##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545534_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1975057 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.332863811019124 31.0 31.0 33.0 30.0 34.0 2 31.656620036788812 31.0 31.0 34.0 30.0 34.0 3 31.71713221441204 31.0 31.0 34.0 30.0 34.0 4 35.40741608976349 37.0 35.0 37.0 33.0 37.0 5 35.275738371095116 37.0 35.0 37.0 33.0 37.0 6 35.358683319013075 37.0 35.0 37.0 33.0 37.0 7 35.87540815277736 37.0 35.0 37.0 35.0 37.0 8 35.91893702308339 37.0 35.0 37.0 35.0 37.0 9 37.614725549693 39.0 37.0 39.0 35.0 39.0 10 36.95073053587821 39.0 37.0 39.0 32.0 39.0 11 36.51181813993217 39.0 35.0 39.0 32.0 39.0 12 35.394057487961106 37.0 35.0 39.0 31.0 39.0 13 34.84897600423684 37.0 34.0 39.0 29.0 39.0 14 35.7407426722368 37.0 34.0 40.0 29.0 41.0 15 36.113290401239055 37.0 35.0 40.0 31.0 41.0 16 36.37568637259583 37.0 35.0 40.0 32.0 41.0 17 36.31553266563952 37.0 35.0 40.0 31.0 41.0 18 36.27260428433205 37.0 35.0 40.0 31.0 41.0 19 36.219317214642416 36.0 35.0 40.0 31.0 41.0 20 36.02367526608093 36.0 35.0 40.0 31.0 41.0 21 35.78794029741926 36.0 34.0 40.0 30.0 41.0 22 35.72017769613738 35.0 34.0 40.0 30.0 41.0 23 35.71465684281517 35.0 34.0 40.0 30.0 41.0 24 35.64997465895921 35.0 34.0 40.0 30.0 41.0 25 35.560172187435604 35.0 34.0 40.0 30.0 41.0 26 35.463171442646974 35.0 34.0 40.0 30.0 41.0 27 35.37531980089688 35.0 34.0 40.0 30.0 41.0 28 35.41758491020766 36.0 34.0 40.0 30.0 41.0 29 35.464283815606336 36.0 34.0 40.0 30.0 41.0 30 35.3759876297241 36.0 34.0 40.0 30.0 41.0 31 35.155541333743784 35.0 34.0 40.0 29.0 41.0 32 34.92777828690514 35.0 34.0 40.0 29.0 41.0 33 34.72939818952061 35.0 34.0 40.0 27.0 41.0 34 34.580111358811415 35.0 34.0 40.0 27.0 41.0 35 34.42618415569778 35.0 33.0 40.0 26.0 41.0 36 34.18829532514758 35.0 33.0 40.0 24.0 41.0 37 34.10997302862651 35.0 33.0 40.0 24.0 41.0 38 34.135285715804656 35.0 33.0 40.0 24.0 41.0 39 34.11340077780034 35.0 33.0 40.0 24.0 41.0 40 33.92683907350522 35.0 33.0 40.0 23.0 41.0 41 33.95133507539276 35.0 33.0 40.0 23.0 41.0 42 33.87969005451488 35.0 33.0 39.0 23.0 41.0 43 33.755897677889806 35.0 33.0 39.0 23.0 41.0 44 33.72932629286142 35.0 33.0 39.0 23.0 41.0 45 33.63762767353043 35.0 33.0 39.0 23.0 41.0 46 33.62963600544187 35.0 33.0 39.0 23.0 41.0 47 33.5749773297682 35.0 33.0 39.0 23.0 41.0 48 33.57643905973347 35.0 33.0 39.0 23.0 41.0 49 33.54631942267995 35.0 33.0 39.0 24.0 41.0 50 33.393360799207315 35.0 33.0 39.0 23.0 41.0 51 33.23888880169028 35.0 32.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 0.0 13 9.0 14 22.0 15 62.0 16 191.0 17 512.0 18 1144.0 19 2304.0 20 3998.0 21 6309.0 22 9524.0 23 14163.0 24 19668.0 25 27636.0 26 35661.0 27 41386.0 28 45388.0 29 51804.0 30 60539.0 31 74337.0 32 93058.0 33 121168.0 34 213061.0 35 350423.0 36 126867.0 37 144823.0 38 200639.0 39 330144.0 40 214.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.3365857289182 23.971915747241727 29.846581642960178 13.844916880879893 2 30.89227298250126 26.55634748769276 29.712712088815664 12.838667440990312 3 28.709399273033636 24.05728037216141 32.93560641540979 14.297713939395168 4 25.291472600537606 28.425255574902398 30.755669330049717 15.527602494510283 5 22.209485599656112 32.63419739278411 30.242063899927953 14.914253107631831 6 20.841778237286317 41.73818780926323 26.434781375929912 10.985252577520548 7 86.69795352741718 4.626296861305775 6.95934345185987 1.7164061594171713 8 88.0671798332909 3.630173711442252 6.564975086794964 1.7376713684718972 9 84.26222635599883 5.239038670782667 7.993389557870987 2.5053454153475063 10 54.711281750349485 22.726483336936603 12.816895917434282 9.74533899527963 11 49.57426545157937 20.383057299105797 18.71571301486489 11.326964234449942 12 45.76369188332286 20.284325971351713 22.088628328195085 11.863353817130342 13 20.558444642357156 45.21565706711249 22.174600530516333 12.051297760014016 14 14.002178164984604 47.475693106578696 26.12299290602752 12.399135822409175 15 12.775985705729 22.89463038281933 51.92923546003989 12.400148451411782 16 13.931901712203748 18.106566038347246 50.38831790677434 17.573214342674667 17 14.252196265728026 18.285193794406947 28.816788578760004 38.64582136110502 18 19.541917018091123 23.263126076867653 36.95837639116238 20.23658051387884 19 29.887188065964676 24.24760399320121 25.74644681140848 20.118761129425632 20 32.56290831100064 22.15525931656656 25.733485160175125 19.54834721225767 21 20.542850155717023 29.379253358257508 28.95708832707107 21.1208081589544 22 21.308954627638595 25.373748706999343 24.548709227126103 28.76858743823596 23 17.531038344716126 32.951504690750696 24.162897577133215 25.35455938739996 24 18.028694868046845 23.544890096842774 42.444901590181956 15.981513444928424 25 14.997592474546304 25.897379164246903 38.79493098173876 20.310097379468036 26 15.76627915042452 36.74921787067411 27.394500513149744 20.09000246575162 27 16.038828246475926 38.34486802153052 27.184734415259914 18.431569316733643 28 12.49265211079984 31.172163638821566 39.681285147719784 16.65389910265881 29 14.04688573544966 24.15666990876719 39.6876647104362 22.108779645346942 30 16.980471955999242 33.5301715342899 32.04267016091181 17.446686348799048 31 29.871694842224805 28.425306206352523 23.817135404193397 17.88586354722927 32 30.896931075913255 26.422629827898636 26.33103753461293 16.349401561575185 33 29.358899515305126 28.82357319307747 23.925993021973543 17.891534269643863 34 19.132257955086864 28.363485205743427 27.660619415034603 24.8436374241351 35 19.831832701537223 25.83733026439237 31.889256867017004 22.441580167053406 36 33.02851512639889 24.569063070078485 26.098132864013547 16.30428893950909 37 19.714671525935707 35.34029650789826 28.64985668768041 16.295175278485633 38 19.749759120876003 34.89230943714536 23.44291835628035 21.915013085698288 39 19.863224200618006 33.10031052268365 28.432343977920638 18.604121298777706 40 23.926347442124456 26.41736415708509 26.141270859524564 23.515017541265898 41 16.17295095787109 25.21203185528316 27.765780936955238 30.84923624989051 42 21.269917779588134 25.52245327603203 24.830321352750833 28.377307591629002 43 21.271234197291523 25.8179890504426 27.316933131550126 25.593843620715756 44 18.80381173809161 30.996421875419294 29.75007809901183 20.449688287477272 45 16.061106084533254 40.83254306078255 21.946607110579595 21.1597437441046 46 21.210577720035424 36.01065690762342 25.226411187120167 17.552354185220985 47 21.20374247426783 29.40958159688556 26.243191968636854 23.143483960209757 48 22.93493301712305 24.510279956477206 31.670174582303197 20.88461244409655 49 21.210729614385812 23.796629666890627 34.18584881347728 20.80679190524628 50 18.9236057490999 36.4878583251015 25.656424093076808 18.93211183272179 51 18.123122522539855 35.85678793067744 23.472892174757487 22.547197372025213 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2383.0 1 3070.0 2 3757.0 3 9000.5 4 14244.0 5 10633.0 6 7022.0 7 7760.0 8 8498.0 9 9508.0 10 10518.0 11 11470.5 12 12423.0 13 12545.5 14 12668.0 15 12153.0 16 11638.0 17 10888.5 18 10139.0 19 10116.5 20 10094.0 21 9537.0 22 8980.0 23 9359.0 24 9738.0 25 11214.5 26 13094.0 27 13497.0 28 17512.0 29 21527.0 30 27554.0 31 33581.0 32 36194.0 33 38807.0 34 46967.0 35 55127.0 36 56304.5 37 57482.0 38 69788.5 39 82095.0 40 113860.5 41 145626.0 42 177550.5 43 209475.0 44 222215.5 45 234956.0 46 221510.0 47 208064.0 48 188916.0 49 169768.0 50 156127.0 51 142486.0 52 124440.5 53 106395.0 54 93795.0 55 81195.0 56 71043.5 57 60892.0 58 56554.5 59 52217.0 60 44367.0 61 36517.0 62 33597.0 63 30677.0 64 24552.5 65 18428.0 66 14969.5 67 11511.0 68 10258.5 69 9006.0 70 8104.5 71 7203.0 72 6131.0 73 5059.0 74 4366.0 75 2879.0 76 2085.0 77 1590.5 78 1096.0 79 1022.0 80 948.0 81 790.0 82 632.0 83 379.5 84 127.0 85 86.0 86 45.0 87 36.0 88 27.0 89 22.5 90 18.0 91 11.0 92 4.0 93 4.0 94 4.0 95 8.5 96 13.0 97 7.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1975057.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.22026249804573 #Duplication Level Percentage of deduplicated Percentage of total 1 79.66091525977012 13.717818716078181 2 8.547851871939143 2.9439250605840726 3 2.9963193431333823 1.5479221685018638 4 1.5974339078803734 1.1003292486791614 5 0.9550418394408285 0.8223035585893755 6 0.6101814446484504 0.6304490788969846 7 0.45332574224390887 0.5464471794993071 8 0.3220042823489357 0.44359986140348046 9 0.2688222543955914 0.41662708074076604 >10 2.3203884048939627 8.964114499996159 >50 0.7748697823613343 9.721743374672913 >100 1.4679552252562416 55.10994538798498 >500 0.022520104384214975 2.555513844988808 >1k 0.001777902977701182 0.4333178301913853 >5k 2.96317162950197E-4 0.43750201084090173 >10k+ 2.96317162950197E-4 0.6084410983516343 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 11924 0.6037294113536976 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8574 0.4341140534171925 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05478322904098464 0.0 2 0.0 0.0 0.0 0.18267827207012252 0.0 3 0.0 0.0 0.0 0.24566379603221578 0.0 4 0.0 0.0 0.0 0.36550843849063597 0.0 5 0.0 0.0 0.0 0.6065647725609944 0.0 6 5.0631450130300035E-5 0.0 0.0 0.8503552049383891 0.0 7 1.0126290026060007E-4 0.0 0.0 0.9948573636102654 0.0 8 1.0126290026060007E-4 0.0 0.0 1.3437080550080327 0.0 9 1.0126290026060007E-4 0.0 0.0 1.489729157183818 0.0 10 1.0126290026060007E-4 0.0 0.0 1.78708766379907 0.0 11 1.0126290026060007E-4 0.0 0.0 2.197506198555282 0.0 12 1.518943503909001E-4 0.0 0.0 2.497041857526137 0.0 13 1.518943503909001E-4 0.0 0.0 2.611418303370485 0.0 14 1.518943503909001E-4 0.0 0.0 2.6506070457713373 0.0 15 1.518943503909001E-4 0.0 0.0 2.713845726984082 0.0 16 1.518943503909001E-4 0.0 0.0 2.8705500651373606 0.0 17 1.518943503909001E-4 0.0 0.0 3.0556586468137374 0.0 18 1.518943503909001E-4 0.0 0.0 3.304259066953511 0.0 19 1.518943503909001E-4 0.0 0.0 3.4275972794709215 0.0 20 1.518943503909001E-4 0.0 0.0 3.5459229784254327 0.0 21 1.518943503909001E-4 0.0 0.0 3.6977666973662027 0.0 22 1.518943503909001E-4 0.0 0.0 3.859837969233293 0.0 23 1.518943503909001E-4 0.0 0.0 4.054870315135209 0.0 24 1.518943503909001E-4 0.0 0.0 4.1990180536561725 0.0 25 1.518943503909001E-4 0.0 0.0 4.310356612492702 0.0 26 1.518943503909001E-4 0.0 0.0 4.422404011631056 0.0 27 1.518943503909001E-4 0.0 0.0 4.531767943912505 0.0 28 1.518943503909001E-4 0.0 0.0 4.653739107276397 0.0 29 1.518943503909001E-4 0.0 0.0 4.784317617162442 0.0 30 1.518943503909001E-4 0.0 0.0 4.959299908812758 0.0 31 1.518943503909001E-4 0.0 0.0 5.11144741645431 0.0 32 1.518943503909001E-4 0.0 0.0 5.240557614286575 0.0 33 1.518943503909001E-4 0.0 0.0 5.378275158640991 0.0 34 2.0252580052120014E-4 0.0 0.0 5.521663425410001 0.0 35 2.0252580052120014E-4 0.0 0.0 5.704898643431557 0.0 36 2.0252580052120014E-4 0.0 0.0 5.864894025843305 0.0 37 2.0252580052120014E-4 0.0 0.0 6.024534988104141 0.0 38 2.0252580052120014E-4 0.0 0.0 6.1836190044135435 0.0 39 2.0252580052120014E-4 0.0 0.0 6.34158912882008 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCTAG 65 0.0 45.000004 25 CGTATTA 50 2.1827873E-11 45.0 31 ACGCACG 20 7.034521E-4 45.0 14 CTATACG 25 3.8918282E-5 45.0 17 ATTAACG 50 2.1827873E-11 45.0 1 GTTAGCG 70 0.0 45.0 1 CGTTCCA 25 3.8918282E-5 45.0 41 ATCGTTC 35 1.2125201E-7 45.0 16 ATACTCC 25 3.8918282E-5 45.0 37 TGCATCG 20 7.034521E-4 45.0 24 TAGCACG 25 3.8918282E-5 45.0 1 CCGTATT 50 2.1827873E-11 45.0 30 CGGATTA 20 7.034521E-4 45.0 19 CGGTGAT 20 7.034521E-4 45.0 43 TTACGTC 20 7.034521E-4 45.0 32 CGTAAGA 20 7.034521E-4 45.0 2 CCGAACG 20 7.034521E-4 45.0 26 GTAAGAC 25 3.8918282E-5 45.0 29 TCGACAT 35 1.2125201E-7 45.0 34 TCGACAC 20 7.034521E-4 45.0 23 >>END_MODULE