41 96109.0 42 116633.5 43 137158.0 44 140317.5 45 143477.0 46 136542.5 47 129608.0 48 120219.0 49 110830.0 50 105383.5 51 99937.0 52 92741.5 53 85546.0 54 77705.5 55 69865.0 56 63307.0 57 56749.0 58 51252.5 59 45756.0 60 42660.5 61 39565.0 62 33385.0 63 27205.0 64 24859.0 65 22513.0 66 19521.0 67 16529.0 68 13703.0 69 10877.0 70 8507.5 71 6138.0 72 5258.5 73 4379.0 74 3759.5 75 2092.5 76 1045.0 77 800.0 78 555.0 79 403.0 80 251.0 81 196.5 82 142.0 83 93.5 84 45.0 85 32.5 86 20.0 87 13.0 88 6.0 89 4.5 90 3.0 91 3.5 92 4.0 93 4.0 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1348369.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.664918417844277 #Duplication Level Percentage of deduplicated Percentage of total 1 80.49540061579307 12.609538836580903 2 7.534107671426756 2.3604236404830967 3 2.494678307402359 1.1723679649267138 4 1.2109765646638553 0.7587939636552247 5 0.6707460038011928 0.5253590714320375 6 0.4544758222899097 0.42715960074324766 7 0.3342763363829385 0.3665488076918222 8 0.22973324853140614 0.28790020768886565 9 0.20879122176445555 0.29436277097720054 >10 2.9639335400320155 11.742303794877424 >50 1.5633697027916955 17.960148497992034 >100 1.8261569835223819 49.532899720112574 >500 0.011923197855330256 1.1132592036027167 >1k 9.538558284264203E-4 0.42121705858077413 >5k 4.7692791421321016E-4 0.4277168606553622 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5725 0.42458703811790394 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4567 0.3387055027221777 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03648852799196659 0.0 2 0.0 0.0 0.0 0.11280294934101867 0.0 3 0.0 0.0 0.0 0.1569303358353685 0.0 4 0.0 0.0 0.0 0.246742545994457 0.0 5 0.0 0.0 0.0 0.400409680139487 0.0 6 0.0 0.0 0.0 0.5488111933751073 0.0 7 0.0 0.0 0.0 0.6352860381690769 0.0 8 0.0 0.0 0.0 0.8668250308335478 0.0 9 0.0 0.0 0.0 0.9437327615808432 0.0 10 0.0 0.0 0.0 1.1112685029098117 0.0 11 0.0 0.0 0.0 1.2575934332515804 0.0 12 0.0 0.0 0.0 1.4075523836575894 0.0 13 0.0 0.0 0.0 1.4582803372073965 0.0 14 0.0 0.0 0.0 1.475337982406893 0.0 15 7.41636747804199E-5 0.0 0.0 1.5071541988876933 0.0 16 7.41636747804199E-5 0.0 0.0 1.5793896181238223 0.0 17 7.41636747804199E-5 0.0 0.0 1.6678668821368632 0.0 18 7.41636747804199E-5 0.0 0.0 1.8044763710823966 0.0 19 1.483273495608398E-4 0.0 0.0 1.861804891687661 0.0 20 1.483273495608398E-4 0.0 0.0 1.926772270795309 0.0 21 1.483273495608398E-4 0.0 0.0 2.011541351069329 0.0 22 1.483273495608398E-4 0.0 0.0 2.1008344155049543 0.0 23 2.224910243412597E-4 0.0 0.0 2.2111899635782195 0.0 24 2.224910243412597E-4 0.0 0.0 2.2912125686662925 0.0 25 2.224910243412597E-4 0.0 0.0 2.351878454636676 0.0 26 2.224910243412597E-4 0.0 0.0 2.42151814525549 0.0 27 2.224910243412597E-4 0.0 0.0 2.480774921405046 0.0 28 2.224910243412597E-4 0.0 0.0 2.5483380291300084 0.0 29 2.224910243412597E-4 0.0 0.0 2.621982558186965 0.0 30 2.966546991216796E-4 0.0 0.0 2.7290749045698917 0.0 31 3.708183739020995E-4 0.0 0.0 2.8264518095565827 0.0 32 3.708183739020995E-4 0.0 0.0 2.900467156987442 0.0 33 3.708183739020995E-4 0.0 0.0 2.984420436838877 0.0 34 3.708183739020995E-4 0.0 0.0 3.077495848688304 0.0 35 3.708183739020995E-4 0.0 0.0 3.2063181517818937 0.0 36 3.708183739020995E-4 0.0 0.0 3.3069582584589234 0.0 37 3.708183739020995E-4 0.0 0.0 3.4019619258526412 0.0 38 3.708183739020995E-4 0.0 0.0 3.4957789744498724 0.0 39 3.708183739020995E-4 0.0 0.0 3.603983775954505 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTA 35 1.2121382E-7 45.000004 41 CTCCGAT 25 3.8911654E-5 45.000004 20 CCGATCA 35 1.2121382E-7 45.000004 11 TGCGGAT 25 3.8911654E-5 45.000004 44 ACGGGTA 65 0.0 45.000004 5 TTATCCG 50 2.1827873E-11 45.000004 1 ACCTCGT 25 3.8911654E-5 45.000004 28 TACGCGC 35 1.2121382E-7 45.000004 34 TGCGATA 25 3.8911654E-5 45.000004 1 TGTTACG 45 3.8562575E-10 45.000004 1 ATGCGCA 25 3.8911654E-5 45.000004 12 TCGAGTA 25 3.8911654E-5 45.000004 12 CGGTACC 35 1.2121382E-7 45.000004 23 TATACGT 25 3.8911654E-5 45.000004 21 GCTAACG 45 3.8562575E-10 45.000004 1 TACGTCT 25 3.8911654E-5 45.000004 31 ACAGTCG 20 7.033722E-4 45.0 18 CACGATT 20 7.033722E-4 45.0 18 TCGATTG 20 7.033722E-4 45.0 1 GCGCATC 20 7.033722E-4 45.0 19 >>END_MODULE