##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545542_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1812230 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28744530219674 31.0 31.0 33.0 30.0 34.0 2 31.635853065008305 31.0 31.0 34.0 30.0 34.0 3 31.737176296606943 31.0 31.0 34.0 30.0 34.0 4 35.45974793486478 37.0 35.0 37.0 33.0 37.0 5 35.31496002163081 37.0 35.0 37.0 33.0 37.0 6 35.39911545444011 37.0 35.0 37.0 33.0 37.0 7 35.82954205592005 37.0 35.0 37.0 35.0 37.0 8 35.84710053359673 37.0 35.0 37.0 35.0 37.0 9 37.55312018893849 39.0 37.0 39.0 35.0 39.0 10 36.88634775939036 39.0 37.0 39.0 32.0 39.0 11 36.532647621990584 39.0 35.0 39.0 32.0 39.0 12 35.82260860928248 37.0 35.0 39.0 31.0 39.0 13 35.4954707735773 37.0 35.0 39.0 30.0 39.0 14 36.48530981166849 38.0 35.0 41.0 31.0 41.0 15 36.69565728411956 38.0 35.0 41.0 31.0 41.0 16 36.84562445164245 38.0 35.0 41.0 32.0 41.0 17 36.78879446869327 38.0 35.0 41.0 32.0 41.0 18 36.72739442565237 38.0 35.0 40.0 31.0 41.0 19 36.670497674136286 38.0 35.0 40.0 31.0 41.0 20 36.51666731044073 38.0 35.0 40.0 31.0 41.0 21 36.33594632027943 38.0 35.0 40.0 31.0 41.0 22 36.25676652522031 38.0 35.0 40.0 30.0 41.0 23 36.1998708773169 38.0 35.0 40.0 30.0 41.0 24 36.14353752007196 38.0 35.0 40.0 30.0 41.0 25 36.03271714958918 37.0 34.0 40.0 30.0 41.0 26 35.91770360274358 37.0 34.0 40.0 30.0 41.0 27 35.86942109997075 37.0 34.0 40.0 30.0 41.0 28 35.85018237199473 37.0 34.0 40.0 30.0 41.0 29 35.8306434613708 37.0 34.0 40.0 30.0 41.0 30 35.75390651297021 37.0 34.0 40.0 30.0 41.0 31 35.59086539787996 37.0 34.0 40.0 29.0 41.0 32 35.42471816491284 37.0 34.0 40.0 29.0 41.0 33 35.25236862870607 37.0 34.0 40.0 27.0 41.0 34 35.09054590201023 37.0 34.0 40.0 27.0 41.0 35 34.951315230406735 37.0 34.0 40.0 26.0 41.0 36 34.770825998907426 37.0 33.0 40.0 25.0 41.0 37 34.70155278303527 36.0 33.0 40.0 25.0 41.0 38 34.700768114422566 36.0 33.0 40.0 26.0 41.0 39 34.640333180666914 36.0 33.0 40.0 25.0 41.0 40 34.483725023865624 36.0 33.0 40.0 24.0 41.0 41 34.42522748216286 36.0 33.0 40.0 24.0 41.0 42 34.334873056951935 36.0 33.0 40.0 24.0 41.0 43 34.268027237160844 36.0 33.0 40.0 24.0 41.0 44 34.20296595906701 35.0 33.0 40.0 24.0 41.0 45 34.159959276692256 35.0 33.0 40.0 24.0 41.0 46 34.10852982237354 35.0 33.0 40.0 24.0 41.0 47 34.03495306887095 35.0 33.0 40.0 23.0 41.0 48 33.99940625638026 35.0 33.0 40.0 23.0 41.0 49 33.92456034830016 35.0 33.0 39.0 24.0 41.0 50 33.81561280852872 35.0 33.0 39.0 24.0 41.0 51 33.659586255607735 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 6.0 14 25.0 15 55.0 16 148.0 17 480.0 18 1057.0 19 2090.0 20 3555.0 21 5619.0 22 8312.0 23 11960.0 24 16717.0 25 22760.0 26 29552.0 27 35654.0 28 39385.0 29 45097.0 30 52935.0 31 63398.0 32 78044.0 33 101078.0 34 165218.0 35 245256.0 36 132121.0 37 163071.0 38 227314.0 39 361120.0 40 200.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.224171324831836 23.291248903284902 26.93510205658222 14.549477715301038 2 31.495891801813237 25.701870071679643 29.350744662653195 13.451493463853925 3 28.98296573834447 25.430436533994026 31.728809257103123 13.857788470558372 4 26.020703773803543 28.070112513312328 30.33224259613846 15.576941116745665 5 22.80383836488746 33.06782251700943 29.89471535070052 14.233623767402593 6 20.89624385425691 42.53251518846945 26.272051560784227 10.299189396489409 7 87.12404054672972 4.443530898395899 6.7267951639692525 1.7056333909051278 8 87.90782626929253 3.6111310374510963 6.743570076645901 1.7374726166104744 9 84.13336055577935 4.9515238132025186 8.080762375636647 2.834353255381491 10 48.087163329158 25.532410345265227 14.581758386076823 11.798667939499953 11 39.78932034013343 22.233270611346242 21.58925743421089 16.388151614309443 12 37.9005424256303 20.597937347908378 26.36525165128047 15.136268575180855 13 23.11301545609553 35.391423825894066 24.92398867693394 16.57157204107646 14 17.27473885765052 37.2303736280715 27.687600359777733 17.807287154500255 15 16.707316400236174 23.9149004265463 42.13780811486401 17.239975058353522 16 18.017801272465416 19.40912577321863 41.47255039371382 21.10052256060213 17 17.764356621400154 19.863152028164198 29.879264773235185 32.49322657720047 18 21.58870562787284 23.221610943423297 33.54083090998383 21.64885251872003 19 27.74079449076552 25.292043504411694 25.46404153998113 21.50312046484166 20 30.542591172202204 22.269469107122163 27.062569320671216 20.125370400004414 21 23.36171457265358 26.465514862903717 27.984748072816362 22.188022491626338 22 23.195344961732232 23.759677303653508 25.706063799848806 27.33891393476545 23 20.661063992981024 28.437008547480175 25.725652924849495 25.17627453468931 24 20.4300778598743 23.675913101537883 37.20968089039471 18.68432814819311 25 19.631669269353228 26.062806597396577 32.73635244974424 21.569171683505957 26 19.778173852104867 30.63170789579689 26.476054363960422 23.11406388813782 27 18.95570650524492 31.669821159565835 27.920904079504254 21.453568255684985 28 17.71563212175055 27.987176020703775 34.07696594803088 20.220225909514795 29 17.925649614011466 23.999823421971826 34.505278027623426 23.569248936393283 30 19.6093211126623 29.387494964767164 31.035188690177296 19.96799523239324 31 26.973066332639895 27.94959800908273 25.22549566004315 19.85183999823422 32 28.597970456288664 25.236255883635078 25.99410670830965 20.17166695176661 33 26.91385751256739 27.242182283705713 24.810647655098965 21.033312548627933 34 21.244378472931142 26.159483067822514 27.651788128438444 24.9443503308079 35 21.534738968011787 25.550012967448943 29.700313977806346 23.214934086732917 36 28.248235599234096 27.602401461183184 25.068120492431976 19.08124244715075 37 21.21386358243711 32.20220391451416 27.512015583010985 19.071916920037744 38 21.55879772435066 30.831075525733485 25.883800621333936 21.726326128581913 39 21.210718286310236 31.325328462722723 26.418114698465427 21.045838552501614 40 24.31589809240549 26.852882912213126 26.36392731606915 22.46729167931223 41 18.920059815807043 25.946541001969948 27.87455234710826 27.258846835114745 42 21.37002477610458 26.545857865723445 24.866269733974164 27.21784762419781 43 21.92199665605359 25.870446907953188 26.39940846360561 25.808147972387612 44 19.875015864432218 28.925688240455127 28.225721900641748 22.9735739944709 45 18.58649288445727 35.013657206866675 23.838640790628123 22.56120911804793 46 21.429343957444697 32.33314755853286 26.031353636127864 20.206154847894584 47 21.375653200752666 27.999150218239404 27.63319225484624 22.99200432616169 48 22.23106338599405 25.115520656870267 30.0150643130287 22.638351644106987 49 20.758788895449253 25.904493359010722 31.18086556342186 22.155852182118164 50 20.05402184049486 31.283446361664915 28.49185809748211 20.170673700358122 51 19.224381011240297 30.986850454964326 26.481737969242314 23.307030564553063 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1294.0 1 2479.0 2 3664.0 3 8463.5 4 13263.0 5 10174.5 6 7086.0 7 7280.5 8 7475.0 9 7537.5 10 7600.0 11 7888.5 12 8177.0 13 7917.5 14 7658.0 15 7419.0 16 7180.0 17 6702.0 18 6224.0 19 6553.0 20 6882.0 21 7011.5 22 7141.0 23 6969.5 24 6798.0 25 8748.5 26 13622.5 27 16546.0 28 19883.5 29 23221.0 30 25144.5 31 27068.0 32 34088.0 33 41108.0 34 49985.5 35 58863.0 36 61148.0 37 63433.0 38 72127.0 39 80821.0 40 94393.0 41 107965.0 42 127774.5 43 147584.0 44 149146.0 45 150708.0 46 151987.0 47 153266.0 48 145674.5 49 138083.0 50 129587.5 51 121092.0 52 114445.5 53 107799.0 54 97024.0 55 86249.0 56 81413.5 57 76578.0 58 71829.0 59 67080.0 60 66091.5 61 65103.0 62 56693.5 63 48284.0 64 43793.0 65 39302.0 66 34250.0 67 29198.0 68 25551.5 69 21905.0 70 18566.0 71 15227.0 72 12434.0 73 9641.0 74 8043.0 75 5189.5 76 3934.0 77 3119.5 78 2305.0 79 1776.5 80 1248.0 81 914.0 82 580.0 83 445.5 84 311.0 85 199.5 86 88.0 87 50.5 88 13.0 89 13.5 90 14.0 91 14.0 92 14.0 93 9.0 94 4.0 95 6.0 96 8.0 97 4.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1812230.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.736766736083258 #Duplication Level Percentage of deduplicated Percentage of total 1 79.92483946022774 13.376833944647345 2 6.543642314344904 2.1903883003910933 3 2.354982959781686 1.1824440139595107 4 1.2580310075666616 0.8422148608161203 5 0.7790683231267206 0.6519542397821732 6 0.5364995585553679 0.5387560779331702 7 0.4235871505197488 0.49626355314558573 8 0.3411601441305009 0.456793420156859 9 0.2854372939919596 0.42995676665900223 >10 4.247334028657117 17.879862639996112 >50 1.8525745376026608 22.374629105630344 >100 1.4442111548224708 37.97892123016812 >500 0.007304056415193497 0.792989446566132 >1k 9.960076929809315E-4 0.4370860476973719 >5k 3.3200256432697715E-4 0.37090635245104975 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6675 0.3683307306467722 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3663 0.20212666162683543 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2821 0.1556645679632276 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.014126242254018529 0.0 2 0.0 0.0 0.0 0.05170425387506001 0.0 3 0.0 0.0 0.0 0.07686662289003052 0.0 4 0.0 0.0 0.0 0.12757762535660486 0.0 5 0.0 0.0 0.0 0.2205018126838205 0.0 6 0.0 0.0 0.0 0.3185577989548788 0.0 7 0.0 0.0 0.0 0.38560226902766204 0.0 8 0.0 0.0 0.0 0.5461227327657086 0.0 9 0.0 0.0 0.0 0.6034002306550493 0.0 10 0.0 0.0 0.0 0.7139270401659833 0.0 11 0.0 0.0 0.0 0.8284268553108601 0.0 12 5.518063380475988E-5 0.0 0.0 0.9327182532018563 0.0 13 5.518063380475988E-5 0.0 0.0 0.9692478327806073 0.0 14 5.518063380475988E-5 0.0 0.0 0.9824360042599449 0.0 15 5.518063380475988E-5 0.0 0.0 1.0072672894720869 0.0 16 5.518063380475988E-5 0.0 0.0 1.0616202137697754 0.0 17 5.518063380475988E-5 0.0 0.0 1.1295475739834349 0.0 18 5.518063380475988E-5 0.0 0.0 1.2250100704656695 0.0 19 5.518063380475988E-5 0.0 0.0 1.2694856613123058 0.0 20 5.518063380475988E-5 0.0 0.0 1.3179894384266897 0.0 21 5.518063380475988E-5 0.0 0.0 1.3884551077953682 0.0 22 5.518063380475988E-5 0.0 0.0 1.464052576107889 0.0 23 5.518063380475988E-5 0.0 0.0 1.5568112215336904 0.0 24 5.518063380475988E-5 0.0 0.0 1.6254007493530072 0.0 25 5.518063380475988E-5 0.0 0.0 1.6827334278761525 0.0 26 5.518063380475988E-5 0.0 0.0 1.7408386352725647 0.0 27 5.518063380475988E-5 0.002814212324042754 0.0 1.7999370940774626 0.0 28 1.6554190141427965E-4 0.002814212324042754 0.0 1.8630085585163032 0.0 29 1.6554190141427965E-4 0.002814212324042754 0.0 1.934467479293467 0.0 30 1.6554190141427965E-4 0.002814212324042754 0.0 2.0302058789447255 0.0 31 2.2072253521903952E-4 0.002814212324042754 0.0 2.1112110493701133 0.0 32 2.2072253521903952E-4 0.002814212324042754 0.0 2.185208279302296 0.0 33 2.2072253521903952E-4 0.002814212324042754 0.0 2.266047907826269 0.0 34 2.2072253521903952E-4 0.002814212324042754 0.0 2.34396296275859 0.0 35 2.2072253521903952E-4 0.002814212324042754 0.0 2.459566390579562 0.0 36 2.2072253521903952E-4 0.002814212324042754 0.0 2.549400462413711 0.0 37 2.2072253521903952E-4 0.002814212324042754 0.0 2.6354822511491367 0.0 38 2.2072253521903952E-4 0.002814212324042754 0.0 2.7316069152370286 0.0 39 2.2072253521903952E-4 0.002814212324042754 0.0 2.8276212180573106 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 300 0.0 45.000004 31 ACGTTAC 20 7.0343644E-4 45.0 19 CGCATTA 20 7.0343644E-4 45.0 31 TACGGGT 80 0.0 45.0 4 ACGGGTA 170 0.0 45.0 5 CCGTAGT 25 3.8916995E-5 45.0 29 ACGGCAC 20 7.0343644E-4 45.0 5 CCGAATA 20 7.0343644E-4 45.0 25 TATACGC 20 7.0343644E-4 45.0 16 CGACGGT 305 0.0 43.52459 28 ACGTAAG 140 0.0 43.392857 1 CTATGCG 75 0.0 42.000004 1 GTACGGG 630 0.0 41.07143 3 CGTAAGG 225 0.0 41.0 2 TATAGCG 110 0.0 40.909092 1 CGTTTTT 5590 0.0 40.854206 1 TACGCCC 45 1.929402E-8 40.0 41 ATAGCGG 265 0.0 39.905655 2 ACCGTTA 40 3.4596997E-7 39.375 26 CACCGTA 40 3.4596997E-7 39.375 24 >>END_MODULE