##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545539_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 905258 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.471245766400298 31.0 31.0 33.0 30.0 34.0 2 31.8204522909491 31.0 31.0 34.0 30.0 34.0 3 31.878887565754734 31.0 31.0 34.0 30.0 34.0 4 35.56580665401466 37.0 35.0 37.0 33.0 37.0 5 35.44753871272057 37.0 35.0 37.0 33.0 37.0 6 35.532769663455056 37.0 35.0 37.0 33.0 37.0 7 35.965473931188676 37.0 35.0 37.0 35.0 37.0 8 36.00744980988845 37.0 35.0 37.0 35.0 37.0 9 37.76109020853723 39.0 38.0 39.0 35.0 39.0 10 37.17090045047931 39.0 37.0 39.0 33.0 39.0 11 36.70391866186214 39.0 35.0 39.0 32.0 39.0 12 35.400123500703664 35.0 35.0 39.0 31.0 39.0 13 34.84098787307044 35.0 34.0 39.0 30.0 39.0 14 35.70007997719987 36.0 35.0 40.0 30.0 41.0 15 36.077820908514475 36.0 35.0 40.0 31.0 41.0 16 36.34080781390499 36.0 35.0 40.0 32.0 41.0 17 36.289814616385605 36.0 35.0 40.0 32.0 41.0 18 36.25848653091163 36.0 35.0 40.0 31.0 41.0 19 36.185109659345734 36.0 35.0 40.0 31.0 41.0 20 35.97926447487899 36.0 35.0 40.0 31.0 41.0 21 35.741148932127636 35.0 34.0 40.0 31.0 41.0 22 35.641007315041676 35.0 34.0 40.0 30.0 41.0 23 35.67813706147861 35.0 34.0 40.0 31.0 41.0 24 35.627663052963904 35.0 34.0 40.0 31.0 41.0 25 35.52227983624558 35.0 34.0 40.0 31.0 41.0 26 35.40687848105181 35.0 34.0 40.0 30.0 41.0 27 35.336037903006655 35.0 34.0 40.0 30.0 41.0 28 35.3996396607376 35.0 34.0 40.0 30.0 41.0 29 35.45658806660643 36.0 34.0 40.0 30.0 41.0 30 35.40488015571251 36.0 34.0 40.0 30.0 41.0 31 35.11553833271841 35.0 34.0 40.0 30.0 41.0 32 34.876835112200055 35.0 34.0 40.0 29.0 41.0 33 34.64770485320207 35.0 34.0 40.0 28.0 41.0 34 34.43894558236436 35.0 34.0 40.0 27.0 41.0 35 34.275574477110396 35.0 33.0 40.0 26.0 41.0 36 34.06560229238515 35.0 33.0 40.0 24.0 41.0 37 33.9714423954276 35.0 33.0 39.0 24.0 41.0 38 34.010368314889234 35.0 33.0 39.0 25.0 41.0 39 34.00217838450475 35.0 33.0 39.0 24.0 41.0 40 33.79359254488776 35.0 33.0 39.0 23.0 41.0 41 33.840969093893676 35.0 33.0 39.0 23.0 41.0 42 33.80347149652364 35.0 33.0 39.0 23.0 41.0 43 33.677950374368415 35.0 33.0 39.0 23.0 41.0 44 33.59133197386822 35.0 33.0 39.0 23.0 41.0 45 33.54105569903829 35.0 33.0 39.0 23.0 41.0 46 33.52780422818688 35.0 33.0 39.0 23.0 41.0 47 33.48859441175886 35.0 33.0 39.0 23.0 41.0 48 33.498755051046224 35.0 33.0 38.0 23.0 41.0 49 33.49152727730658 35.0 33.0 38.0 24.0 41.0 50 33.33661784817146 35.0 33.0 38.0 24.0 40.0 51 33.13445448700812 35.0 33.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 3.0 15 20.0 16 56.0 17 221.0 18 504.0 19 912.0 20 1638.0 21 2631.0 22 4056.0 23 5753.0 24 8706.0 25 12377.0 26 16388.0 27 19112.0 28 20473.0 29 22883.0 30 26861.0 31 32830.0 32 41418.0 33 55177.0 34 104556.0 35 180740.0 36 53953.0 37 62703.0 38 86625.0 39 144583.0 40 76.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.859646642172727 23.761292360851822 29.06961330361068 15.309447693364763 2 30.207300018337314 25.873286952448915 30.143340351590375 13.776072677623397 3 27.975560558426437 24.583378440179484 33.47288839203851 13.968172609355564 4 24.13146307461519 28.196492049780286 32.51625503447636 15.155789841128165 5 22.064869904491317 33.36739360491705 30.634139659632943 13.933596830958688 6 20.73453092930413 41.032722163184424 27.264603019249762 10.96814388826169 7 87.14797328496407 4.436193880639553 7.075551942098275 1.3402808922981073 8 89.43825959008372 2.724416685629953 6.71852665207046 1.1187970722158764 9 86.53996982075827 3.7057943702237375 7.844835394992367 1.909400414025615 10 61.00360339262399 17.741792947424933 12.10870271237592 9.145900947575166 11 54.03520322383232 17.245691283589874 17.202499177030194 11.516606315547612 12 48.3255602270292 18.51162872904741 22.096573573500596 11.066237470422797 13 20.008108185732688 47.0101341275084 21.32773198358921 11.654025703169705 14 12.97530648721138 48.01117471483268 26.6004829562401 12.413035841715843 15 11.668938578836089 20.833176840193623 55.660375274231214 11.837509306739074 16 13.863892945436548 14.05842312357361 53.38323439284712 18.694449538142717 17 13.703165285476626 15.064986998181734 29.386208130720743 41.845639585620894 18 20.2847144129077 19.926915862660145 38.8629539865983 20.925415737833855 19 29.51821469680467 21.792461375652024 26.93707208331768 21.752251844225622 20 33.39169606896598 20.635332689686255 26.106038278590194 19.866932962757577 21 21.51762260040784 26.42694126978165 29.915780915495915 22.139655214314594 22 23.070218655896994 22.789414730386255 24.836676395016667 29.303690218700083 23 17.600175861467118 29.105956533938393 24.42287171171092 28.870995892883577 24 19.16790572411401 20.672559645979376 44.40303206378734 15.756502566119272 25 16.123248841766657 22.744897034878456 40.46824220277534 20.663611920579548 26 15.739822238522056 34.70259307291402 27.524418453081882 22.033166235482042 27 15.03670776728844 37.92366375110742 28.274370400482514 18.765258081121626 28 12.624467278941474 29.864966672484528 40.533196061233376 16.977369987340627 29 12.882404795097088 22.407645113326808 40.78240678348051 23.927543308095593 30 17.191783999699535 31.597290496190038 33.42306834073822 17.78785716337221 31 30.49760399797627 27.019148132355635 24.695280240550208 17.787967629117887 32 32.825448656626065 24.593430823036087 26.97617695728731 15.604943563050533 33 31.491464311831546 27.881222811618343 23.03984057583584 17.58747230071427 34 19.281464510669885 28.67624478325516 26.746076809042286 25.296213897032672 35 19.05523066352355 26.31791157879853 31.590331154212393 23.036526603465532 36 34.88000106047116 23.14003300716481 25.4056854509985 16.574280481365534 37 21.153748434148056 32.43362665671002 29.806309361530083 16.606315547611842 38 20.787664952974733 33.88437329468505 22.416371907235284 22.91158984510493 39 20.40191856907092 32.53359815654764 27.680617017469057 19.383866256912395 40 24.647006709689393 25.516813991149483 24.473575488976625 25.3626038101845 41 16.401953918109534 23.237905657834563 29.140200915098234 31.219939508957665 42 21.931979612441978 23.4210578641669 25.301074389842455 29.34588813354867 43 22.60327994892064 23.32307474775147 27.723256795300344 26.350388508027546 44 18.951282396841563 29.734396161094406 29.057683003077578 22.256638438986453 45 15.940648964162705 41.43293955977191 21.450128029799238 21.176283446266147 46 23.214818316988083 33.62301134041345 25.36470265935236 17.7974676832461 47 21.789478800518747 28.431563156580776 25.597674916984992 24.181283125915485 48 23.11550961162453 24.978956275448546 31.001438264008712 20.904095848918207 49 23.015206714549883 23.113189830965318 33.307963033742865 20.563640420741933 50 20.808763910399026 34.68624414255383 25.521895415450622 18.983096531596516 51 18.10710316837852 35.92335002838969 22.896787435184223 23.072759368047564 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1062.0 1 1384.5 2 1707.0 3 4625.5 4 7544.0 5 5664.5 6 3785.0 7 4124.5 8 4464.0 9 4967.5 10 5471.0 11 5575.5 12 5680.0 13 5613.5 14 5547.0 15 5069.5 16 4592.0 17 4379.0 18 4166.0 19 3839.0 20 3512.0 21 3310.5 22 3109.0 23 3390.0 24 3671.0 25 3621.5 26 4381.5 27 5191.0 28 5886.5 29 6582.0 30 8022.0 31 9462.0 32 11159.5 33 12857.0 34 15793.5 35 18730.0 36 22371.5 37 26013.0 38 27993.5 39 29974.0 40 48085.5 41 66197.0 42 83699.0 43 101201.0 44 101919.5 45 102638.0 46 97540.0 47 92442.0 48 82145.0 49 71848.0 50 67003.5 51 62159.0 52 57399.5 53 52640.0 54 47200.0 55 41760.0 56 37943.0 57 34126.0 58 32024.0 59 29922.0 60 26945.5 61 23969.0 62 22233.5 63 20498.0 64 17440.0 65 14382.0 66 11641.0 67 8900.0 68 7289.5 69 5679.0 70 4875.5 71 4072.0 72 3508.0 73 2944.0 74 2270.0 75 1126.5 76 657.0 77 580.0 78 503.0 79 377.0 80 251.0 81 179.5 82 108.0 83 84.5 84 61.0 85 33.5 86 6.0 87 3.0 88 0.0 89 0.5 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 2.5 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 905258.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.139242710674008 #Duplication Level Percentage of deduplicated Percentage of total 1 81.59485639521435 13.168791913049557 2 6.388976152555957 2.0622647359761763 3 2.008484926917083 0.9724627714873542 4 0.9667963687680396 0.6241344498938274 5 0.5977209004782364 0.4823381343030442 6 0.43781826513451927 0.42396331465033377 7 0.3569130548648022 0.40322144933498055 8 0.2642604694224866 0.3411971083876927 9 0.21902323728517265 0.31813822672406517 >10 3.6373313425627267 14.854279260947036 >50 1.8915405243658094 21.96571398138214 >100 1.629434872834657 42.8447228140401 >500 0.00547479167689091 0.5545631214294249 >1k 0.0013686979192227275 0.984208718394265 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4830 0.5335495516195383 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4081 0.450810708107523 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.021319888915646148 0.0 2 0.0 0.0 0.0 0.07699462473681536 0.0 3 0.0 0.0 0.0 0.10262267773386151 0.0 4 0.0 0.0 0.0 0.1485764279354615 0.0 5 0.0 0.0 0.0 0.24048392833866147 0.0 6 0.0 0.0 0.0 0.32852512764316916 0.0 7 0.0 0.0 0.0 0.3825428772791845 0.0 8 0.0 0.0 0.0 0.5030610058127075 0.0 9 0.0 0.0 0.0 0.5450379891699383 0.0 10 0.0 0.0 0.0 0.633079188474446 0.0 11 0.0 0.0 0.0 0.7672950694719075 0.0 12 0.0 0.0 0.0 0.8564409262331844 0.0 13 0.0 0.0 0.0 0.8975341836249997 0.0 14 0.0 0.0 0.0 0.9134412510024766 0.0 15 1.1046574567692305E-4 0.0 0.0 0.9407262901846767 0.0 16 1.1046574567692305E-4 0.0 0.0 1.0007091900872458 0.0 17 1.1046574567692305E-4 0.0 0.0 1.0772619518413535 0.0 18 1.1046574567692305E-4 0.0 0.0 1.1780067118987074 0.0 19 1.1046574567692305E-4 0.0 0.0 1.227495365961969 0.0 20 1.1046574567692305E-4 0.0 0.0 1.274443307874661 0.0 21 1.1046574567692305E-4 0.0 0.0 1.3382925088759228 0.0 22 1.1046574567692305E-4 0.0 0.0 1.400816120929061 0.0 23 1.1046574567692305E-4 0.0 0.0 1.4855433478632611 0.0 24 1.1046574567692305E-4 0.0 0.0 1.5491716173731687 0.0 25 1.1046574567692305E-4 0.0 0.0 1.596119559285861 0.0 26 1.1046574567692305E-4 0.0 0.0 1.649474514447815 0.0 27 1.1046574567692305E-4 0.0 0.0 1.6998468944764917 0.0 28 1.1046574567692305E-4 0.0 0.0 1.7547483700779225 0.0 29 1.1046574567692305E-4 0.0 0.0 1.8136266125237226 0.0 30 1.1046574567692305E-4 0.0 0.0 1.8879700593642916 0.0 31 1.1046574567692305E-4 0.0 0.0 1.9588890680888764 0.0 32 1.1046574567692305E-4 0.0 0.0 2.0271568989172146 0.0 33 1.1046574567692305E-4 0.0 0.0 2.0906747026814454 0.0 34 1.1046574567692305E-4 0.0 0.0 2.1640239578109224 0.0 35 1.1046574567692305E-4 0.0 0.0 2.2762571554186763 0.0 36 1.1046574567692305E-4 0.0 0.0 2.3532517801554915 0.0 37 1.1046574567692305E-4 0.0 0.0 2.4322347883144917 0.0 38 1.1046574567692305E-4 0.0 0.0 2.509229413051307 0.0 39 1.1046574567692305E-4 0.0 0.0 2.5856717090597376 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCATCG 20 7.032491E-4 45.0 43 CGGGTAT 20 7.032491E-4 45.0 6 CTCACGA 160 0.0 45.0 24 GGTACGA 20 7.032491E-4 45.0 1 CGTATGG 25 3.890147E-5 45.0 2 CTACTAT 25 3.890147E-5 45.0 45 CGAGTGT 20 7.032491E-4 45.0 31 TCTCTAG 25 3.890147E-5 45.0 24 CGAAACC 25 3.890147E-5 45.0 29 ACGTTAC 20 7.032491E-4 45.0 26 GCAACGA 25 3.890147E-5 45.0 32 CTATATG 25 3.890147E-5 45.0 1 CATGACG 20 7.032491E-4 45.0 1 CTATAGC 45 3.8380676E-10 45.0 25 CGCATGT 20 7.032491E-4 45.0 38 TCTTACG 25 3.890147E-5 45.0 1 ACATTCG 20 7.032491E-4 45.0 16 CAACCCG 25 3.890147E-5 45.0 23 ATTCGCA 25 3.890147E-5 45.0 18 TTACTCG 35 1.2115379E-7 45.0 1 >>END_MODULE