##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545535_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1215663 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.303195869249947 31.0 31.0 33.0 30.0 34.0 2 31.64546506721024 31.0 31.0 34.0 30.0 34.0 3 31.748902450761435 31.0 31.0 34.0 30.0 34.0 4 35.458021672124595 37.0 35.0 37.0 33.0 37.0 5 35.316442961577344 37.0 35.0 37.0 33.0 37.0 6 35.3967917095445 37.0 35.0 37.0 33.0 37.0 7 35.82901840394912 37.0 35.0 37.0 35.0 37.0 8 35.85275113250959 37.0 35.0 37.0 35.0 37.0 9 37.5221093345771 39.0 37.0 39.0 35.0 39.0 10 36.89423878163603 39.0 37.0 39.0 32.0 39.0 11 36.52519242586144 39.0 35.0 39.0 32.0 39.0 12 35.773824653707486 37.0 35.0 39.0 31.0 39.0 13 35.44773674941164 37.0 35.0 39.0 30.0 39.0 14 36.42712906455161 38.0 35.0 41.0 31.0 41.0 15 36.6384285776568 38.0 35.0 41.0 31.0 41.0 16 36.80114225735257 38.0 35.0 41.0 32.0 41.0 17 36.74386651563797 38.0 35.0 41.0 32.0 41.0 18 36.69023158556278 38.0 35.0 40.0 31.0 41.0 19 36.63579544659992 38.0 35.0 40.0 31.0 41.0 20 36.48979610303184 38.0 35.0 40.0 31.0 41.0 21 36.314625846143215 38.0 35.0 40.0 31.0 41.0 22 36.23335003204013 38.0 35.0 40.0 30.0 41.0 23 36.165199565998144 38.0 35.0 40.0 30.0 41.0 24 36.105015123434704 37.0 35.0 40.0 30.0 41.0 25 35.986799795667054 37.0 34.0 40.0 30.0 41.0 26 35.92008558292882 37.0 34.0 40.0 30.0 41.0 27 35.86324088172462 37.0 34.0 40.0 30.0 41.0 28 35.835773565535845 37.0 34.0 40.0 30.0 41.0 29 35.83471488397689 37.0 34.0 40.0 30.0 41.0 30 35.738731868947234 37.0 34.0 40.0 30.0 41.0 31 35.58090770221681 37.0 34.0 40.0 29.0 41.0 32 35.40148215418253 37.0 34.0 40.0 29.0 41.0 33 35.2391550947919 37.0 34.0 40.0 27.0 41.0 34 35.05902787203362 37.0 34.0 40.0 27.0 41.0 35 34.921907633941316 36.0 34.0 40.0 26.0 41.0 36 34.75506287515537 36.0 33.0 40.0 25.0 41.0 37 34.68742488666678 36.0 33.0 40.0 25.0 41.0 38 34.66571492263892 36.0 33.0 40.0 26.0 41.0 39 34.60691984538478 36.0 33.0 40.0 25.0 41.0 40 34.45892241517592 36.0 33.0 40.0 24.0 41.0 41 34.40835988263195 36.0 33.0 40.0 24.0 41.0 42 34.31205770020146 36.0 33.0 40.0 24.0 41.0 43 34.24318417192923 35.0 33.0 40.0 24.0 41.0 44 34.17735013733247 35.0 33.0 40.0 24.0 41.0 45 34.15134128455008 35.0 33.0 40.0 23.0 41.0 46 34.108825389931255 35.0 33.0 40.0 23.0 41.0 47 34.053691689226376 35.0 33.0 40.0 23.0 41.0 48 33.997796264260735 35.0 33.0 40.0 23.0 41.0 49 33.92875657151694 35.0 33.0 39.0 24.0 41.0 50 33.784979060808794 35.0 33.0 39.0 24.0 41.0 51 33.64486786222827 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 5.0 14 11.0 15 54.0 16 114.0 17 357.0 18 730.0 19 1346.0 20 2228.0 21 3708.0 22 5453.0 23 7867.0 24 11147.0 25 15382.0 26 19757.0 27 23628.0 28 26536.0 29 30304.0 30 35317.0 31 43082.0 32 53148.0 33 68297.0 34 113837.0 35 169033.0 36 87382.0 37 107215.0 38 147353.0 39 242234.0 40 135.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.20794825539644 22.917535534107724 27.383082318043733 14.491433892452102 2 32.20300362847269 25.181567589044 28.800744943294315 13.814683839188985 3 30.237245025965255 25.654725034816394 30.526552177700562 13.581477761517787 4 27.01168004619701 28.017057358823948 29.469844850094145 15.50141774488489 5 23.036318453387164 32.215342574381225 29.86633631195488 14.882002660276738 6 21.150680739645775 42.23793929732171 26.165557395429488 10.445822567603027 7 86.01462740907635 4.686742954256237 7.128291310996551 2.170338325670848 8 86.87753102627948 3.8849582491200274 7.3066302091944895 1.9308805154059965 9 82.72703866120791 5.257707111263565 8.751520775083225 3.263733452445291 10 48.74640422551316 23.89305259763602 15.111753833093546 12.248789343757274 11 42.20371928733539 22.340319644506742 21.011086131600617 14.444874936557254 12 38.4996499852344 21.349749066970038 25.73945246338829 14.411148484407274 13 23.11948294881065 35.94738015387488 25.109179106380637 15.823957790933838 14 17.017545158485532 38.25599693336064 28.245821415968074 16.480636492185745 15 16.17463063365423 24.20382951525217 43.96621432090966 15.655325530183942 16 18.289196923818526 19.47365347139791 42.65499566902999 19.582153935753578 17 18.10699182256925 19.497097468624116 30.18451659711614 32.211394111690495 18 21.594636013434645 23.239088464483988 33.60775149033902 21.558524031742348 19 29.04151890778941 23.87947975713664 26.382887362698384 20.696113972375567 20 30.075933873121087 22.580435531886714 26.680502738012095 20.6631278569801 21 24.03190686892667 26.236547464223225 28.52624452664924 21.20530114020086 22 23.246820870586667 24.452829443686287 25.714116494456114 26.586233191270935 23 20.71947570996238 28.759368344681054 26.470164840091375 24.050991105265194 24 20.075629512455343 24.16985628418402 37.568717646255585 18.185796557105053 25 19.331591074171047 25.143563635645734 34.52519324845784 20.99965204172538 26 18.603840044486013 31.737249550245423 27.837566825674546 21.821343579594014 27 18.814260202046125 32.41844162403561 28.338857068118383 20.42844110579988 28 16.794292497180553 28.689612170478167 35.4631999164242 19.052895415917074 29 17.971756975411772 24.824807533008737 34.7326520589999 22.470783432579587 30 19.75333624532457 30.38991891667345 29.676316544963534 20.18042829303845 31 27.4362220450898 26.778885266722767 25.827141238978236 19.957751449209198 32 28.398495306676274 25.614500071154588 27.620648156602613 18.36635646556653 33 27.64121306645016 27.759749206811428 25.38154077240156 19.217496954336852 34 19.86973363506169 27.941378490584974 28.38327727338909 23.805610600964247 35 21.522083011492494 25.093549774896495 31.409280367996722 21.975086845614285 36 29.486214518332794 26.07663472524869 25.922644680310253 18.514506076108265 37 21.812953096376216 31.895928394629102 27.820374561041998 18.47074394795268 38 20.88489984477606 31.81449135163281 25.620175986272507 21.680432817318614 39 21.642017565723396 31.107716529992274 26.555632605417784 20.694633298866545 40 23.796726559910105 26.193361153543375 26.628514645917495 23.38139764062902 41 18.630738946566606 25.651105610683224 27.6677006703338 28.050454772416366 42 21.799627034795005 26.472714888912467 25.07701558737907 26.650642488913455 43 21.58460033742904 26.20701625368215 27.030517503617368 25.177865905271446 44 20.21374344699148 28.77878161957714 28.82764384537491 22.179831088056474 45 18.47847635405536 35.288727221277604 24.159573829260246 22.073222595406786 46 21.222246625915243 32.672788429030085 26.437096465056513 19.66786847999816 47 22.427021304424006 28.34025548198802 26.586726749107275 22.6459964644807 48 22.063269179040574 25.60471117406716 30.25229853997366 22.079721106918612 49 21.75175192466991 25.403586355758133 31.798039423754776 21.04662229581718 50 20.16348280732407 31.607526098927085 27.37724188364703 20.851749210101815 51 19.511410645878012 31.674320926111925 25.89772000957502 22.916548418435042 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 691.0 1 1738.0 2 2785.0 3 6033.5 4 9282.0 5 7038.0 6 4794.0 7 4856.0 8 4918.0 9 5069.5 10 5221.0 11 5579.0 12 5937.0 13 5875.5 14 5814.0 15 5678.5 16 5543.0 17 5205.0 18 4867.0 19 4879.5 20 4892.0 21 4996.0 22 5100.0 23 6014.0 24 6928.0 25 8062.5 26 10402.5 27 11608.0 28 13675.5 29 15743.0 30 16878.0 31 18013.0 32 23262.5 33 28512.0 34 32853.5 35 37195.0 36 38853.5 37 40512.0 38 43732.5 39 46953.0 40 61972.5 41 76992.0 42 89339.5 43 101687.0 44 106944.5 45 112202.0 46 108335.0 47 104468.0 48 95850.0 49 87232.0 50 85608.0 51 83984.0 52 77958.5 53 71933.0 54 64035.5 55 56138.0 56 52610.0 57 49082.0 58 46931.0 59 44780.0 60 43922.5 61 43065.0 62 37795.5 63 32526.0 64 28568.5 65 24611.0 66 20584.0 67 16557.0 68 14195.0 69 11833.0 70 10534.5 71 9236.0 72 7843.0 73 6450.0 74 5251.5 75 3072.5 76 2092.0 77 1691.0 78 1290.0 79 915.0 80 540.0 81 390.5 82 241.0 83 164.0 84 87.0 85 69.0 86 51.0 87 31.5 88 12.0 89 9.5 90 7.0 91 6.5 92 6.0 93 4.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1215663.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.66739310459396 #Duplication Level Percentage of deduplicated Percentage of total 1 79.64529613932037 14.071247558251725 2 6.32939363818651 2.2364777103911444 3 2.2220488384616965 1.1777343098012758 4 1.168484807678317 0.8257632173599477 5 0.7525078112524143 0.6647425657836998 6 0.53248618673801 0.5644585670319989 7 0.43248755869452665 0.5348649398611649 8 0.34906390548777094 0.4933639389501826 9 0.2965261325266486 0.47149593742199036 >10 5.049468564091517 22.631639299122295 >50 2.047491986924968 25.65083849493493 >100 1.1691258841375958 29.338287671026382 >500 0.003277485458135031 0.4016099277710101 >1k 0.002341061041525022 0.9374758622922468 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4625 0.3804508321796419 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3225 0.26528733703337193 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019906832732426667 0.0 2 0.0 0.0 0.0 0.07288204049971085 0.0 3 0.0 0.0 0.0 0.10743108904359185 0.0 4 0.0 0.0 0.0 0.16624673120757974 0.0 5 0.0 0.0 0.0 0.2733487816936108 0.0 6 0.0 0.0 0.0 0.3760088116525715 0.0 7 0.0 0.0 0.0 0.4373745026376553 0.0 8 0.0 0.0 0.0 0.5811643522917124 0.0 9 0.0 0.0 0.0 0.6320830690742418 0.0 10 0.0 0.0 0.0 0.7297252610304007 0.0 11 0.0 0.0 0.0 0.8580502984791015 0.0 12 0.0 0.0 0.0 0.9665507628347659 0.0 13 0.0 0.0 0.0 1.008832217481325 0.0 14 0.0 0.0 0.0 1.0264357803108262 0.0 15 0.0 0.0 0.0 1.05366372094898 0.0 16 0.0 0.0 0.0 1.1170036432794286 0.0 17 0.0 0.0 0.0 1.1898856837791394 0.0 18 0.0 0.0 0.0 1.2922166751805393 0.0 19 0.0 0.0 0.0 1.3391046696329492 0.0 20 0.0 0.0 0.0 1.3867330008398708 0.0 21 0.0 0.0 0.0 1.4573940310760465 0.0 22 0.0 0.0 0.0 1.5347180921028278 0.0 23 0.0 0.0 0.0 1.6187051839202147 0.0 24 0.0 0.0 0.0 1.6878032810079766 0.0 25 0.0 0.0 0.0 1.7473592599264762 0.0 26 0.0 0.0 0.0 1.8014861026452231 0.0 27 0.0 0.0 0.0 1.855941983921531 0.0 28 0.0 0.0 0.0 1.9142640682491776 0.0 29 8.225963939019284E-5 0.0 0.0 1.9760410574312124 0.0 30 8.225963939019284E-5 0.0 0.0 2.055174830524578 0.0 31 8.225963939019284E-5 0.0 0.0 2.1380925470298924 0.0 32 8.225963939019284E-5 0.0 0.0 2.214347232744601 0.0 33 8.225963939019284E-5 0.0 0.0 2.2878873503594335 0.0 34 8.225963939019284E-5 0.0 0.0 2.3655404499437753 0.0 35 1.6451927878038567E-4 0.0 0.0 2.4682827395421265 0.0 36 2.4677891817057854E-4 0.0 0.0 2.5541618030654876 0.0 37 2.4677891817057854E-4 0.0 0.0 2.6453877431492114 0.0 38 2.4677891817057854E-4 0.0 0.0 2.7328297398209864 0.0 39 2.4677891817057854E-4 0.0 0.0 2.8210943328866636 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTC 20 7.033448E-4 45.0 32 TTCTACG 25 3.89094E-5 45.0 34 CAAACGA 20 7.033448E-4 45.0 29 GTCGACG 20 7.033448E-4 45.0 1 GACGTAG 55 1.8189894E-12 45.0 1 TAGAACG 55 1.8189894E-12 45.0 1 CTAAGCG 25 3.89094E-5 45.0 1 TGACGTA 25 3.89094E-5 45.0 39 CGTAGGA 20 7.033448E-4 45.0 16 TCGCTAA 20 7.033448E-4 45.0 15 TCGTAGC 35 1.2120108E-7 45.0 44 ACCCGTG 25 3.89094E-5 45.0 20 AATACGG 100 0.0 45.0 2 AGTACGT 20 7.033448E-4 45.0 2 GTTTACG 30 2.165607E-6 44.999996 1 TCGTATA 30 2.165607E-6 44.999996 29 TTACGAG 30 2.165607E-6 44.999996 1 ACGTAAG 60 0.0 44.999996 1 ACGGGTA 90 0.0 42.5 5 GTTACGG 145 0.0 41.89655 2 >>END_MODULE