##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545537_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1869685 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.329245835528443 31.0 31.0 33.0 30.0 34.0 2 31.66756592688073 31.0 31.0 34.0 30.0 34.0 3 31.763679978178143 31.0 31.0 34.0 30.0 34.0 4 35.46319674169713 37.0 35.0 37.0 33.0 37.0 5 35.32344699775631 37.0 35.0 37.0 33.0 37.0 6 35.39837512736103 37.0 35.0 37.0 33.0 37.0 7 35.8430329173096 37.0 35.0 37.0 35.0 37.0 8 35.87252398131236 37.0 35.0 37.0 35.0 37.0 9 37.5375648839243 39.0 37.0 39.0 35.0 39.0 10 36.923343236962374 39.0 37.0 39.0 32.0 39.0 11 36.5263175347719 39.0 35.0 39.0 32.0 39.0 12 35.66955075320174 37.0 35.0 39.0 31.0 39.0 13 35.29278140435421 37.0 35.0 39.0 30.0 39.0 14 36.24740584643937 38.0 35.0 40.0 31.0 41.0 15 36.49543104854561 38.0 35.0 40.0 31.0 41.0 16 36.67372953197999 38.0 35.0 40.0 32.0 41.0 17 36.62735701468429 38.0 35.0 40.0 32.0 41.0 18 36.559626889021416 38.0 35.0 40.0 31.0 41.0 19 36.4820673001067 37.0 35.0 40.0 31.0 41.0 20 36.34814153186232 37.0 35.0 40.0 31.0 41.0 21 36.14369532835745 37.0 35.0 40.0 31.0 41.0 22 36.06439587417132 37.0 35.0 40.0 30.0 41.0 23 36.02864439731827 37.0 34.0 40.0 30.0 41.0 24 35.956486253031926 37.0 34.0 40.0 30.0 41.0 25 35.837422346545004 37.0 34.0 40.0 30.0 41.0 26 35.74803456197167 37.0 34.0 40.0 30.0 41.0 27 35.67414992365024 36.0 34.0 40.0 30.0 41.0 28 35.63966978394756 36.0 34.0 40.0 30.0 41.0 29 35.641232079200506 36.0 34.0 40.0 30.0 41.0 30 35.56611514773879 36.0 34.0 40.0 30.0 41.0 31 35.39877305535425 36.0 34.0 40.0 29.0 41.0 32 35.21804261145594 36.0 34.0 40.0 29.0 41.0 33 35.0463243808449 36.0 34.0 40.0 27.0 41.0 34 34.887831907513835 36.0 34.0 40.0 27.0 41.0 35 34.73726750762829 36.0 34.0 40.0 26.0 41.0 36 34.56025801137625 36.0 33.0 40.0 25.0 41.0 37 34.44948534111361 36.0 33.0 40.0 25.0 41.0 38 34.43926383321255 35.0 33.0 40.0 25.0 41.0 39 34.38397537553117 35.0 33.0 40.0 24.0 41.0 40 34.199322880592185 35.0 33.0 40.0 23.0 41.0 41 34.172749955206356 35.0 33.0 40.0 24.0 41.0 42 34.11351591310836 35.0 33.0 40.0 24.0 41.0 43 34.04780056533587 35.0 33.0 40.0 23.0 41.0 44 33.975323115925946 35.0 33.0 40.0 23.0 41.0 45 33.91597408119549 35.0 33.0 40.0 23.0 41.0 46 33.905189911669616 35.0 33.0 40.0 23.0 41.0 47 33.847973856558724 35.0 33.0 39.0 23.0 41.0 48 33.78282919315286 35.0 33.0 39.0 23.0 41.0 49 33.71295913482752 35.0 33.0 39.0 24.0 41.0 50 33.566502913592394 35.0 33.0 39.0 24.0 41.0 51 33.400690490644145 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 7.0 14 15.0 15 65.0 16 204.0 17 500.0 18 1159.0 19 2288.0 20 3709.0 21 5980.0 22 8765.0 23 12720.0 24 17684.0 25 24210.0 26 31788.0 27 37605.0 28 42034.0 29 47325.0 30 55601.0 31 67892.0 32 83601.0 33 108283.0 34 186905.0 35 277215.0 36 132042.0 37 159844.0 38 217772.0 39 344279.0 40 192.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.63856211072988 23.246643151119038 27.806341709967185 14.308453028183893 2 31.94040707391887 25.70416941891281 29.165982505074382 13.189441002093934 3 29.945686038022444 25.35475227110449 30.914833247311712 13.784728443561347 4 26.96475609527808 27.607484683248785 30.62494484365013 14.802814377823001 5 23.983184333189815 32.05047909139775 29.75297978001642 14.213356795396015 6 21.923586058614152 41.699002773194415 26.17366026897579 10.203750899215644 7 86.42776724421493 4.493323741699805 7.130559425785626 1.9483495882996333 8 87.33733222441214 3.6269211123798932 6.92186116912742 2.1138854940805536 9 83.15352586130818 5.291586550675649 8.588612520290852 2.966275067725312 10 52.46049468225931 21.482442229573433 14.197204341907863 11.859858746259397 11 44.96233322725486 21.721466450230924 18.95067885766854 14.365521464845681 12 40.14109328576739 20.334227423336017 24.71844187657279 14.806237414323803 13 22.986706316839467 36.8990498399463 24.68982743082391 15.424416412390324 14 16.853748091256012 40.058084650622966 27.55432064759572 15.533846610525304 15 16.14614226460607 23.091590294621824 45.79905171191939 14.963215728852722 16 17.924784121389433 17.92387487731891 44.63784006396799 19.513500937323666 17 17.50610396938522 18.22189299266989 29.41030173531905 34.86170130262584 18 21.584010140745633 23.17582908350872 34.103070838135835 21.13708993760981 19 29.387891543227866 22.70751490224289 26.788576685377485 21.116016869151753 20 31.688065101875452 21.89053236240329 25.41492283459513 21.00647970112613 21 24.137488400452483 25.73946948282732 28.87411515843578 21.248926958284418 22 23.968582943116086 22.967398251577137 25.500070867552555 27.563947937754218 23 21.40627966743061 27.910049018952392 25.06336628897381 25.620305024643187 24 20.04765508628459 24.16936542786619 36.97569376659705 18.807285719252175 25 20.128149928998734 23.24653618122839 34.717078010467006 21.908235879305874 26 19.19633521154633 31.789151648539725 26.655934020971443 22.358579118942494 27 20.44167867849397 32.49563429133784 27.023856959862226 20.03883007030596 28 17.30425178572861 29.227008827690227 34.85389250060839 18.61484688597277 29 18.840178960627057 24.551889756830697 34.465805737330086 22.14212554521216 30 19.345076844495196 29.20871697638907 30.84327039046684 20.602935788648892 31 28.633860784035814 26.452263349173794 25.18504453958822 19.728831327202176 32 30.14154790780265 25.045983681743184 26.77670302751533 18.035765382938838 33 28.48634930482942 26.93475104095075 24.759571799527727 19.8193278546921 34 21.75601772491088 26.93544634523997 27.460668508331615 23.84786742151753 35 21.63455341407777 25.576928733984598 30.163744160112532 22.62477369182509 36 31.42481220098573 25.105833335561872 24.409566317320834 19.059788146131567 37 22.277923821392374 32.33116808446342 27.220521103822303 18.170386990321898 38 22.323760419535912 31.64629335957661 23.39789857649818 22.632047644389296 39 23.1005222804911 30.177436306115734 25.96875944343566 20.753281969957506 40 24.983513265603563 25.240561912835584 26.49200266355028 23.283922158010572 41 18.479262549573857 25.06999842219411 27.502333280739805 28.948405747492224 42 22.64841403765875 26.679093002297176 24.59457074320006 26.077922216844012 43 23.22369810957461 25.653572660635348 25.63854339099902 25.484185838791024 44 21.049428112222113 29.000232659512164 27.12483653663585 22.825502691629872 45 18.76235836517916 34.64230605690263 24.040680649414206 22.554654928504 46 22.69376927129436 31.565477607190516 25.984751442087838 19.756001679427282 47 23.93702682537433 27.677389506788575 25.82317342226097 22.562410245576125 48 24.559752043793473 24.238949341734035 29.855082540641874 21.346216073830618 49 22.96263809144321 24.970035059381658 30.75095537483587 21.31637147433926 50 21.654877693301277 31.70972650473208 26.129642158973304 20.505753642993337 51 20.803343878781718 32.615066174248604 24.121122007183025 22.46046793978665 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1466.0 1 2908.0 2 4350.0 3 9504.0 4 14658.0 5 11009.0 6 7360.0 7 7561.5 8 7763.0 9 7887.0 10 8011.0 11 8213.0 12 8415.0 13 8153.0 14 7891.0 15 7840.0 16 7789.0 17 7260.5 18 6732.0 19 6717.5 20 6703.0 21 7147.5 22 7592.0 23 7100.0 24 6608.0 25 8631.5 26 11829.5 27 13004.0 28 16776.5 29 20549.0 30 24912.0 31 29275.0 32 29327.0 33 29379.0 34 35676.5 35 41974.0 36 42894.0 37 43814.0 38 55442.0 39 67070.0 40 87655.5 41 108241.0 42 138100.5 43 167960.0 44 171134.5 45 174309.0 46 171075.0 47 167841.0 48 159621.5 49 151402.0 50 142595.0 51 133788.0 52 122230.0 53 110672.0 54 101132.5 55 91593.0 56 88387.5 57 85182.0 58 79775.5 59 74369.0 60 69926.0 61 65483.0 62 58767.5 63 52052.0 64 45863.0 65 39674.0 66 34342.5 67 29011.0 68 25326.5 69 21642.0 70 19089.0 71 16536.0 72 14457.0 73 12378.0 74 10043.5 75 6217.5 76 4726.0 77 3259.5 78 1793.0 79 1416.5 80 1040.0 81 813.0 82 586.0 83 509.0 84 432.0 85 302.5 86 173.0 87 96.5 88 20.0 89 13.5 90 7.0 91 5.0 92 3.0 93 2.0 94 1.0 95 1.5 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1869685.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.581543662695378 #Duplication Level Percentage of deduplicated Percentage of total 1 80.7726973242624 12.585633101116725 2 7.04671657977543 2.1959744413282056 3 2.454219886338961 1.1472160295053742 4 1.2153737757438736 0.7574959821299243 5 0.7358682925858885 0.5732981965460058 6 0.4719549266869434 0.4412271778198082 7 0.3661696655640864 0.3993842042358964 8 0.2605857011448573 0.3248261984210146 9 0.23289052463127913 0.32659144903532783 >10 3.0656289784413624 12.108316125001144 >50 1.5548763061879431 17.680321619029584 >100 1.8064105484386934 48.92160978659629 >500 0.014531553923467706 1.5267449685456158 >1k 0.0017299468956509176 0.6223426524325772 >5k 3.4598937913018346E-4 0.3890180682565383 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7216 0.38594736546530567 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3235 0.17302379812642238 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3042 0.16270120367869453 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2601 0.13911434279036308 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.348494532501464E-5 0.0 0.0 0.02583322859198207 0.0 2 5.348494532501464E-5 0.0 0.0 0.08300863514442272 0.0 3 5.348494532501464E-5 0.0 0.0 0.11574142168333168 0.0 4 5.348494532501464E-5 0.0 0.0 0.1892297365599018 0.0 5 1.0696989065002929E-4 0.0 0.0 0.3119776860808104 0.0 6 1.0696989065002929E-4 0.0 0.0 0.4371859430866697 0.0 7 1.0696989065002929E-4 0.0 0.0 0.5107812278538898 0.0 8 1.0696989065002929E-4 0.0 0.0 0.6973367171475409 0.0 9 2.1393978130005857E-4 0.0 0.0 0.7621604708814587 0.0 10 2.1393978130005857E-4 0.0 0.0 0.8844270558944421 0.0 11 2.1393978130005857E-4 0.0 0.0 1.0172836600817785 0.0 12 2.1393978130005857E-4 0.0 0.0 1.1321693226399099 0.0 13 2.1393978130005857E-4 0.0 0.0 1.1753316735171968 0.0 14 2.1393978130005857E-4 0.0 0.0 1.1897191238096256 0.0 15 2.1393978130005857E-4 0.0 0.0 1.2168359910894082 0.0 16 2.674247266250732E-4 0.0 0.0 1.282622473839176 0.0 17 2.674247266250732E-4 0.0 0.0 1.359480340271222 0.0 18 2.674247266250732E-4 0.0 0.0 1.476024036134429 0.0 19 2.674247266250732E-4 0.0 0.0 1.5276370083730682 0.0 20 2.674247266250732E-4 0.0 0.0 1.5833683214017333 0.0 21 2.674247266250732E-4 0.0 0.0 1.6578728502394788 0.0 22 3.2090967195008783E-4 0.0 0.0 1.7351051112888 0.0 23 3.2090967195008783E-4 0.0 0.0 1.8284363408809505 0.0 24 3.2090967195008783E-4 0.0 0.0 1.9011223815776455 0.0 25 3.2090967195008783E-4 0.0 0.0 1.9606511257243868 0.0 26 3.2090967195008783E-4 0.0 0.0 2.0215704784495783 0.0 27 3.2090967195008783E-4 0.0 0.0 2.080029523689819 0.0 28 3.2090967195008783E-4 0.0 0.0 2.143997518298537 0.0 29 3.2090967195008783E-4 0.0 0.0 2.2123512784239057 0.0 30 3.2090967195008783E-4 0.0 0.0 2.297285371600029 0.0 31 3.2090967195008783E-4 0.0 0.0 2.382059009940177 0.0 32 3.2090967195008783E-4 0.0 0.0 2.4564030839419475 0.0 33 3.743946172751025E-4 0.0 0.0 2.532244736412818 0.0 34 3.743946172751025E-4 0.0 0.0 2.615574281229191 0.0 35 3.743946172751025E-4 0.0 0.0 2.72040477406622 0.0 36 3.743946172751025E-4 0.0 0.0 2.8113826660640697 0.0 37 3.743946172751025E-4 0.0 0.0 2.9059440493986957 0.0 38 3.743946172751025E-4 0.0 0.0 2.9966545166699206 0.0 39 3.743946172751025E-4 0.0 0.0 3.089236957027521 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGC 35 1.2124656E-7 45.000004 15 CTATACG 20 7.0344214E-4 45.000004 1 TTACGTC 20 7.0344214E-4 45.000004 26 CGTGTAA 20 7.0344214E-4 45.000004 41 TGCGTAA 30 2.1662345E-6 45.000004 1 ACGCATT 25 3.8917475E-5 45.0 41 CCGTAAG 25 3.8917475E-5 45.0 1 TATTACG 25 3.8917475E-5 45.0 1 ACGTATG 45 3.8562575E-10 45.0 1 TACGTCC 25 3.8917475E-5 45.0 35 TAATGCG 65 0.0 44.999996 1 GTTTACG 95 0.0 42.63158 1 CTATGCG 90 0.0 42.5 1 ATGACGT 70 0.0 41.785717 31 AATGCGG 205 0.0 41.707317 2 TCGCTAA 65 0.0 41.53846 11 TATCGCG 65 0.0 41.53846 1 TATTGCG 115 0.0 41.08696 1 TGGGCGA 705 0.0 40.531914 6 CGCATGG 100 0.0 40.5 2 >>END_MODULE