##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545538_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1563133 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31985314109548 31.0 31.0 33.0 30.0 34.0 2 31.665718144265394 31.0 31.0 34.0 30.0 34.0 3 31.780290608668615 31.0 31.0 34.0 30.0 34.0 4 35.49951731554513 37.0 35.0 37.0 33.0 37.0 5 35.36754837880078 37.0 35.0 37.0 33.0 37.0 6 35.432549245649604 37.0 35.0 37.0 33.0 37.0 7 35.82651828091404 37.0 35.0 37.0 35.0 37.0 8 35.83971037653226 37.0 35.0 37.0 35.0 37.0 9 37.52253391106195 39.0 37.0 39.0 35.0 39.0 10 36.92727298316906 39.0 37.0 39.0 32.0 39.0 11 36.56449643120579 39.0 35.0 39.0 32.0 39.0 12 35.798352411471065 37.0 35.0 39.0 31.0 39.0 13 35.46585799161044 37.0 35.0 39.0 30.0 39.0 14 36.454026624733785 38.0 35.0 41.0 31.0 41.0 15 36.66618771403329 38.0 35.0 41.0 31.0 41.0 16 36.84214778908768 38.0 35.0 41.0 32.0 41.0 17 36.78891559451435 38.0 35.0 41.0 32.0 41.0 18 36.7223531203039 38.0 35.0 40.0 31.0 41.0 19 36.666254886820255 38.0 35.0 40.0 31.0 41.0 20 36.519090186183774 38.0 35.0 40.0 31.0 41.0 21 36.338898225550864 38.0 35.0 40.0 31.0 41.0 22 36.271192534480434 38.0 35.0 40.0 31.0 41.0 23 36.20528195617391 37.0 35.0 40.0 31.0 41.0 24 36.14761955636533 37.0 35.0 40.0 31.0 41.0 25 36.03388771141035 37.0 35.0 40.0 30.0 41.0 26 35.943923517704505 37.0 34.0 40.0 30.0 41.0 27 35.88759305830022 37.0 34.0 40.0 30.0 41.0 28 35.864784378552564 37.0 35.0 40.0 30.0 41.0 29 35.867248020481945 37.0 35.0 40.0 30.0 41.0 30 35.765053261622654 37.0 34.0 40.0 30.0 41.0 31 35.61040295355546 37.0 34.0 40.0 29.0 41.0 32 35.44428273217954 37.0 34.0 40.0 29.0 41.0 33 35.299910500258136 37.0 34.0 40.0 29.0 41.0 34 35.142941771429555 37.0 34.0 40.0 27.0 41.0 35 34.99682176756552 36.0 34.0 40.0 27.0 41.0 36 34.83202005203652 36.0 34.0 40.0 26.0 41.0 37 34.770668906612556 36.0 33.0 40.0 26.0 41.0 38 34.74968988563353 36.0 33.0 40.0 26.0 41.0 39 34.70375841339157 36.0 34.0 40.0 26.0 41.0 40 34.51725860819265 36.0 33.0 40.0 24.0 41.0 41 34.48619663202044 36.0 33.0 40.0 24.0 41.0 42 34.40920958101454 36.0 33.0 40.0 24.0 41.0 43 34.34138169944592 35.0 33.0 40.0 24.0 41.0 44 34.27987253803739 35.0 33.0 40.0 24.0 41.0 45 34.241408760482955 35.0 33.0 40.0 24.0 41.0 46 34.21297739859628 35.0 33.0 40.0 24.0 41.0 47 34.174362002465564 35.0 33.0 40.0 24.0 41.0 48 34.108374015518834 35.0 33.0 40.0 24.0 41.0 49 34.051794696932376 35.0 33.0 39.0 24.0 41.0 50 33.93226807955561 35.0 33.0 39.0 24.0 41.0 51 33.78621844718268 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 8.0 14 28.0 15 46.0 16 157.0 17 406.0 18 888.0 19 1684.0 20 3029.0 21 4432.0 22 6689.0 23 9664.0 24 13421.0 25 18757.0 26 24754.0 27 29222.0 28 32823.0 29 37812.0 30 43989.0 31 54664.0 32 67969.0 33 87809.0 34 148711.0 35 222549.0 36 111237.0 37 137839.0 38 190344.0 39 314022.0 40 176.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.28221846765439 23.052229080954724 27.96671812315395 13.698834328236945 2 32.20180240580936 25.63531062296043 29.02331407500193 13.13957289622828 3 29.722422852054176 24.971899384121503 31.07003690664838 14.235640857175941 4 26.612002945366775 27.63174982551069 30.053168860231345 15.703078368891193 5 23.7929849859225 32.444967894606535 29.20749545943947 14.554551660031487 6 22.273472570792123 41.23327957377907 26.01493283041174 10.478315025017066 7 86.05736044213768 4.718792322854165 7.202841984655177 2.0210052503529767 8 87.08382460097765 3.7966059190100903 7.040027943879376 2.079541536132882 9 82.56181655687648 5.509639934669667 8.467545627915218 3.460997880538636 10 49.21801279865501 23.536704810147313 14.633367730065197 12.61191466113248 11 41.740977895035165 22.977315429973007 20.42033531375769 14.861371361234138 12 38.96226360776722 21.160131607483176 25.434879821486717 14.442724963262881 13 22.2796140827428 36.767760644807574 23.968657817345036 16.983967455104587 14 17.291234974886972 38.93961678244909 27.236581915934217 16.532566326729714 15 16.038430511031372 24.598930481283425 43.63441882424593 15.728220183439284 16 17.77334366301524 19.4085212198834 43.739912086815394 19.078223030285972 17 18.07088712220905 20.066174791268562 29.11031882763655 32.752619258885844 18 21.801599735914987 23.391995434809452 34.17079672683003 20.635608102445538 19 28.53269683385867 24.138125162734074 27.000453576247192 20.32872442716007 20 30.765840142841334 22.394255639155467 26.0331014699325 20.8068027480707 21 23.07673115467462 27.232999367296323 28.104454323464477 21.58581515456458 22 23.06911823881909 24.229991945662974 25.820579566805897 26.880310248712043 23 20.46479730131729 29.35892211347339 25.617397879770948 24.55888270543837 24 20.019729607141553 23.82446023466973 38.025874957537205 18.129935200651513 25 19.523162776296065 24.777993939095396 34.515489085061866 21.18335419954668 26 18.256411962385798 32.572852086162854 27.4732220482838 21.697513903167547 27 19.259909425493543 32.97038703680365 27.68094589519894 20.088757642503868 28 17.370306941251958 28.617654415843052 35.71647454183361 18.295564101071374 29 18.184441119213783 24.822200030323714 34.60262178586211 22.390737064600387 30 19.723529603686956 30.03877469159694 29.903213610102274 20.33448209461383 31 27.859561534431172 27.426904812322434 24.801984220152733 19.911549433093665 32 28.474096573995944 25.54952137789939 27.164099280099645 18.812282768005026 33 27.7867590281825 27.301771506327356 24.78471121779145 20.126758247698692 34 20.813775923098035 27.172160014534914 27.80460779728916 24.209456265077893 35 21.455052129281384 26.167191147522317 29.766884839613777 22.610871883582522 36 29.339282070047783 26.338449767230298 25.180262971864835 19.14200519085708 37 21.95680086083526 33.056752048610065 27.345273882644662 17.64117320791001 38 21.773451139474375 32.84973191660595 23.84480399300635 21.532012950913327 39 22.700115729115822 30.938634140536987 26.315291149249614 20.045958981097577 40 24.494716700370343 27.016575045117726 26.366406441422452 22.122301813089482 41 19.10515611915301 25.648169413607157 27.869285595019743 27.377388872220088 42 21.9562890681727 26.16629551036284 24.925710096325776 26.95170532513868 43 22.461044581619095 26.156827346105544 26.260401386190424 25.121726686084934 44 19.96835841863744 29.41969749215198 28.36655614077625 22.24538794843433 45 18.68586998035356 35.54662335194766 23.70009461766849 22.067412050030292 46 20.879029487573995 33.30138894131209 26.11249330671159 19.707088264402326 47 22.560844150817623 27.561186412160705 27.40739271706246 22.470576719959208 48 23.10455988070113 24.510966117406515 30.880673621502456 21.503800380389894 49 21.628485867805235 25.7221874274294 31.22811686529553 21.421209839469835 50 19.99957777105339 31.965993936536428 27.52811181134299 20.50631648106719 51 19.332520009493752 31.877197909582872 25.943665702150742 22.846616378772634 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1079.0 1 2604.5 2 4130.0 3 7554.5 4 10979.0 5 8511.0 6 6043.0 7 6283.5 8 6524.0 9 6816.0 10 7108.0 11 6994.0 12 6880.0 13 6661.0 14 6442.0 15 6474.0 16 6506.0 17 6387.0 18 6268.0 19 6016.5 20 5765.0 21 5560.5 22 5356.0 23 6422.5 24 7489.0 25 8056.0 26 11469.0 27 14315.0 28 18213.0 29 22111.0 30 24727.5 31 27344.0 32 31968.5 33 36593.0 34 41626.5 35 46660.0 36 45624.0 37 44588.0 38 52398.0 39 60208.0 40 76583.5 41 92959.0 42 114570.5 43 136182.0 44 141118.5 45 146055.0 46 142734.5 47 139414.0 48 129976.5 49 120539.0 50 113843.5 51 107148.0 52 98883.0 53 90618.0 54 81717.5 55 72817.0 56 70494.0 57 68171.0 58 63492.0 59 58813.0 60 55822.5 61 52832.0 62 46998.5 63 41165.0 64 35411.0 65 29657.0 66 25230.5 67 20804.0 68 18130.5 69 15457.0 70 13842.0 71 12227.0 72 9940.0 73 7653.0 74 6194.5 75 3563.0 76 2390.0 77 1865.0 78 1340.0 79 967.0 80 594.0 81 431.0 82 268.0 83 208.0 84 148.0 85 121.5 86 95.0 87 53.5 88 12.0 89 12.0 90 12.0 91 9.5 92 7.0 93 6.5 94 6.0 95 4.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1563133.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.74055652836495 #Duplication Level Percentage of deduplicated Percentage of total 1 80.28879555280473 12.637903249932592 2 6.60660381868435 2.0798324173702554 3 2.23725978360403 1.056471422773703 4 1.16434065855281 0.7330947981689672 5 0.7096903365994734 0.5585460430439181 6 0.4730769916884487 0.4467897077964517 7 0.3727744788855675 0.41073744300610426 8 0.2873110541470171 0.36179487112201963 9 0.256223476900761 0.3629790109845576 >10 3.9721681392293458 16.124875090929073 >50 1.9864999965216519 22.63390485886608 >100 1.6358448988068472 40.85632652366051 >500 0.006955818729293747 0.7261660958410008 >1k 0.0020458290380275727 0.6683304280746842 >5k 4.0916580760551454E-4 0.34224803843007345 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5314 0.3399582761031851 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3915 0.25045853423860925 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2505 0.16025507746301818 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.018296587686396488 0.0 2 0.0 0.0 0.0 0.0622467825834398 0.0 3 0.0 0.0 0.0 0.08790038979408663 0.0 4 0.0 0.0 0.0 0.14125477486560645 0.0 5 0.0 0.0 0.0 0.23644821010112382 0.0 6 0.0 0.0 0.0 0.3322813861648369 0.0 7 0.0 0.0 0.0 0.3881307604663199 0.0 8 0.0 0.0 0.0 0.5263787534394067 0.0 9 0.0 0.0 0.0 0.5762145639558502 0.0 10 6.397408281956813E-5 0.0 0.0 0.6660981503173434 0.0 11 6.397408281956813E-5 0.0 0.0 0.7747261429449701 0.0 12 6.397408281956813E-5 0.0 0.0 0.8691518891866526 0.0 13 6.397408281956813E-5 0.0 0.0 0.9026743085841064 0.0 14 1.2794816563913627E-4 0.0 0.0 0.916364762307494 0.0 15 1.2794816563913627E-4 0.0 0.0 0.9372203133066732 0.0 16 1.2794816563913627E-4 0.0 0.0 0.99102251695793 0.0 17 1.2794816563913627E-4 0.0 0.0 1.0523096882990763 0.0 18 1.2794816563913627E-4 0.0 0.0 1.1411696893354564 0.0 19 1.2794816563913627E-4 0.0 0.0 1.18358450624483 0.0 20 1.919222484587044E-4 0.0 0.0 1.2275347011418734 0.0 21 1.919222484587044E-4 0.0 0.0 1.286390857335876 0.0 22 1.919222484587044E-4 0.0 0.0 1.3476140545942028 0.0 23 1.919222484587044E-4 0.0 0.0 1.4232314204869323 0.0 24 1.919222484587044E-4 0.0 0.0 1.4859899957329288 0.0 25 1.919222484587044E-4 0.0 0.0 1.5347382468414397 0.0 26 1.919222484587044E-4 0.0 0.0 1.5848939277719811 0.0 27 1.919222484587044E-4 0.0 0.0 1.6311471896505287 0.0 28 1.919222484587044E-4 0.0 0.0 1.6834779893969356 0.0 29 1.919222484587044E-4 0.0 0.0 1.739519285946877 0.0 30 1.919222484587044E-4 0.0 0.0 1.8131534552722002 0.0 31 1.919222484587044E-4 0.0 0.0 1.882053542468875 0.0 32 1.919222484587044E-4 0.0 0.0 1.951977214990663 0.0 33 1.919222484587044E-4 0.0 0.0 2.017038857218164 0.0 34 1.919222484587044E-4 0.0 0.0 2.0860668925804777 0.0 35 1.919222484587044E-4 0.0 0.0 2.176718167935806 0.0 36 1.919222484587044E-4 0.0 0.0 2.25169579300034 0.0 37 1.919222484587044E-4 0.0 0.0 2.331343526110702 0.0 38 1.919222484587044E-4 0.0 0.0 2.406001280761138 0.0 39 1.919222484587044E-4 0.0 0.0 2.486736573279433 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGGC 20 7.034067E-4 45.0 3 CAAACCG 20 7.034067E-4 45.0 10 TCGATAG 45 3.8562575E-10 45.0 1 CCCGTAA 20 7.034067E-4 45.0 39 CCGTAAC 20 7.034067E-4 45.0 40 GGTATAC 25 3.891452E-5 45.0 8 CATACGT 40 6.8175723E-9 45.0 39 CATACGC 20 7.034067E-4 45.0 20 CGGTCTA 110 0.0 45.0 31 TATACGC 20 7.034067E-4 45.0 1 GCGTATT 20 7.034067E-4 45.0 31 TGACGTA 30 2.1660053E-6 44.999996 26 CTCACGA 115 0.0 43.04348 24 AGTACGG 165 0.0 42.272728 2 ATGTACG 65 0.0 41.53846 1 TCACGAC 120 0.0 41.249996 25 TAATGCG 55 6.184564E-11 40.909092 1 TCGAACG 55 6.184564E-11 40.909092 1 ATGGGCG 430 0.0 40.813953 5 GGCGATA 625 0.0 40.32 8 >>END_MODULE