SRR1545533_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545533_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1396664
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	6261	0.448282478820962	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4887	0.34990520268296454	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCTCGC	45	3.8562575E-10	45.000004	23
GCTATCG	30	2.165838E-6	45.000004	38
GAACGAT	30	2.165838E-6	45.000004	43
CGTCGCA	30	2.165838E-6	45.000004	45
CGACTGG	45	3.8562575E-10	45.000004	2
CCGTTAT	30	2.165838E-6	45.000004	39
TACACGG	30	2.165838E-6	45.000004	2
GACTAAC	30	2.165838E-6	45.000004	9
TCGCAAA	20	7.033809E-4	45.0	30
CGTTGTA	20	7.033809E-4	45.0	25
GATCCGA	20	7.033809E-4	45.0	44
CGTTATT	20	7.033809E-4	45.0	18
TGCGCAA	20	7.033809E-4	45.0	37
ACGTGTA	20	7.033809E-4	45.0	31
TCGCTAA	20	7.033809E-4	45.0	26
TATTACG	20	7.033809E-4	45.0	1
TTGCGAA	20	7.033809E-4	45.0	28
CTCGCTA	20	7.033809E-4	45.0	25
TCGTACT	20	7.033809E-4	45.0	18
TATAGCG	80	0.0	45.0	1